From 2a9fbd70d4fc47ed41e0ad25fb90e241865a341b Mon Sep 17 00:00:00 2001
From: Guilhem Saurel <guilhem.saurel@laas.fr>
Date: Wed, 27 Jul 2022 22:44:21 +0200
Subject: [PATCH] pre-commit run -a

---
 .gitignore                                    |   2 +-
 INSTALL                                       |   2 +-
 NEWS                                          |   1 -
 doc/pictures/feature.fig                      |   2 +-
 doc/pictures/task.fig                         |   2 +-
 .../core/abstract-sot-external-interface.hh   |  25 +-
 include/sot/core/additional-functions.hh      |   6 +-
 .../sot/core/admittance-control-op-point.hh   |  18 +-
 include/sot/core/binary-int-to-uint.hh        |   7 +-
 include/sot/core/binary-op.hh                 |  19 +-
 include/sot/core/causal-filter.hh             |  10 +-
 include/sot/core/clamp-workspace.hh           |   9 +-
 include/sot/core/com-freezer.hh               |  12 +-
 include/sot/core/contiifstream.hh             |   8 +-
 include/sot/core/control-gr.hh                |  23 +-
 include/sot/core/control-pd.hh                |  23 +-
 include/sot/core/debug.hh                     | 160 ++++++------
 include/sot/core/derivator-impl.hh            |  12 +-
 include/sot/core/derivator.hh                 |  31 +--
 include/sot/core/device.hh                    |  28 +-
 include/sot/core/double-constant.hh           |   9 +-
 include/sot/core/event.hh                     |  39 +--
 include/sot/core/exception-abstract.hh        |  30 +--
 include/sot/core/exception-dynamic.hh         |   7 +-
 include/sot/core/exception-factory.hh         |   9 +-
 include/sot/core/exception-feature.hh         |   5 +-
 include/sot/core/exception-signal.hh          |   7 +-
 include/sot/core/exception-task.hh            |   5 +-
 include/sot/core/exception-tools.hh           |  11 +-
 include/sot/core/exp-moving-avg.hh            |   7 +-
 include/sot/core/factory.hh                   |   4 +-
 include/sot/core/feature-1d.hh                |  11 +-
 include/sot/core/feature-abstract.hh          |  83 +++---
 include/sot/core/feature-generic.hh           |  11 +-
 include/sot/core/feature-joint-limits.hh      |  13 +-
 include/sot/core/feature-line-distance.hh     |  11 +-
 include/sot/core/feature-point6d-relative.hh  |  13 +-
 include/sot/core/feature-point6d.hh           |  26 +-
 include/sot/core/feature-pose.hh              |  19 +-
 include/sot/core/feature-pose.hxx             |  37 ++-
 include/sot/core/feature-posture.hh           |  19 +-
 include/sot/core/feature-task.hh              |  11 +-
 include/sot/core/feature-vector3.hh           |  11 +-
 include/sot/core/feature-visual-point.hh      |  11 +-
 include/sot/core/filter-differentiator.hh     |  23 +-
 include/sot/core/fir-filter-impl.hh           |  18 +-
 include/sot/core/fir-filter.hh                | 111 ++++----
 include/sot/core/flags.hh                     |  11 +-
 include/sot/core/fwd.hh                       |   6 +-
 include/sot/core/gain-adaptive.hh             |  25 +-
 include/sot/core/gain-hyperbolic.hh           |  23 +-
 include/sot/core/gradient-ascent.hh           |   7 +-
 include/sot/core/gripper-control.hh           |  27 +-
 include/sot/core/integrator-abstract-impl.hh  |  18 +-
 include/sot/core/integrator-abstract.hh       |   9 +-
 include/sot/core/integrator-euler-impl.hh     |  20 +-
 include/sot/core/integrator-euler.hh          |  17 +-
 include/sot/core/joint-limitator.hh           |   9 +-
 include/sot/core/joint-trajectory-entity.hh   |  17 +-
 include/sot/core/kalman.hh                    |  41 +--
 include/sot/core/latch.hh                     |  13 +-
 include/sot/core/macros-signal.hh             | 152 +++++------
 include/sot/core/macros.hh                    |   8 +-
 include/sot/core/madgwickahrs.hh              |  20 +-
 include/sot/core/mailbox-vector.hh            |  12 +-
 include/sot/core/mailbox.hh                   |  21 +-
 include/sot/core/mailbox.hxx                  |  52 ++--
 include/sot/core/matrix-constant.hh           |  10 +-
 include/sot/core/matrix-geometry.hh           |  48 ++--
 include/sot/core/matrix-svd.hh                |   5 +-
 include/sot/core/memory-task-sot.hh           |  18 +-
 include/sot/core/motion-period.hh             |  12 +-
 include/sot/core/multi-bound.hh               |  18 +-
 include/sot/core/neck-limitation.hh           |  20 +-
 include/sot/core/op-point-modifier.hh         |  11 +-
 include/sot/core/parameter-server.hh          |  37 +--
 include/sot/core/periodic-call-entity.hh      |  12 +-
 include/sot/core/periodic-call.hh             |  11 +-
 include/sot/core/pool.hh                      |  12 +-
 include/sot/core/reader.hh                    |   9 +-
 include/sot/core/robot-simu.hh                |  11 +-
 include/sot/core/robot-utils.hh               |  26 +-
 include/sot/core/sequencer.hh                 |  27 +-
 include/sot/core/smooth-reach.hh              |  12 +-
 include/sot/core/sot-loader.hh                |   4 +-
 include/sot/core/sot.hh                       |  23 +-
 include/sot/core/stop-watch.hh                |  22 +-
 include/sot/core/switch.hh                    |  20 +-
 include/sot/core/task-abstract.hh             |  23 +-
 include/sot/core/task-conti.hh                |  11 +-
 include/sot/core/task-pd.hh                   |   6 +-
 include/sot/core/task-unilateral.hh           |  11 +-
 include/sot/core/task.hh                      |  11 +-
 include/sot/core/time-stamp.hh                |  13 +-
 include/sot/core/timer.hh                     |  27 +-
 include/sot/core/trajectory.hh                |  92 ++++---
 include/sot/core/unary-op.hh                  |  18 +-
 include/sot/core/utils-windows.hh             |   4 +-
 include/sot/core/variadic-op.hh               |  30 +--
 include/sot/core/vector-constant.hh           |  13 +-
 include/sot/core/vector-to-rotation.hh        |  10 +-
 include/sot/core/visual-point-projecter.hh    |  15 +-
 src/control/admittance-control-op-point.cpp   |  41 ++-
 src/control/control-gr.cpp                    |   6 +-
 src/control/control-pd.cpp                    |  20 +-
 src/debug/contiifstream.cpp                   |   5 +-
 src/debug/debug.cpp                           |  24 +-
 src/dynamic_graph/__init__.py                 |   2 +-
 .../sot/core/feature_position.py              |  44 ++--
 .../sot/core/feature_position_relative.py     |  81 +++---
 .../sot/core/math_small_entities.py           |  64 ++++-
 src/dynamic_graph/sot/core/matrix_util.py     |  53 ++--
 src/dynamic_graph/sot/core/meta_task_6d.py    |  47 ++--
 .../sot/core/meta_task_posture.py             |  12 +-
 .../sot/core/meta_task_visual_point.py        |  52 ++--
 src/dynamic_graph/sot/core/meta_tasks.py      |  24 +-
 src/dynamic_graph/sot/core/meta_tasks_kine.py |  11 +-
 .../sot/core/meta_tasks_kine_relative.py      |  65 +++--
 src/dynamic_graph/sot/core/utils/attime.py    |  27 +-
 src/dynamic_graph/sot/core/utils/history.py   |  63 +++--
 .../core/utils/thread_interruptible_loop.py   |   5 +-
 .../sot/core/utils/viewer_helper.py           |  40 +--
 .../sot/core/utils/viewer_loger.py            |  24 +-
 src/exception/exception-abstract.cpp          |  11 +-
 src/exception/exception-dynamic.cpp           |   3 +-
 src/exception/exception-factory.cpp           |   3 +-
 src/exception/exception-feature.cpp           |   3 +-
 src/exception/exception-signal.cpp            |   3 +-
 src/exception/exception-task.cpp              |   3 +-
 src/exception/exception-tools.cpp             |   3 +-
 src/factory/additional-functions.cpp          |   1 +
 src/factory/pool.cpp                          |   9 +-
 src/feature/feature-1d.cpp                    |   3 +-
 src/feature/feature-abstract.cpp              |  31 +--
 src/feature/feature-generic.cpp               |  18 +-
 src/feature/feature-joint-limits-command.h    |  16 +-
 src/feature/feature-joint-limits.cpp          |  14 +-
 src/feature/feature-line-distance.cpp         |   7 +-
 src/feature/feature-point6d-relative.cpp      |  21 +-
 src/feature/feature-point6d.cpp               | 138 +++++-----
 src/feature/feature-pose.cpp                  |  16 +-
 src/feature/feature-posture.cpp               |  50 ++--
 src/feature/feature-task.cpp                  |   4 +-
 src/feature/feature-vector3.cpp               |  15 +-
 src/feature/feature-visual-point.cpp          |  19 +-
 src/feature/visual-point-projecter.cpp        |  14 +-
 src/filters/causal-filter.cpp                 |  16 +-
 src/filters/filter-differentiator.cpp         |  40 ++-
 src/filters/madgwickahrs.cpp                  |  28 +-
 src/math/op-point-modifier.cpp                |  27 +-
 src/math/vector-quaternion.cpp                |   4 +-
 src/matrix/derivator.cpp                      |  44 ++--
 src/matrix/double-constant.cpp                |  21 +-
 src/matrix/fir-filter.cpp                     |  16 +-
 .../integrator-euler-python-module-py.cc      |  41 +--
 src/matrix/integrator-euler.cpp               |   5 +-
 src/matrix/integrator-euler.t.cpp             |   8 +-
 src/matrix/matrix-constant-command.h          |  18 +-
 src/matrix/matrix-constant.cpp                |  30 ++-
 src/matrix/matrix-svd.cpp                     |   2 +-
 src/matrix/operator-python-module-py.cc       |  19 +-
 src/matrix/operator.cpp                       |  40 +--
 src/matrix/operator.hh                        | 247 +++++++++---------
 src/matrix/vector-constant-command.h          |  14 +-
 src/matrix/vector-constant.cpp                |  27 +-
 src/matrix/vector-to-rotation.cpp             |  55 ++--
 src/python-module.cc                          |  39 +--
 src/signal/signal-cast.cpp                    |  13 +-
 src/sot/flags.cpp                             |  65 +++--
 src/sot/memory-task-sot.cpp                   |   5 +-
 src/sot/sot-command.h                         |  38 +--
 src/sot/sot.cpp                               | 213 +++++++--------
 src/task/gain-adaptive.cpp                    |  50 ++--
 src/task/multi-bound.cpp                      | 131 +++++-----
 src/task/task-abstract.cpp                    |   3 +-
 src/task/task-command.h                       |  14 +-
 src/task/task-conti.cpp                       |  22 +-
 src/task/task-pd.cpp                          |   5 +-
 src/task/task-unilateral.cpp                  |  11 +-
 src/task/task.cpp                             |  47 ++--
 src/tools/binary-int-to-uint.cpp              |   8 +-
 src/tools/clamp-workspace.cpp                 |  46 ++--
 src/tools/com-freezer.cpp                     |  10 +-
 src/tools/device.cpp                          | 202 +++++++-------
 src/tools/event.cpp                           |  12 +-
 src/tools/exp-moving-avg.cpp                  |  13 +-
 src/tools/gradient-ascent.cpp                 |   3 +-
 src/tools/gripper-control.cpp                 |  61 +++--
 src/tools/joint-limitator.cpp                 |   3 +-
 src/tools/joint-trajectory-command.hh         |  14 +-
 src/tools/joint-trajectory-entity.cpp         |  52 ++--
 src/tools/kalman.cpp                          |  33 +--
 src/tools/latch.cpp                           |   4 +-
 src/tools/mailbox-vector.cpp                  |   1 +
 src/tools/motion-period.cpp                   |  63 ++---
 src/tools/neck-limitation.cpp                 |  20 +-
 src/tools/parameter-server.cpp                |  49 ++--
 src/tools/periodic-call-entity.cpp            |   5 +-
 src/tools/periodic-call.cpp                   |   3 +-
 src/tools/robot-simu.cpp                      |  27 +-
 src/tools/robot-utils-py.cpp                  |   1 -
 src/tools/robot-utils.cpp                     |  45 ++--
 src/tools/sequencer.cpp                       |  38 ++-
 src/tools/smooth-reach.cpp                    |  36 +--
 src/tools/sot-loader.cpp                      |  19 +-
 src/tools/switch-python-module-py.cc          |   6 +-
 src/tools/switch.cpp                          |  14 +-
 src/tools/time-stamp.cpp                      |   8 +-
 src/tools/timer.cpp                           |  10 +-
 src/tools/trajectory.cpp                      |  53 ++--
 src/tools/type-name-helper.hh                 |  10 +-
 src/tools/utils-windows.cpp                   |   3 +-
 src/traces/reader.cpp                         |  32 +--
 src/utils/stop-watch.cpp                      |  52 ++--
 tests/CMakeLists.txt                          |   2 +-
 tests/control/test_control_admittance.cpp     |   1 +
 tests/control/test_control_pd.cpp             |   1 +
 tests/factory/test_factory.cpp                |  12 +-
 tests/features/test_feature_generic.cpp       | 141 +++++-----
 tests/features/test_feature_point6d.cpp       |  19 +-
 tests/filters/test_filter_differentiator.cpp  |  37 +--
 tests/filters/test_madgwick_ahrs.cpp          |  10 +-
 tests/filters/test_madgwick_arhs.cpp          |  34 +--
 tests/math/matrix-homogeneous.cpp             |  52 ++--
 tests/math/matrix-twist.cpp                   |  22 +-
 tests/matrix/test_operator.cpp                |  61 +++--
 tests/python/parameter_server_conf.py         |  14 +-
 tests/python/test-imports.py                  |   2 +-
 tests/python/test-initialize-euler.py         |   6 +-
 tests/python/test-matrix-util.py              |  20 +-
 tests/python/test-op-point-modifier.py        | 144 +++++++---
 tests/python/test-parameter-server.py         |   8 +-
 tests/python/test-smooth-reach.py             |   2 +-
 tests/signal/test_dep.cpp                     |  15 +-
 tests/signal/test_depend.cpp                  |  17 +-
 tests/signal/test_ptr.cpp                     |  18 +-
 tests/signal/test_ptrcast.cpp                 |   1 +
 tests/signal/test_signal.cpp                  |   4 +-
 tests/sot/test_solverSoth.cpp                 |  44 ++--
 tests/sot/tsot.cpp                            |   4 +-
 tests/task/test_flags.cpp                     |   3 +-
 tests/task/test_gain.cpp                      |   3 +-
 tests/task/test_task.cpp                      |   7 +-
 tests/tools/dummy-sot-external-interface.cc   |   6 +-
 tests/tools/dummy-sot-external-interface.hh   |   4 +-
 tests/tools/plugin.cc                         |   8 +-
 tests/tools/plugin.hh                         |   2 +-
 tests/tools/test_abstract_interface.cpp       |   8 +-
 tests/tools/test_boost.cpp                    |  45 ++--
 tests/tools/test_control_pd.cpp               |   1 +
 tests/tools/test_device.cpp                   |  16 +-
 tests/tools/test_mailbox.cpp                  |   4 +-
 tests/tools/test_matrix.cpp                   |  18 +-
 tests/tools/test_robot_utils.cpp              |   1 +
 tests/tools/test_sot_loader.cpp               |  31 +--
 tests/traces/files.cpp                        |   6 +-
 tests/traces/test_traces.cpp                  |   4 +-
 257 files changed, 3385 insertions(+), 3023 deletions(-)

diff --git a/.gitignore b/.gitignore
index 264c367f..b8952e2c 100644
--- a/.gitignore
+++ b/.gitignore
@@ -4,4 +4,4 @@ include/sot-core/import-default-paths.h
 unitTesting/test-paths.h
 *~
 _build*
-*__pycache__*
\ No newline at end of file
+*__pycache__*
diff --git a/INSTALL b/INSTALL
index 22534b78..2e93a0ec 100644
--- a/INSTALL
+++ b/INSTALL
@@ -9,7 +9,7 @@ It is recommended to create a specific directory to install this package.
 mkdir build
 cd build
 cmake [Options] ..
-make 
+make
 make install
 
 Options:
diff --git a/NEWS b/NEWS
index b079810e..5e381c14 100644
--- a/NEWS
+++ b/NEWS
@@ -163,4 +163,3 @@ New in version 1.1 - 2010/09/30
       Packages libraries in Debian package.
       Extend description of Debian package.
       Add missing build dependencies.
-
diff --git a/doc/pictures/feature.fig b/doc/pictures/feature.fig
index 30af0c3a..ec1fdde1 100644
--- a/doc/pictures/feature.fig
+++ b/doc/pictures/feature.fig
@@ -2,7 +2,7 @@
 Landscape
 Center
 Metric
-A4      
+A4
 100.00
 Single
 -2
diff --git a/doc/pictures/task.fig b/doc/pictures/task.fig
index 6a68b026..352e6923 100644
--- a/doc/pictures/task.fig
+++ b/doc/pictures/task.fig
@@ -2,7 +2,7 @@
 Landscape
 Center
 Metric
-A4      
+A4
 100.00
 Single
 -2
diff --git a/include/sot/core/abstract-sot-external-interface.hh b/include/sot/core/abstract-sot-external-interface.hh
index 484ea3d3..9a139725 100644
--- a/include/sot/core/abstract-sot-external-interface.hh
+++ b/include/sot/core/abstract-sot-external-interface.hh
@@ -18,12 +18,11 @@ namespace dynamicgraph {
 namespace sot {
 
 class SOT_CORE_EXPORT NamedVector {
-
-private:
+ private:
   std::string name_;
   std::vector<double> values_;
 
-public:
+ public:
   NamedVector() {}
   ~NamedVector() {}
 
@@ -39,30 +38,30 @@ typedef NamedVector SensorValues;
 typedef NamedVector ControlValues;
 
 class SOT_CORE_EXPORT AbstractSotExternalInterface {
-public:
+ public:
   AbstractSotExternalInterface() {}
 
   virtual ~AbstractSotExternalInterface() {}
 
-  virtual void
-  setupSetSensors(std::map<std::string, SensorValues> &sensorsIn) = 0;
+  virtual void setupSetSensors(
+      std::map<std::string, SensorValues> &sensorsIn) = 0;
 
-  virtual void
-  nominalSetSensors(std::map<std::string, SensorValues> &sensorsIn) = 0;
+  virtual void nominalSetSensors(
+      std::map<std::string, SensorValues> &sensorsIn) = 0;
 
-  virtual void
-  cleanupSetSensors(std::map<std::string, SensorValues> &sensorsIn) = 0;
+  virtual void cleanupSetSensors(
+      std::map<std::string, SensorValues> &sensorsIn) = 0;
 
   virtual void getControl(std::map<std::string, ControlValues> &) = 0;
   virtual void setSecondOrderIntegration(void) = 0;
   virtual void setNoIntegration(void) = 0;
 };
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 typedef dynamicgraph::sot::AbstractSotExternalInterface *
 createSotExternalInterface_t();
 typedef void destroySotExternalInterface_t(
     dynamicgraph::sot::AbstractSotExternalInterface *);
 
-#endif // ABSTRACT_SOT_EXTERNAL_INTERFACE_HH
+#endif  // ABSTRACT_SOT_EXTERNAL_INTERFACE_HH
diff --git a/include/sot/core/additional-functions.hh b/include/sot/core/additional-functions.hh
index c4f82e00..80bba781 100644
--- a/include/sot/core/additional-functions.hh
+++ b/include/sot/core/additional-functions.hh
@@ -8,12 +8,14 @@
  */
 
 /* SOT */
-#include "sot/core/api.hh"
 #include <dynamic-graph/pool.h>
 #include <dynamic-graph/signal-base.h>
+
 #include <sot/core/exception-factory.hh>
 #include <sot/core/pool.hh>
 
+#include "sot/core/api.hh"
+
 /* --- STD --- */
 #include <map>
 #include <sstream>
@@ -31,7 +33,7 @@ namespace sot {
   to allow creation of tasks and features as well as entities.
  */
 class AdditionalFunctions {
-public:
+ public:
   AdditionalFunctions();
   ~AdditionalFunctions();
   static void cmdFlagSet(const std::string &cmd, std::istringstream &args,
diff --git a/include/sot/core/admittance-control-op-point.hh b/include/sot/core/admittance-control-op-point.hh
index c703ecd3..79264703 100644
--- a/include/sot/core/admittance-control-op-point.hh
+++ b/include/sot/core/admittance-control-op-point.hh
@@ -31,12 +31,12 @@
 
 #include <dynamic-graph/signal-helper.h>
 
+#include <sot/core/matrix-geometry.hh>
+
 #include "pinocchio/spatial/force.hpp"
 #include "pinocchio/spatial/motion.hpp"
 #include "pinocchio/spatial/se3.hpp"
 
-#include <sot/core/matrix-geometry.hh>
-
 namespace dynamicgraph {
 namespace sot {
 namespace core {
@@ -60,7 +60,7 @@ class ADMITTANCECONTROLOPPOINT_EXPORT AdmittanceControlOpPoint
     : public ::dynamicgraph::Entity {
   DYNAMIC_GRAPH_ENTITY_DECL();
 
-public:
+ public:
   EIGEN_MAKE_ALIGNED_OPERATOR_NEW
 
   /* --- CONSTRUCTOR ---- */
@@ -106,7 +106,7 @@ public:
   /* --- ENTITY INHERITANCE --- */
   virtual void display(std::ostream &os) const;
 
-protected:
+ protected:
   /// Dimension of the force signals and of the output
   int m_n;
   /// True if the entity has been successfully initialized
@@ -118,10 +118,10 @@ protected:
   // Weight of the end-effector
   double m_mass;
 
-}; // class AdmittanceControlOpPoint
+};  // class AdmittanceControlOpPoint
 
-} // namespace core
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace core
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // #ifndef __sot_core_admittance_control_op_point_H__
+#endif  // #ifndef __sot_core_admittance_control_op_point_H__
diff --git a/include/sot/core/binary-int-to-uint.hh b/include/sot/core/binary-int-to-uint.hh
index a073117f..cdf83032 100644
--- a/include/sot/core/binary-int-to-uint.hh
+++ b/include/sot/core/binary-int-to-uint.hh
@@ -17,6 +17,7 @@
 /* SOT */
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/exception-task.hh>
 
 /* --------------------------------------------------------------------- */
@@ -37,16 +38,16 @@ namespace dynamicgraph {
 namespace sot {
 
 class SOTBINARYINTTOUINT_EXPORT BinaryIntToUint : public dynamicgraph::Entity {
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
   /* --- SIGNALS ------------------------------------------------------------ */
-public:
+ public:
   dynamicgraph::SignalPtr<int, int> binaryIntSIN;
   dynamicgraph::SignalTimeDependent<unsigned, int> binaryUintSOUT;
 
-public:
+ public:
   BinaryIntToUint(const std::string &name);
   virtual ~BinaryIntToUint() {}
 
diff --git a/include/sot/core/binary-op.hh b/include/sot/core/binary-op.hh
index 43d0277a..3f74a887 100644
--- a/include/sot/core/binary-op.hh
+++ b/include/sot/core/binary-op.hh
@@ -20,14 +20,14 @@
 /* SOT */
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/flags.hh>
 #include <sot/core/matrix-geometry.hh>
 #include <sot/core/pool.hh>
 
 /* STD */
-#include <string>
-
 #include <boost/function.hpp>
+#include <string>
 
 namespace dynamicgraph {
 namespace sot {
@@ -36,14 +36,15 @@ namespace sot {
 /* --- CLASS ----------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 
-template <typename Operator> class BinaryOp : public Entity {
+template <typename Operator>
+class BinaryOp : public Entity {
   Operator op;
   typedef typename Operator::Tin1 Tin1;
   typedef typename Operator::Tin2 Tin2;
   typedef typename Operator::Tout Tout;
   typedef BinaryOp<Operator> Self;
 
-public: /* --- CONSTRUCTION --- */
+ public: /* --- CONSTRUCTION --- */
   static std::string getTypeIn1Name(void) { return Operator::nameTypeIn1(); }
   static std::string getTypeIn2Name(void) { return Operator::nameTypeIn2(); }
   static std::string getTypeOutName(void) { return Operator::nameTypeOut(); }
@@ -66,12 +67,12 @@ public: /* --- CONSTRUCTION --- */
 
   virtual ~BinaryOp(void){};
 
-public: /* --- SIGNAL --- */
+ public: /* --- SIGNAL --- */
   SignalPtr<Tin1, int> SIN1;
   SignalPtr<Tin2, int> SIN2;
   SignalTimeDependent<Tout, int> SOUT;
 
-protected:
+ protected:
   Tout &computeOperation(Tout &res, int time) {
     const Tin1 &x1 = SIN1(time);
     const Tin2 &x2 = SIN2(time);
@@ -79,7 +80,7 @@ protected:
     return res;
   }
 };
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // #ifndef SOT_CORE_BINARYOP_HH
+#endif  // #ifndef SOT_CORE_BINARYOP_HH
diff --git a/include/sot/core/causal-filter.hh b/include/sot/core/causal-filter.hh
index 8f3110d5..b372d9f8 100644
--- a/include/sot/core/causal-filter.hh
+++ b/include/sot/core/causal-filter.hh
@@ -43,7 +43,7 @@ namespace dynamicgraph {
 namespace sot {
 
 class CausalFilter {
-public:
+ public:
   EIGEN_MAKE_ALIGNED_OPERATOR_NEW
 
   /** --- CONSTRUCTOR ----
@@ -64,7 +64,7 @@ public:
   void switch_filter(const Eigen::VectorXd &filter_numerator,
                      const Eigen::VectorXd &filter_denominator);
 
-private:
+ private:
   /// sampling timestep of the input signal
   double m_dt;
   /// Size
@@ -84,7 +84,7 @@ private:
   int m_pt_denominator;
   Eigen::MatrixXd m_input_buffer;
   Eigen::MatrixXd m_output_buffer;
-}; // class CausalFilter
-} // namespace sot
-} // namespace dynamicgraph
+};  // class CausalFilter
+}  // namespace sot
+}  // namespace dynamicgraph
 #endif /* _SOT_CORE_CAUSAL_FILTER_H_ */
diff --git a/include/sot/core/clamp-workspace.hh b/include/sot/core/clamp-workspace.hh
index d1c2544c..1970068c 100644
--- a/include/sot/core/clamp-workspace.hh
+++ b/include/sot/core/clamp-workspace.hh
@@ -19,6 +19,7 @@
 /* SOT */
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/exception-task.hh>
 #include <sot/core/matrix-geometry.hh>
 
@@ -44,19 +45,19 @@ namespace sot {
 /* --------------------------------------------------------------------- */
 
 class SOTCLAMPWORKSPACE_EXPORT ClampWorkspace : public dynamicgraph::Entity {
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
   /* --- SIGNALS ------------------------------------------------------------ */
-public:
+ public:
   dynamicgraph::SignalPtr<MatrixHomogeneous, int> positionrefSIN;
   dynamicgraph::SignalPtr<MatrixHomogeneous, int> positionSIN;
   dynamicgraph::SignalTimeDependent<dynamicgraph::Matrix, int> alphaSOUT;
   dynamicgraph::SignalTimeDependent<dynamicgraph::Matrix, int> alphabarSOUT;
   dynamicgraph::SignalTimeDependent<MatrixHomogeneous, int> handrefSOUT;
 
-public:
+ public:
   ClampWorkspace(const std::string &name);
   virtual ~ClampWorkspace(void) {}
 
@@ -70,7 +71,7 @@ public:
 
   virtual void display(std::ostream &) const;
 
-private:
+ private:
   int timeUpdate;
 
   dynamicgraph::Matrix alpha;
diff --git a/include/sot/core/com-freezer.hh b/include/sot/core/com-freezer.hh
index ab58d8dd..0beea541 100644
--- a/include/sot/core/com-freezer.hh
+++ b/include/sot/core/com-freezer.hh
@@ -43,29 +43,29 @@ namespace sot {
 /* --------------------------------------------------------------------- */
 
 class SOTCOMFREEZER_EXPORT CoMFreezer : public dynamicgraph::Entity {
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName() const { return CLASS_NAME; }
 
-private:
+ private:
   dynamicgraph::Vector m_lastCoM;
   bool m_previousPGInProcess;
   int m_lastStopTime;
 
-public: /* --- CONSTRUCTION --- */
+ public: /* --- CONSTRUCTION --- */
   CoMFreezer(const std::string &name);
   virtual ~CoMFreezer(void);
 
-public: /* --- SIGNAL --- */
+ public: /* --- SIGNAL --- */
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> CoMRefSIN;
   dynamicgraph::SignalPtr<unsigned, int> PGInProcessSIN;
   dynamicgraph::SignalTimeDependent<dynamicgraph::Vector, int> freezedCoMSOUT;
 
-public: /* --- FUNCTION --- */
+ public: /* --- FUNCTION --- */
   dynamicgraph::Vector &computeFreezedCoM(dynamicgraph::Vector &freezedCoM,
                                           const int &time);
 
-public: /* --- PARAMS --- */
+ public: /* --- PARAMS --- */
   virtual void display(std::ostream &os) const;
 };
 
diff --git a/include/sot/core/contiifstream.hh b/include/sot/core/contiifstream.hh
index 3a3ebe82..8c239eec 100644
--- a/include/sot/core/contiifstream.hh
+++ b/include/sot/core/contiifstream.hh
@@ -33,7 +33,7 @@ namespace sot {
 /* --- CLASS ----------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 class SOT_CORE_EXPORT Contiifstream {
-protected:
+ protected:
   std::string filename;
   std::streamoff cursor;
   static const unsigned int BUFFER_SIZE = 256;
@@ -41,7 +41,7 @@ protected:
   std::list<std::string> reader;
   bool first;
 
-public: /* --- Constructor --- */
+ public: /* --- Constructor --- */
   Contiifstream(const std::string &n = "");
   ~Contiifstream(void);
   void open(const std::string &n) {
@@ -49,10 +49,10 @@ public: /* --- Constructor --- */
     cursor = 0;
   }
 
-public: /* --- READ FILE --- */
+ public: /* --- READ FILE --- */
   bool loop(void);
 
-public: /* --- READ LIST --- */
+ public: /* --- READ LIST --- */
   inline bool ready(void) { return 0 < reader.size(); }
   std::string next(void);
 };
diff --git a/include/sot/core/control-gr.hh b/include/sot/core/control-gr.hh
index 9a8f1409..4c72f405 100644
--- a/include/sot/core/control-gr.hh
+++ b/include/sot/core/control-gr.hh
@@ -44,40 +44,39 @@ namespace sot {
 /* --------------------------------------------------------------------- */
 
 class ControlGR_EXPORT ControlGR : public Entity {
-
-public: /* --- CONSTRUCTOR ---- */
+ public: /* --- CONSTRUCTOR ---- */
   ControlGR(const std::string &name);
 
-public: /* --- INIT --- */
+ public: /* --- INIT --- */
   void init(const double &step);
 
-public: /* --- CONSTANTS --- */
+ public: /* --- CONSTANTS --- */
   /* Default values. */
-  static const double TIME_STEP_DEFAULT; // = 0.001
+  static const double TIME_STEP_DEFAULT;  // = 0.001
 
-public: /* --- ENTITY INHERITANCE --- */
+ public: /* --- ENTITY INHERITANCE --- */
   static const std::string CLASS_NAME;
   virtual void display(std::ostream &os) const;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-protected:
+ protected:
   /* Parameters of the torque-control function:
    * tau = - A*qddot = g */
   double TimeStep;
   double _dimension;
 
-public: /* --- SIGNALS --- */
+ public: /* --- SIGNALS --- */
   SignalPtr<dynamicgraph::Matrix, int> matrixASIN;
   SignalPtr<dynamicgraph::Vector, int> accelerationSIN;
   SignalPtr<dynamicgraph::Vector, int> gravitySIN;
   SignalTimeDependent<dynamicgraph::Vector, int> controlSOUT;
 
-protected:
+ protected:
   double &setsize(int dimension);
   dynamicgraph::Vector &computeControl(dynamicgraph::Vector &tau, int t);
 };
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // #ifndef __SOT_Control_GR_HH__
+#endif  // #ifndef __SOT_Control_GR_HH__
diff --git a/include/sot/core/control-pd.hh b/include/sot/core/control-pd.hh
index 31ad8056..a124ca12 100644
--- a/include/sot/core/control-pd.hh
+++ b/include/sot/core/control-pd.hh
@@ -44,28 +44,27 @@ namespace sot {
 /* --------------------------------------------------------------------- */
 
 class ControlPD_EXPORT ControlPD : public Entity {
-
-public: /* --- CONSTRUCTOR ---- */
+ public: /* --- CONSTRUCTOR ---- */
   ControlPD(const std::string &name);
 
-public: /* --- INIT --- */
+ public: /* --- INIT --- */
   void init(const double &step);
 
-public: /* --- CONSTANTS --- */
+ public: /* --- CONSTANTS --- */
   /* Default values. */
-  static const double TIME_STEP_DEFAULT; // = 0.001
+  static const double TIME_STEP_DEFAULT;  // = 0.001
 
-public: /* --- ENTITY INHERITANCE --- */
+ public: /* --- ENTITY INHERITANCE --- */
   static const std::string CLASS_NAME;
   virtual void display(std::ostream &os) const;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-protected:
+ protected:
   /* Parameters of the torque-control function:
    * tau = kp * (qd-q) + kd* (dqd-dq) */
   double TimeStep;
 
-public: /* --- SIGNALS --- */
+ public: /* --- SIGNALS --- */
   SignalPtr<dynamicgraph::Vector, int> KpSIN;
   SignalPtr<dynamicgraph::Vector, int> KdSIN;
   SignalPtr<dynamicgraph::Vector, int> positionSIN;
@@ -76,7 +75,7 @@ public: /* --- SIGNALS --- */
   SignalTimeDependent<dynamicgraph::Vector, int> positionErrorSOUT;
   SignalTimeDependent<dynamicgraph::Vector, int> velocityErrorSOUT;
 
-protected:
+ protected:
   dynamicgraph::Vector &computeControl(dynamicgraph::Vector &tau, int t);
   dynamicgraph::Vector position_error_;
   dynamicgraph::Vector velocity_error_;
@@ -86,7 +85,7 @@ protected:
                                          int t);
 };
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // #ifndef __SOT_Control_PD_HH__
+#endif  // #ifndef __SOT_Control_PD_HH__
diff --git a/include/sot/core/debug.hh b/include/sot/core/debug.hh
index dee51e55..33bb0e17 100644
--- a/include/sot/core/debug.hh
+++ b/include/sot/core/debug.hh
@@ -9,33 +9,34 @@
 
 #ifndef SOT_CORE_DEBUG_HH
 #define SOT_CORE_DEBUG_HH
-#include "sot/core/api.hh"
 #include <cstdarg>
 #include <cstdio>
 #include <fstream>
 #include <sstream>
 
+#include "sot/core/api.hh"
+
 #ifndef VP_DEBUG_MODE
 #define VP_DEBUG_MODE 0
-#endif //! VP_DEBUG_MODE
+#endif  //! VP_DEBUG_MODE
 
 #ifndef VP_TEMPLATE_DEBUG_MODE
 #define VP_TEMPLATE_DEBUG_MODE 0
-#endif //! VP_TEMPLATE_DEBUG_MODE
-
-#define SOT_COMMON_TRACES                                                      \
-  do {                                                                         \
-    va_list arg;                                                               \
-    va_start(arg, format);                                                     \
-    vsnprintf(charbuffer, SIZE, format, arg);                                  \
-    va_end(arg);                                                               \
-    outputbuffer << tmpbuffer.str() << charbuffer << std::endl;                \
+#endif  //! VP_TEMPLATE_DEBUG_MODE
+
+#define SOT_COMMON_TRACES                                       \
+  do {                                                          \
+    va_list arg;                                                \
+    va_start(arg, format);                                      \
+    vsnprintf(charbuffer, SIZE, format, arg);                   \
+    va_end(arg);                                                \
+    outputbuffer << tmpbuffer.str() << charbuffer << std::endl; \
   } while (0)
 
 namespace dynamicgraph {
 namespace sot {
 class SOT_CORE_EXPORT DebugTrace {
-public:
+ public:
   static const int SIZE = 512;
 
   std::stringstream tmpbuffer;
@@ -47,8 +48,7 @@ public:
   DebugTrace(std::ostream &os) : outputbuffer(os) {}
 
   inline void trace(const int level, const char *format, ...) {
-    if (level <= traceLevel)
-      SOT_COMMON_TRACES;
+    if (level <= traceLevel) SOT_COMMON_TRACES;
     tmpbuffer.str("");
   }
 
@@ -58,14 +58,12 @@ public:
   }
 
   inline void trace(const int level = -1) {
-    if (level <= traceLevel)
-      outputbuffer << tmpbuffer.str();
+    if (level <= traceLevel) outputbuffer << tmpbuffer.str();
     tmpbuffer.str("");
   }
 
   inline void traceTemplate(const int level, const char *format, ...) {
-    if (level <= traceLevelTemplate)
-      SOT_COMMON_TRACES;
+    if (level <= traceLevelTemplate) SOT_COMMON_TRACES;
     tmpbuffer.str("");
   }
 
@@ -88,66 +86,66 @@ public:
 
 SOT_CORE_EXPORT extern DebugTrace sotDEBUGFLOW;
 SOT_CORE_EXPORT extern DebugTrace sotERRORFLOW;
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 #ifdef VP_DEBUG
-#define sotPREDEBUG                                                            \
+#define sotPREDEBUG \
   __FILE__ << ": " << __FUNCTION__ << "(#" << __LINE__ << ") :"
 
-#define sotPREERROR                                                            \
+#define sotPREERROR \
   "\t!! " << __FILE__ << ": " << __FUNCTION__ << "(#" << __LINE__ << ") :"
 
-#define sotDEBUG(level)                                                        \
-  if ((level > VP_DEBUG_MODE) ||                                               \
-      (!dynamicgraph::sot::sotDEBUGFLOW.outputbuffer.good()))                  \
-    ;                                                                          \
-  else                                                                         \
+#define sotDEBUG(level)                                       \
+  if ((level > VP_DEBUG_MODE) ||                              \
+      (!dynamicgraph::sot::sotDEBUGFLOW.outputbuffer.good())) \
+    ;                                                         \
+  else                                                        \
     dynamicgraph::sot::sotDEBUGFLOW.outputbuffer << sotPREDEBUG
 
-#define sotDEBUGMUTE(level)                                                    \
-  if ((level > VP_DEBUG_MODE) ||                                               \
-      (!dynamicgraph::sot::sotDEBUGFLOW.outputbuffer.good()))                  \
-    ;                                                                          \
-  else                                                                         \
+#define sotDEBUGMUTE(level)                                   \
+  if ((level > VP_DEBUG_MODE) ||                              \
+      (!dynamicgraph::sot::sotDEBUGFLOW.outputbuffer.good())) \
+    ;                                                         \
+  else                                                        \
     dynamicgraph::sot::sotDEBUGFLOW.outputbuffer
 
-#define sotERROR                                                               \
-  if (!dynamicgraph::sot::sotDEBUGFLOW.outputbuffer.good())                    \
-    ;                                                                          \
-  else                                                                         \
+#define sotERROR                                            \
+  if (!dynamicgraph::sot::sotDEBUGFLOW.outputbuffer.good()) \
+    ;                                                       \
+  else                                                      \
     dynamicgraph::sot::sotERRORFLOW.outputbuffer << sotPREERROR
 
-#define sotDEBUGF                                                              \
-  if (!dynamicgraph::sot::sotDEBUGFLOW.outputbuffer.good())                    \
-    ;                                                                          \
-  else                                                                         \
-    dynamicgraph::sot::sotDEBUGFLOW                                            \
-        .pre(dynamicgraph::sot::sotDEBUGFLOW.tmpbuffer << sotPREDEBUG,         \
-             VP_DEBUG_MODE)                                                    \
+#define sotDEBUGF                                                      \
+  if (!dynamicgraph::sot::sotDEBUGFLOW.outputbuffer.good())            \
+    ;                                                                  \
+  else                                                                 \
+    dynamicgraph::sot::sotDEBUGFLOW                                    \
+        .pre(dynamicgraph::sot::sotDEBUGFLOW.tmpbuffer << sotPREDEBUG, \
+             VP_DEBUG_MODE)                                            \
         .trace
 
-#define sotERRORF                                                              \
-  if (!dynamicgraph::sot::sotDEBUGFLOW.outputbuffer.good())                    \
-    ;                                                                          \
-  else                                                                         \
+#define sotERRORF                                           \
+  if (!dynamicgraph::sot::sotDEBUGFLOW.outputbuffer.good()) \
+    ;                                                       \
+  else                                                      \
     sot::sotERRORFLOW.pre(sot::sotERRORFLOW.tmpbuffer << sotPREERROR).trace
 
 // TEMPLATE
-#define sotTDEBUG(level)                                                       \
-  if ((level > VP_TEMPLATE_DEBUG_MODE) ||                                      \
-      (!dynamicgraph::sot::sotDEBUGFLOW.outputbuffer.good()))                  \
-    ;                                                                          \
-  else                                                                         \
+#define sotTDEBUG(level)                                      \
+  if ((level > VP_TEMPLATE_DEBUG_MODE) ||                     \
+      (!dynamicgraph::sot::sotDEBUGFLOW.outputbuffer.good())) \
+    ;                                                         \
+  else                                                        \
     dynamicgraph::sot::sotDEBUGFLOW.outputbuffer << sotPREDEBUG
 
-#define sotTDEBUGF                                                             \
-  if (!dynamicgraph::sot::sotDEBUGFLOW.outputbuffer.good())                    \
-    ;                                                                          \
-  else                                                                         \
-    dynamicgraph::sot::sotDEBUGFLOW                                            \
-        .pre(dynamicgraph::sot::sotDEBUGFLOW.tmpbuffer << sotPREDEBUG,         \
-             VP_TEMPLATE_DEBUG_MODE)                                           \
+#define sotTDEBUGF                                                     \
+  if (!dynamicgraph::sot::sotDEBUGFLOW.outputbuffer.good())            \
+    ;                                                                  \
+  else                                                                 \
+    dynamicgraph::sot::sotDEBUGFLOW                                    \
+        .pre(dynamicgraph::sot::sotDEBUGFLOW.tmpbuffer << sotPREDEBUG, \
+             VP_TEMPLATE_DEBUG_MODE)                                   \
         .trace
 
 namespace dynamicgraph {
@@ -157,22 +155,22 @@ inline bool sotDEBUG_ENABLE(const int &level) { return level <= VP_DEBUG_MODE; }
 inline bool sotTDEBUG_ENABLE(const int &level) {
   return level <= VP_TEMPLATE_DEBUG_MODE;
 }
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 /* -------------------------------------------------------------------------- */
-#else // VP_DEBUG
-#define sotPREERROR                                                            \
+#else  // VP_DEBUG
+#define sotPREERROR \
   "\t!! " << __FILE__ << ": " << __FUNCTION__ << "(#" << __LINE__ << ") :"
-#define sotDEBUG(level)                                                        \
-  if (1)                                                                       \
-    ;                                                                          \
-  else                                                                         \
+#define sotDEBUG(level) \
+  if (1)                \
+    ;                   \
+  else                  \
     ::dynamicgraph::sot::__null_stream()
-#define sotDEBUGMUTE(level)                                                    \
-  if (1)                                                                       \
-    ;                                                                          \
-  else                                                                         \
+#define sotDEBUGMUTE(level) \
+  if (1)                    \
+    ;                       \
+  else                      \
     ::dynamicgraph::sot::__null_stream()
 #define sotERROR sotERRORFLOW.outputbuffer << sotPREERROR
 
@@ -188,27 +186,27 @@ inline std::ostream &__null_stream() {
   static std::ostream os(NULL);
   return os;
 }
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 // TEMPLATE
-#define sotTDEBUG(level)                                                       \
-  if (1)                                                                       \
-    ;                                                                          \
-  else                                                                         \
+#define sotTDEBUG(level) \
+  if (1)                 \
+    ;                    \
+  else                   \
     ::dynamicgraph::sot::__null_stream()
 
 namespace dynamicgraph {
 namespace sot {
 inline void sotTDEBUGF(const int, const char *, ...) {}
 inline void sotTDEBUGF(const char *, ...) {}
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 #define sotDEBUG_ENABLE(level) false
 #define sotTDEBUG_ENABLE(level) false
 
-#endif // VP_DEBUG
+#endif  // VP_DEBUG
 
 #define sotDEBUGIN(level) sotDEBUG(level) << "# In {" << std::endl
 #define sotDEBUGOUT(level) sotDEBUG(level) << "# Out }" << std::endl
@@ -218,7 +216,7 @@ inline void sotTDEBUGF(const char *, ...) {}
 #define sotTDEBUGOUT(level) sotTDEBUG(level) << "# Out }" << std::endl
 #define sotTDEBUGINOUT(level) sotTDEBUG(level) << "# In/Out { }" << std::endl
 
-#endif //! #ifdef SOT_CORE_DEBUG_HH
+#endif  //! #ifdef SOT_CORE_DEBUG_HH
 
 // Local variables:
 // c-basic-offset: 2
diff --git a/include/sot/core/derivator-impl.hh b/include/sot/core/derivator-impl.hh
index ba354eef..c5dc09c2 100644
--- a/include/sot/core/derivator-impl.hh
+++ b/include/sot/core/derivator-impl.hh
@@ -35,13 +35,13 @@ namespace dynamicgraph {
 namespace sot {
 
 #ifdef WIN32
-#define DECLARE_SPECIFICATION(className, sotSigType)                           \
-  class DERIVATOR_EXPORT className : public Derivator<sotSigType> {            \
-  public:                                                                      \
-    className(const std::string &name);                                        \
+#define DECLARE_SPECIFICATION(className, sotSigType)                \
+  class DERIVATOR_EXPORT className : public Derivator<sotSigType> { \
+   public:                                                          \
+    className(const std::string &name);                             \
   };
 #else
-#define DECLARE_SPECIFICATION(className, sotSigType)                           \
+#define DECLARE_SPECIFICATION(className, sotSigType) \
   typedef Derivator<sotSigType> className;
 #endif
 
@@ -52,4 +52,4 @@ DECLARE_SPECIFICATION(DerivatorVectorQuaternion, VectorQuaternion)
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOT_DERIVATOR_H__
+#endif  // #ifndef __SOT_DERIVATOR_H__
diff --git a/include/sot/core/derivator.hh b/include/sot/core/derivator.hh
index 82a7413a..ea72dcd9 100644
--- a/include/sot/core/derivator.hh
+++ b/include/sot/core/derivator.hh
@@ -20,6 +20,7 @@
 /* SOT */
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/flags.hh>
 #include <sot/core/matrix-geometry.hh>
 #include <sot/core/pool.hh>
@@ -34,20 +35,23 @@ namespace sot {
 /* --- CLASS ----------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 
-template <class T> class Derivator : public dynamicgraph::Entity {
+template <class T>
+class Derivator : public dynamicgraph::Entity {
   DYNAMIC_GRAPH_ENTITY_DECL();
 
-protected:
+ protected:
   T memory;
   bool initialized;
   double timestep;
-  static const double TIMESTEP_DEFAULT; //= 1.;
+  static const double TIMESTEP_DEFAULT;  //= 1.;
 
-public: /* --- CONSTRUCTION --- */
+ public: /* --- CONSTRUCTION --- */
   static std::string getTypeName(void) { return "Unknown"; }
 
   Derivator(const std::string &name)
-      : dynamicgraph::Entity(name), memory(), initialized(false),
+      : dynamicgraph::Entity(name),
+        memory(),
+        initialized(false),
         timestep(TIMESTEP_DEFAULT),
         SIN(NULL, "sotDerivator<" + getTypeName() + ">(" + name + ")::input(" +
                       getTypeName() + ")::sin"),
@@ -63,20 +67,19 @@ public: /* --- CONSTRUCTION --- */
 
   virtual ~Derivator(void){};
 
-public: /* --- SIGNAL --- */
+ public: /* --- SIGNAL --- */
   dynamicgraph::SignalPtr<T, int> SIN;
   dynamicgraph::SignalTimeDependent<T, int> SOUT;
   dynamicgraph::Signal<double, int> timestepSIN;
 
-protected:
+ protected:
   T &computeDerivation(T &res, int time) {
     if (initialized) {
       res = memory;
       res *= -1;
       memory = SIN(time);
       res += memory;
-      if (timestep != 1.)
-        res *= (1. / timestep);
+      if (timestep != 1.) res *= (1. / timestep);
     } else {
       initialized = true;
       memory = SIN(time);
@@ -88,16 +91,14 @@ protected:
 };
 // TODO Derivation of unit quaternion?
 template <>
-VectorQuaternion &
-Derivator<VectorQuaternion>::computeDerivation(VectorQuaternion &res,
-                                               int time) {
+VectorQuaternion &Derivator<VectorQuaternion>::computeDerivation(
+    VectorQuaternion &res, int time) {
   if (initialized) {
     res = memory;
     res.coeffs() *= -1;
     memory = SIN(time);
     res.coeffs() += memory.coeffs();
-    if (timestep != 1.)
-      res.coeffs() *= (1. / timestep);
+    if (timestep != 1.) res.coeffs() *= (1. / timestep);
   } else {
     initialized = true;
     memory = SIN(time);
@@ -110,4 +111,4 @@ Derivator<VectorQuaternion>::computeDerivation(VectorQuaternion &res,
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOT_DERIVATOR_H__
+#endif  // #ifndef __SOT_DERIVATOR_H__
diff --git a/include/sot/core/device.hh b/include/sot/core/device.hh
index eef2d4b8..ff9c2834 100644
--- a/include/sot/core/device.hh
+++ b/include/sot/core/device.hh
@@ -19,12 +19,14 @@
 #include <dynamic-graph/linear-algebra.h>
 
 /* SOT */
-#include "sot/core/api.hh"
-#include "sot/core/periodic-call.hh"
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/matrix-geometry.hh>
 
+#include "sot/core/api.hh"
+#include "sot/core/periodic-call.hh"
+
 namespace dynamicgraph {
 namespace sot {
 
@@ -43,7 +45,7 @@ const std::string ControlInput_s[] = {"noInteg", "oneInteg", "twoInteg"};
 /* --------------------------------------------------------------------- */
 
 class SOT_CORE_EXPORT Device : public Entity {
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
@@ -54,7 +56,7 @@ public:
     FORCE_SIGNAL_LARM
   };
 
-protected:
+ protected:
   dynamicgraph::Vector state_;
   dynamicgraph::Vector velocity_;
   bool sanityCheck_;
@@ -74,7 +76,7 @@ protected:
   Vector lowerVelocity_;
   Vector lowerTorque_;
   /// \}
-public:
+ public:
   /* --- CONSTRUCTION --- */
   Device(const std::string &name);
   /* --- DESTRUCTION --- */
@@ -100,7 +102,7 @@ public:
   PeriodicCall &periodicCallBefore() { return periodicCallBefore_; }
   PeriodicCall &periodicCallAfter() { return periodicCallAfter_; }
 
-public: /* --- DISPLAY --- */
+ public: /* --- DISPLAY --- */
   virtual void display(std::ostream &os) const;
   virtual void cmdDisplay();
   SOT_CORE_EXPORT friend std::ostream &operator<<(std::ostream &os,
@@ -109,7 +111,7 @@ public: /* --- DISPLAY --- */
     return os;
   }
 
-public: /* --- SIGNALS --- */
+ public: /* --- SIGNALS --- */
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> controlSIN;
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> attitudeSIN;
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> zmpSIN;
@@ -142,7 +144,7 @@ public: /* --- SIGNALS --- */
   dynamicgraph::Signal<dynamicgraph::Vector, int> pseudoTorqueSOUT;
   /// \}
 
-protected:
+ protected:
   /// Compute roll pitch yaw angles of freeflyer joint.
   void integrateRollPitchYaw(dynamicgraph::Vector &state,
                              const dynamicgraph::Vector &control, double dt);
@@ -162,20 +164,20 @@ protected:
   ///                 the joint torques for the given acceleration.
   virtual void integrate(const double &dt);
 
-protected:
+ protected:
   /// Get freeflyer pose
   const MatrixHomogeneous &freeFlyerPose() const;
 
-public:
+ public:
   virtual void setRoot(const dynamicgraph::Matrix &root);
 
   virtual void setRoot(const MatrixHomogeneous &worldMwaist);
 
-private:
+ private:
   // Intermediate variable to avoid dynamic allocation
   dynamicgraph::Vector forceZero6;
 };
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 #endif /* #ifndef SOT_DEVICE_HH */
diff --git a/include/sot/core/double-constant.hh b/include/sot/core/double-constant.hh
index eb6fcc4d..bf43efe2 100644
--- a/include/sot/core/double-constant.hh
+++ b/include/sot/core/double-constant.hh
@@ -10,14 +10,13 @@
 #define DYNAMICGRAPH_SOT_DOUBLE_CONSTANT_H
 
 #include <dynamic-graph/entity.h>
-
 #include <dynamic-graph/signal-time-dependent.h>
 
 namespace dynamicgraph {
 namespace sot {
 
 class DoubleConstant : public Entity {
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
@@ -31,7 +30,7 @@ public:
   void setValue(const double &inValue);
 };
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // DYNAMICGRAPH_SOT_DOUBLE_CONSTANT_H
+#endif  // DYNAMICGRAPH_SOT_DOUBLE_CONSTANT_H
diff --git a/include/sot/core/event.hh b/include/sot/core/event.hh
index 64633611..c2196aff 100644
--- a/include/sot/core/event.hh
+++ b/include/sot/core/event.hh
@@ -43,31 +43,34 @@ class SOT_CORE_DLLAPI Event : public dynamicgraph::Entity {
   DYNAMIC_GRAPH_ENTITY_DECL();
 
   Event(const std::string &name)
-      : Entity(name), checkSOUT("Event(" + name + ")::output(bool)::check"),
+      : Entity(name),
+        checkSOUT("Event(" + name + ")::output(bool)::check"),
         conditionSIN(NULL, "Event(" + name + ")::input(bool)::condition"),
-        lastVal_(2), // lastVal_ should be different true and false.
-    timeSinceUp_(0), repeatAfterNIterations_(0)
-  {
+        lastVal_(2),  // lastVal_ should be different true and false.
+        timeSinceUp_(0),
+        repeatAfterNIterations_(0) {
     checkSOUT.setFunction(boost::bind(&Event::check, this, _1, _2));
     signalRegistration(conditionSIN);
     signalRegistration(checkSOUT);
 
     using command::makeCommandVoid1;
-    std::string docstring = "\n"
-                            "    Add a signal\n";
+    std::string docstring =
+        "\n"
+        "    Add a signal\n";
     addCommand("addSignal",
                makeCommandVoid1(*this, &Event::addSignal, docstring));
 
-    docstring = "\n"
-                "    Get list of signals\n";
+    docstring =
+        "\n"
+        "    Get list of signals\n";
     addCommand("list", new command::Getter<Event, std::string>(
                            *this, &Event::getSignalsByName, docstring));
 
     docstring =
-      "\n"
-      "    Repease event if input signal remains True for a while\n"
-      "      Input: number of iterations before repeating output\n."
-      "        0 for no repetition";
+        "\n"
+        "    Repease event if input signal remains True for a while\n"
+        "      Input: number of iterations before repeating output\n."
+        "        0 for no repetition";
     addCommand("repeat", new command::Setter<Event, int>(*this, &Event::repeat,
                                                          docstring));
   }
@@ -97,11 +100,11 @@ class SOT_CORE_DLLAPI Event : public dynamicgraph::Entity {
     return oss.str();
   }
 
-  void repeat(const int& nbIterations)
-  {
+  void repeat(const int &nbIterations) {
     repeatAfterNIterations_ = nbIterations;
   }
-private:
+
+ private:
   typedef SignalBase<int> *Trigger_t;
   typedef std::vector<Trigger_t> Triggers_t;
 
@@ -115,6 +118,6 @@ private:
   bool lastVal_;
   int timeSinceUp_, repeatAfterNIterations_;
 };
-} // namespace sot
-} // namespace dynamicgraph
-#endif // __SOT_EVENT_H__
+}  // namespace sot
+}  // namespace dynamicgraph
+#endif  // __SOT_EVENT_H__
diff --git a/include/sot/core/exception-abstract.hh b/include/sot/core/exception-abstract.hh
index ec1de2cb..dc9c9071 100644
--- a/include/sot/core/exception-abstract.hh
+++ b/include/sot/core/exception-abstract.hh
@@ -15,11 +15,12 @@
 /* --------------------------------------------------------------------- */
 
 /* Classes standards. */
-#include "sot/core/api.hh"
 #include <exception>
 #include <ostream> /* Classe ostream.    */
 #include <string>  /* Classe string.     */
 
+#include "sot/core/api.hh"
+
 // Uncomment this macros to have lines parameter on the throw display
 // #define SOT_EXCEPTION_PASSING_PARAM
 
@@ -33,8 +34,7 @@ namespace sot {
 /* \class ExceptionAbstract
  */
 class SOT_CORE_EXPORT ExceptionAbstract : public std::exception {
-
-public:
+ public:
   enum ExceptionEnum {
     ABSTRACT = 0,
     SIGNAL = 100,
@@ -52,7 +52,7 @@ public:
     return EXCEPTION_NAME;
   }
 
-protected:
+ protected:
   /** Error code.
    * \sa ErrorCodeEnum */
   int code;
@@ -60,11 +60,11 @@ protected:
   /**  Error message (can be empty). */
   std::string message;
 
-private:
+ private:
   /**  forbid the empty constructor (private). */
   ExceptionAbstract(void);
 
-public:
+ public:
   ExceptionAbstract(const int &code, const std::string &msg = "");
   virtual ~ExceptionAbstract(void) throw() {}
 
@@ -85,9 +85,9 @@ public:
                                                   const ExceptionAbstract &err);
 
 #ifdef SOT_EXCEPTION_PASSING_PARAM
-public:
+ public:
   class Param {
-  public:
+   public:
     static const int BUFFER_SIZE = 80;
 
     const char *functionPTR;
@@ -97,13 +97,13 @@ public:
     char file[BUFFER_SIZE];
     bool pointersSet, set;
 
-  public:
+   public:
     Param(const int &_line, const char *_function, const char *_file);
     Param(void) : pointersSet(false), set(false) {}
     Param &initCopy(const Param &p);
   };
 
-protected:
+ protected:
   mutable Param p;
 
   template <class Exc>
@@ -116,18 +116,18 @@ protected:
     e.p.initCopy(p);
     return e;
   }
-#endif //#ifdef SOT_EXCEPTION_PASSING_PARAM
+#endif  //#ifdef SOT_EXCEPTION_PASSING_PARAM
 };
 
-#define SOT_RETHROW                                                            \
+#define SOT_RETHROW \
   (const ExceptionAbstract &err) { throw err; }
 
 #ifdef SOT_EXCEPTION_PASSING_PARAM
-#define SOT_THROW                                                              \
+#define SOT_THROW \
   throw ExceptionAbstract::Param(__LINE__, __FUNCTION__, __FILE__) +
-#else //#ifdef SOT_EXCEPTION_PASSING_PARAM
+#else  //#ifdef SOT_EXCEPTION_PASSING_PARAM
 #define SOT_THROW throw
-#endif //#ifdef SOT_EXCEPTION_PASSING_PARAM
+#endif  //#ifdef SOT_EXCEPTION_PASSING_PARAM
 
 } /* namespace sot */
 } /* namespace dynamicgraph */
diff --git a/include/sot/core/exception-dynamic.hh b/include/sot/core/exception-dynamic.hh
index 58d78fd6..30541528 100644
--- a/include/sot/core/exception-dynamic.hh
+++ b/include/sot/core/exception-dynamic.hh
@@ -14,8 +14,9 @@
 /* --- INCLUDE --------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 
-#include "sot/core/api.hh"
 #include <sot/core/exception-abstract.hh>
+
+#include "sot/core/api.hh"
 /* --------------------------------------------------------------------- */
 /* --- CLASS ----------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
@@ -28,7 +29,7 @@ namespace sot {
 class SOT_CORE_EXPORT ExceptionDynamic : public ExceptionAbstract
 
 {
-public:
+ public:
   enum ErrorCodeEnum {
     GENERIC = ExceptionAbstract::DYNAMIC
 
@@ -45,7 +46,7 @@ public:
     return EXCEPTION_NAME;
   }
 
-public:
+ public:
   ExceptionDynamic(const ExceptionDynamic::ErrorCodeEnum &errcode,
                    const std::string &msg = "");
   ExceptionDynamic(const ExceptionDynamic::ErrorCodeEnum &errcode,
diff --git a/include/sot/core/exception-factory.hh b/include/sot/core/exception-factory.hh
index e863bbef..c881b10a 100644
--- a/include/sot/core/exception-factory.hh
+++ b/include/sot/core/exception-factory.hh
@@ -14,8 +14,9 @@
 /* --- INCLUDE --------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 
-#include "sot/core/api.hh"
 #include <sot/core/exception-abstract.hh>
+
+#include "sot/core/api.hh"
 /* --------------------------------------------------------------------- */
 /* --- CLASS ----------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
@@ -28,7 +29,7 @@ namespace sot {
 class SOT_CORE_EXPORT ExceptionFactory : public ExceptionAbstract
 
 {
-public:
+ public:
   enum ErrorCodeEnum {
     GENERIC = ExceptionAbstract::FACTORY,
     UNREFERED_OBJECT,
@@ -38,8 +39,8 @@ public:
     SIGNAL_CONFLICT,
     FUNCTION_CONFLICT,
     OBJECT_CONFLICT,
-    SYNTAX_ERROR // j' aime bien FATAL_ERROR aussi faut que je la case qq
-                 // part...
+    SYNTAX_ERROR  // j' aime bien FATAL_ERROR aussi faut que je la case qq
+                  // part...
     ,
     READ_FILE
   };
diff --git a/include/sot/core/exception-feature.hh b/include/sot/core/exception-feature.hh
index 02ae7688..0ea70979 100644
--- a/include/sot/core/exception-feature.hh
+++ b/include/sot/core/exception-feature.hh
@@ -14,8 +14,9 @@
 /* --- INCLUDE --------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 
-#include "sot/core/api.hh"
 #include <sot/core/exception-abstract.hh>
+
+#include "sot/core/api.hh"
 /* --------------------------------------------------------------------- */
 /* --- CLASS ----------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
@@ -28,7 +29,7 @@ namespace sot {
 class SOT_CORE_EXPORT ExceptionFeature : public ExceptionAbstract
 
 {
-public:
+ public:
   enum ErrorCodeEnum {
     GENERIC = ExceptionAbstract::FEATURE,
     BAD_INIT,
diff --git a/include/sot/core/exception-signal.hh b/include/sot/core/exception-signal.hh
index 800a8bda..3e7eb628 100644
--- a/include/sot/core/exception-signal.hh
+++ b/include/sot/core/exception-signal.hh
@@ -14,8 +14,9 @@
 /* --- INCLUDE --------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 
-#include "sot/core/api.hh"
 #include <sot/core/exception-abstract.hh>
+
+#include "sot/core/api.hh"
 /* --------------------------------------------------------------------- */
 /* --- CLASS ----------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
@@ -28,7 +29,7 @@ namespace sot {
 class SOT_CORE_EXPORT ExceptionSignal : public ExceptionAbstract
 
 {
-public:
+ public:
   enum ErrorCodeEnum {
     GENERIC = ExceptionAbstract::SIGNAL
 
@@ -46,7 +47,7 @@ public:
     return EXCEPTION_NAME;
   }
 
-public:
+ public:
   ExceptionSignal(const ExceptionSignal::ErrorCodeEnum &errcode,
                   const std::string &msg = "");
   ExceptionSignal(const ExceptionSignal::ErrorCodeEnum &errcode,
diff --git a/include/sot/core/exception-task.hh b/include/sot/core/exception-task.hh
index e8f9a0be..e8fdc09c 100644
--- a/include/sot/core/exception-task.hh
+++ b/include/sot/core/exception-task.hh
@@ -14,8 +14,9 @@
 /* --- INCLUDE --------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 
-#include "sot/core/api.hh"
 #include <sot/core/exception-abstract.hh>
+
+#include "sot/core/api.hh"
 /* --------------------------------------------------------------------- */
 /* --- CLASS ----------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
@@ -28,7 +29,7 @@ namespace sot {
 class SOT_CORE_EXPORT ExceptionTask : public ExceptionAbstract
 
 {
-public:
+ public:
   enum ErrorCodeEnum {
     GENERIC = ExceptionAbstract::TASK,
     EMPTY_LIST,
diff --git a/include/sot/core/exception-tools.hh b/include/sot/core/exception-tools.hh
index 29600e17..329d85c4 100644
--- a/include/sot/core/exception-tools.hh
+++ b/include/sot/core/exception-tools.hh
@@ -14,8 +14,9 @@
 /* --- INCLUDE --------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 
-#include "sot/core/api.hh"
 #include <sot/core/exception-abstract.hh>
+
+#include "sot/core/api.hh"
 /* --------------------------------------------------------------------- */
 /* --- CLASS ----------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
@@ -28,7 +29,7 @@ namespace sot {
 class SOT_CORE_EXPORT ExceptionTools : public ExceptionAbstract
 
 {
-public:
+ public:
   enum ErrorCodeEnum {
     GENERIC = ExceptionAbstract::TOOLS
 
@@ -41,7 +42,7 @@ public:
   static const std::string EXCEPTION_NAME;
   virtual const std::string &getExceptionName() const { return EXCEPTION_NAME; }
 
-public:
+ public:
   ExceptionTools(const ExceptionTools::ErrorCodeEnum &errcode,
                  const std::string &msg = "");
   ExceptionTools(const ExceptionTools::ErrorCodeEnum &errcode,
@@ -49,8 +50,8 @@ public:
   virtual ~ExceptionTools(void) throw() {}
 };
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 #endif /* #ifndef __SOT_TOOLS_EXCEPTION_H */
 
diff --git a/include/sot/core/exp-moving-avg.hh b/include/sot/core/exp-moving-avg.hh
index de48d5f3..c845d2cb 100644
--- a/include/sot/core/exp-moving-avg.hh
+++ b/include/sot/core/exp-moving-avg.hh
@@ -16,6 +16,7 @@
 #include <dynamic-graph/entity.h>
 #include <dynamic-graph/signal-ptr.h>
 #include <dynamic-graph/signal-time-dependent.h>
+
 #include <sot/core/config.hh>
 
 namespace dynamicgraph {
@@ -32,18 +33,18 @@ using dynamicgraph::SignalTimeDependent;
 class SOT_CORE_DLLAPI ExpMovingAvg : public Entity {
   DYNAMIC_GRAPH_ENTITY_DECL();
 
-public:
+ public:
   SignalPtr<dynamicgraph::Vector, int> updateSIN;
   SignalTimeDependent<int, int> refresherSINTERN;
   SignalTimeDependent<dynamicgraph::Vector, int> averageSOUT;
 
-public:
+ public:
   ExpMovingAvg(const std::string &n);
   virtual ~ExpMovingAvg(void);
 
   void setAlpha(const double &alpha_);
 
-protected:
+ protected:
   dynamicgraph::Vector &update(dynamicgraph::Vector &res, const int &inTime);
 
   dynamicgraph::Vector average;
diff --git a/include/sot/core/factory.hh b/include/sot/core/factory.hh
index 89e9edcb..2b7b9991 100644
--- a/include/sot/core/factory.hh
+++ b/include/sot/core/factory.hh
@@ -17,13 +17,13 @@
 
 #include <dynamic-graph/factory.h>
 
-#define SOT_FACTORY_FEATURE_PLUGIN(sotFeatureType, className)                  \
+#define SOT_FACTORY_FEATURE_PLUGIN(sotFeatureType, className) \
   DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(sotFeatureType, className)
 /* -------------------------------------------------------------------------- */
 /* --- TASK REGISTERER ------------------------------------------------------ */
 /* -------------------------------------------------------------------------- */
 
-#define SOT_FACTORY_TASK_PLUGIN(sotTaskType, className)                        \
+#define SOT_FACTORY_TASK_PLUGIN(sotTaskType, className) \
   DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(sotTaskType, className)
 
 #endif /* #ifndef __SOT_FACTORY_HH__ */
diff --git a/include/sot/core/feature-1d.hh b/include/sot/core/feature-1d.hh
index ee7808d9..02791c57 100644
--- a/include/sot/core/feature-1d.hh
+++ b/include/sot/core/feature-1d.hh
@@ -47,16 +47,15 @@ namespace sot {
 */
 class SOTFEATURE1D_EXPORT Feature1D : public FeatureAbstract,
                                       FeatureReferenceHelper<Feature1D> {
-
-public:
+ public:
   /*! Field storing the class name. */
   static const std::string CLASS_NAME;
   /*! Returns the name of the class. */
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-protected:
+ protected:
   /* --- SIGNALS ------------------------------------------------------------ */
-public:
+ public:
   /*! \name Signals
     @{
   */
@@ -82,7 +81,7 @@ public:
    * feature. */
   using FeatureAbstract::errorSOUT;
 
-public:
+ public:
   /*! \brief Default constructor */
   Feature1D(const std::string &name);
 
@@ -120,7 +119,7 @@ public:
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOT_FEATURE_1D_HH__
+#endif  // #ifndef __SOT_FEATURE_1D_HH__
 
 /*
  * Local variables:
diff --git a/include/sot/core/feature-abstract.hh b/include/sot/core/feature-abstract.hh
index 1c77d316..18fea959 100644
--- a/include/sot/core/feature-abstract.hh
+++ b/include/sot/core/feature-abstract.hh
@@ -18,12 +18,14 @@
 #include <dynamic-graph/linear-algebra.h>
 
 /* SOT */
-#include "sot/core/api.hh"
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/flags.hh>
 #include <sot/core/pool.hh>
 
+#include "sot/core/api.hh"
+
 /* STD */
 #include <string>
 
@@ -72,7 +74,7 @@ namespace sot {
 
 */
 class SOT_CORE_EXPORT FeatureAbstract : public Entity {
-public:
+ public:
   /*! \brief Store the name of the class. */
   static const std::string CLASS_NAME;
 
@@ -84,7 +86,7 @@ public:
 
   void initCommands(void);
 
-public:
+ public:
   /*! \brief Default constructor: the name of the class should be given. */
   FeatureAbstract(const std::string &name);
   /*! \brief Default destructor */
@@ -156,7 +158,7 @@ public:
   /*! @} */
 
   /* --- SIGNALS ------------------------------------------------------------ */
-public:
+ public:
   /*! \name Signals
     @{
   */
@@ -204,7 +206,7 @@ public:
   /*! @} */
 
   /* --- REFERENCE VALUE S* ------------------------------------------------- */
-public:
+ public:
   /*! \name Reference
     @{
   */
@@ -223,11 +225,12 @@ public:
   /*! @} */
 };
 
-template <class FeatureSpecialized> class FeatureReferenceHelper {
+template <class FeatureSpecialized>
+class FeatureReferenceHelper {
   FeatureSpecialized *ptr;
   FeatureAbstract *ptrA;
 
-public:
+ public:
   FeatureReferenceHelper(void) : ptr(NULL) {}
 
   void setReference(FeatureAbstract *sdes);
@@ -245,44 +248,42 @@ void FeatureReferenceHelper<FeatureSpecialized>::setReference(
   ptrA = ptr;
 }
 
-#define DECLARE_REFERENCE_FUNCTIONS(FeatureSpecialized)                        \
-  typedef FeatureReferenceHelper<FeatureSpecialized> SP;                       \
-  virtual void setReference(FeatureAbstract *sdes) {                           \
-    if (sdes == NULL) {                                                        \
-      /* UNSET */                                                              \
-      if (SP::isReferenceSet())                                                \
-        removeDependenciesFromReference();                                     \
-      SP::unsetReference();                                                    \
-    } else {                                                                   \
-      /* SET */                                                                \
-      SP::setReference(sdes);                                                  \
-      if (SP::isReferenceSet())                                                \
-        addDependenciesFromReference();                                        \
-    }                                                                          \
-  }                                                                            \
-  virtual const FeatureAbstract *getReferenceAbstract(void) const {            \
-    return SP::getReference();                                                 \
-  }                                                                            \
-  virtual FeatureAbstract *getReferenceAbstract(void) {                        \
-    return (FeatureAbstract *)SP::getReference();                              \
-  }                                                                            \
-  bool isReferenceSet(void) const { return SP::isReferenceSet(); }             \
-  virtual void addDependenciesFromReference(void);                             \
+#define DECLARE_REFERENCE_FUNCTIONS(FeatureSpecialized)             \
+  typedef FeatureReferenceHelper<FeatureSpecialized> SP;            \
+  virtual void setReference(FeatureAbstract *sdes) {                \
+    if (sdes == NULL) {                                             \
+      /* UNSET */                                                   \
+      if (SP::isReferenceSet()) removeDependenciesFromReference();  \
+      SP::unsetReference();                                         \
+    } else {                                                        \
+      /* SET */                                                     \
+      SP::setReference(sdes);                                       \
+      if (SP::isReferenceSet()) addDependenciesFromReference();     \
+    }                                                               \
+  }                                                                 \
+  virtual const FeatureAbstract *getReferenceAbstract(void) const { \
+    return SP::getReference();                                      \
+  }                                                                 \
+  virtual FeatureAbstract *getReferenceAbstract(void) {             \
+    return (FeatureAbstract *)SP::getReference();                   \
+  }                                                                 \
+  bool isReferenceSet(void) const { return SP::isReferenceSet(); }  \
+  virtual void addDependenciesFromReference(void);                  \
   virtual void removeDependenciesFromReference(void)
 /* END OF define DECLARE_REFERENCE_FUNCTIONS */
 
-#define DECLARE_NO_REFERENCE                                                   \
-  virtual void setReference(FeatureAbstract *) {}                              \
-  virtual const FeatureAbstract *getReferenceAbstract(void) const {            \
-    return NULL;                                                               \
-  }                                                                            \
-  virtual FeatureAbstract *getReferenceAbstract(void) { return NULL; }         \
-  virtual void addDependenciesFromReference(void) {}                           \
-  virtual void removeDependenciesFromReference(void) {}                        \
+#define DECLARE_NO_REFERENCE                                           \
+  virtual void setReference(FeatureAbstract *) {}                      \
+  virtual const FeatureAbstract *getReferenceAbstract(void) const {    \
+    return NULL;                                                       \
+  }                                                                    \
+  virtual FeatureAbstract *getReferenceAbstract(void) { return NULL; } \
+  virtual void addDependenciesFromReference(void) {}                   \
+  virtual void removeDependenciesFromReference(void) {}                \
   /* To force a ; */ bool NO_REFERENCE
 /* END OF define DECLARE_REFERENCE_FUNCTIONS */
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // #ifndef __SOT_FEATURE_ABSTRACT_H__
+#endif  // #ifndef __SOT_FEATURE_ABSTRACT_H__
diff --git a/include/sot/core/feature-generic.hh b/include/sot/core/feature-generic.hh
index 2f1d0067..70ad7154 100644
--- a/include/sot/core/feature-generic.hh
+++ b/include/sot/core/feature-generic.hh
@@ -56,18 +56,17 @@ namespace sot {
 class SOTFEATUREGENERIC_EXPORT FeatureGeneric
     : public FeatureAbstract,
       FeatureReferenceHelper<FeatureGeneric> {
-
-public:
+ public:
   /*! Field storing the class name. */
   static const std::string CLASS_NAME;
   /*! Returns the name of the class. */
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-protected:
+ protected:
   dynamicgraph::Vector::Index dimensionDefault;
 
   /* --- SIGNALS ------------------------------------------------------------ */
-public:
+ public:
   /*! \name dynamicgraph::Signals
     @{
   */
@@ -93,7 +92,7 @@ public:
       feature. */
   using FeatureAbstract::errorSOUT;
 
-public:
+ public:
   /*! \brief Default constructor */
   FeatureGeneric(const std::string &name);
 
@@ -131,7 +130,7 @@ public:
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOT_FEATURE_GENERIC_HH__
+#endif  // #ifndef __SOT_FEATURE_GENERIC_HH__
 
 /*
  * Local variables:
diff --git a/include/sot/core/feature-joint-limits.hh b/include/sot/core/feature-joint-limits.hh
index 7c670d61..33dd27c9 100644
--- a/include/sot/core/feature-joint-limits.hh
+++ b/include/sot/core/feature-joint-limits.hh
@@ -46,21 +46,20 @@ namespace sot {
 class SOTFEATUREJOINTLIMITS_EXPORT FeatureJointLimits
     : public FeatureAbstract,
       FeatureReferenceHelper<FeatureJointLimits> {
-
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-protected:
+ protected:
   double threshold;
-  const static double THRESHOLD_DEFAULT; // = .9;
+  const static double THRESHOLD_DEFAULT;  // = .9;
 
   /*   unsigned int freeFloatingIndex,freeFloatingSize; */
   /*   static const unsigned int FREE_FLOATING_INDEX = 0; */
   /*   static const unsigned int FREE_FLOATING_SIZE = 5; */
 
   /* --- SIGNALS ------------------------------------------------------------ */
-public:
+ public:
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> jointSIN;
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> upperJlSIN;
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> lowerJlSIN;
@@ -77,7 +76,7 @@ public:
   DECLARE_REFERENCE_FUNCTIONS(FeatureJointLimits);
   /*! @} */
 
-public:
+ public:
   FeatureJointLimits(const std::string &name);
   virtual ~FeatureJointLimits(void) {}
 
@@ -99,7 +98,7 @@ public:
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOT_FEATURE_JOINTLIMITS_HH__
+#endif  // #ifndef __SOT_FEATURE_JOINTLIMITS_HH__
 
 /*
  * Local variables:
diff --git a/include/sot/core/feature-line-distance.hh b/include/sot/core/feature-line-distance.hh
index 6aa7002f..ac124d32 100644
--- a/include/sot/core/feature-line-distance.hh
+++ b/include/sot/core/feature-line-distance.hh
@@ -45,14 +45,13 @@ namespace sot {
 */
 class SOTFEATURELINEDISTANCE_EXPORT FeatureLineDistance
     : public FeatureAbstract {
-
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-protected:
+ protected:
   /* --- SIGNALS ------------------------------------------------------------ */
-public:
+ public:
   dynamicgraph::SignalPtr<MatrixHomogeneous, int> positionSIN;
   dynamicgraph::SignalPtr<dynamicgraph::Matrix, int> articularJacobianSIN;
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> positionRefSIN;
@@ -69,7 +68,7 @@ public:
   DECLARE_NO_REFERENCE;
   /*! @} */
 
-public:
+ public:
   FeatureLineDistance(const std::string &name);
   virtual ~FeatureLineDistance(void) {}
 
@@ -88,7 +87,7 @@ public:
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOT_FEATURE_LINEDISTANCE_HH__
+#endif  // #ifndef __SOT_FEATURE_LINEDISTANCE_HH__
 
 /*
  * Local variables:
diff --git a/include/sot/core/feature-point6d-relative.hh b/include/sot/core/feature-point6d-relative.hh
index 3fef8089..260e675a 100644
--- a/include/sot/core/feature-point6d-relative.hh
+++ b/include/sot/core/feature-point6d-relative.hh
@@ -47,18 +47,17 @@ namespace sot {
   point.
   \deprecated This class was replaced by FeaturePose.
 */
-class[[deprecated("replaced by FeaturePose")]] SOTFEATUREPOINT6DRELATIVE_EXPORT
+class [[deprecated("replaced by FeaturePose")]] SOTFEATUREPOINT6DRELATIVE_EXPORT
     FeaturePoint6dRelative : public FeaturePoint6d {
-
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-protected:
+ protected:
   dynamicgraph::Matrix L;
 
   /* --- SIGNALS ------------------------------------------------------------ */
-public:
+ public:
   dynamicgraph::SignalPtr<MatrixHomogeneous, int> positionReferenceSIN;
   dynamicgraph::SignalPtr<dynamicgraph::Matrix, int>
       articularJacobianReferenceSIN;
@@ -77,7 +76,7 @@ public:
 
   using FeaturePoint6d::getReference;
 
-public:
+ public:
   FeaturePoint6dRelative(const std::string &name);
   virtual ~FeaturePoint6dRelative(void) {}
 
@@ -97,7 +96,7 @@ public:
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOT_FEATURE_POINT6DRELATIVE_HH__
+#endif  // #ifndef __SOT_FEATURE_POINT6DRELATIVE_HH__
 
 /*
  * Local variables:
diff --git a/include/sot/core/feature-point6d.hh b/include/sot/core/feature-point6d.hh
index 5eefad27..10c65fc4 100644
--- a/include/sot/core/feature-point6d.hh
+++ b/include/sot/core/feature-point6d.hh
@@ -46,30 +46,30 @@ namespace sot {
   \brief Class that defines point-6d control feature.
   \deprecated This class was replaced by FeaturePose.
 */
-class[[deprecated("replaced by FeaturePose")]] SOTFEATUREPOINT6D_EXPORT
-    FeaturePoint6d : public FeatureAbstract,
-                     public FeatureReferenceHelper<FeaturePoint6d> {
-
-public:
+class [[deprecated(
+    "replaced by FeaturePose")]] SOTFEATUREPOINT6D_EXPORT FeaturePoint6d
+    : public FeatureAbstract,
+      public FeatureReferenceHelper<FeaturePoint6d> {
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
   /* --- Frame type --------------------------------------------------------- */
-protected:
+ protected:
   enum ComputationFrameType { FRAME_DESIRED, FRAME_CURRENT };
   static const ComputationFrameType COMPUTATION_FRAME_DEFAULT;
 
-public:
+ public:
   /// \brief Set computation frame
   void computationFrame(const std::string &inFrame);
   /// \brief Get computation frame
   std::string computationFrame() const;
 
-private:
+ private:
   ComputationFrameType computationFrame_;
 
   /* --- SIGNALS ------------------------------------------------------------ */
-public:
+ public:
   dynamicgraph::SignalPtr<MatrixHomogeneous, int> positionSIN;
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> velocitySIN;
   dynamicgraph::SignalPtr<dynamicgraph::Matrix, int> articularJacobianSIN;
@@ -83,7 +83,7 @@ public:
   DECLARE_REFERENCE_FUNCTIONS(FeaturePoint6d);
   /*! @} */
 
-public:
+ public:
   FeaturePoint6d(const std::string &name);
   virtual ~FeaturePoint6d(void) {}
 
@@ -109,10 +109,10 @@ public:
 
   virtual void display(std::ostream & os) const;
 
-public:
+ public:
   void servoCurrentPosition(void);
 
-private:
+ private:
   // Intermediate variables for internal computations
   Eigen::Vector3d v_, omega_, errordot_t_, errordot_th_, Rreftomega_, t_, tref_;
   VectorUTheta error_th_;
@@ -125,7 +125,7 @@ private:
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOT_FEATURE_POINT6D_HH__
+#endif  // #ifndef __SOT_FEATURE_POINT6D_HH__
 
 /*
  * Local variables:
diff --git a/include/sot/core/feature-pose.hh b/include/sot/core/feature-pose.hh
index 63e36101..3a0a168b 100644
--- a/include/sot/core/feature-pose.hh
+++ b/include/sot/core/feature-pose.hh
@@ -60,12 +60,11 @@ enum Representation_t { SE3Representation, R3xSO3Representation };
 */
 template <Representation_t representation = R3xSO3Representation>
 class SOT_CORE_DLLAPI FeaturePose : public FeatureAbstract {
-
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-public:
+ public:
   /*! \name Input signals
     @{
   */
@@ -113,7 +112,7 @@ public:
   DECLARE_NO_REFERENCE();
   /*! @} */
 
-public:
+ public:
   FeaturePose(const std::string &name);
   virtual ~FeaturePose(void);
 
@@ -141,10 +140,10 @@ public:
 
   virtual void display(std::ostream &os) const;
 
-public:
+ public:
   void servoCurrentPosition(const int &time);
 
-private:
+ private:
   MatrixHomogeneous &computefaMfb(MatrixHomogeneous &res, int time);
   Vector7 &computeQfaMfb(Vector7 &res, int time);
   Vector7 &computeQfaMfbDes(Vector7 &res, int time);
@@ -157,8 +156,10 @@ Vector6d convertVelocity(const MatrixHomogeneous &M,
                          const MatrixHomogeneous &Mdes,
                          const Vector &faNufafbDes);
 
-template <> const std::string FeaturePose<SE3Representation>::CLASS_NAME;
-template <> const std::string FeaturePose<R3xSO3Representation>::CLASS_NAME;
+template <>
+const std::string FeaturePose<SE3Representation>::CLASS_NAME;
+template <>
+const std::string FeaturePose<R3xSO3Representation>::CLASS_NAME;
 
 #if __cplusplus >= 201103L
 extern template class FeaturePose<SE3Representation>;
@@ -171,7 +172,7 @@ typedef FeaturePose<SE3Representation> FeaturePoseSE3_t;
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOT_FEATURE_POSE_HH__
+#endif  // #ifndef __SOT_FEATURE_POSE_HH__
 
 /*
  * Local variables:
diff --git a/include/sot/core/feature-pose.hxx b/include/sot/core/feature-pose.hxx
index 7ba9f507..d335ce40 100644
--- a/include/sot/core/feature-pose.hxx
+++ b/include/sot/core/feature-pose.hxx
@@ -11,18 +11,15 @@
 /* --------------------------------------------------------------------- */
 
 /* --- SOT --- */
-#include <boost/mpl/if.hpp>
-#include <boost/type_traits/is_same.hpp>
-
 #include <dynamic-graph/command-bind.h>
 #include <dynamic-graph/command-getter.h>
 #include <dynamic-graph/command-setter.h>
 #include <dynamic-graph/command.h>
 
-#include <pinocchio/multibody/liegroup/liegroup.hpp>
-
 #include <Eigen/LU>
-
+#include <boost/mpl/if.hpp>
+#include <boost/type_traits/is_same.hpp>
+#include <pinocchio/multibody/liegroup/liegroup.hpp>
 #include <sot/core/debug.hh>
 #include <sot/core/factory.hh>
 #include <sot/core/feature-pose.hh>
@@ -37,11 +34,12 @@ typedef pinocchio::CartesianProductOperation<
 typedef pinocchio::SpecialEuclideanOperationTpl<3, double> SE3_t;
 
 namespace internal {
-template <Representation_t representation> struct LG_t {
+template <Representation_t representation>
+struct LG_t {
   typedef typename boost::mpl::if_c<representation == SE3Representation, SE3_t,
                                     R3xSO3_t>::type type;
 };
-} // namespace internal
+}  // namespace internal
 
 /* --------------------------------------------------------------------- */
 /* --- CLASS ----------------------------------------------------------- */
@@ -130,8 +128,7 @@ unsigned int &FeaturePose<representation>::getDimension(unsigned int &dim,
 
   dim = 0;
   for (int i = 0; i < 6; ++i)
-    if (fl(i))
-      dim++;
+    if (fl(i)) dim++;
 
   sotDEBUG(25) << "# Out }" << std::endl;
   return dim;
@@ -184,8 +181,7 @@ Matrix &FeaturePose<representation>::computeJacobian(Matrix &J, int time) {
   // J = Jminus * X * jbJjb;
   unsigned int rJ = 0;
   for (unsigned int r = 0; r < 6; ++r)
-    if (fl((int)r))
-      J.row(rJ++) = (Jminus * X).row(r) * _jbJjb;
+    if (fl((int)r)) J.row(rJ++) = (Jminus * X).row(r) * _jbJjb;
 
   if (jaJja.isPlugged()) {
     const Matrix &_jaJja = jaJja(time);
@@ -200,16 +196,15 @@ Matrix &FeaturePose<representation>::computeJacobian(Matrix &J, int time) {
     // J -= (Jminus * X) * jaJja(time);
     rJ = 0;
     for (unsigned int r = 0; r < 6; ++r)
-      if (fl((int)r))
-        J.row(rJ++).noalias() -= (Jminus * X).row(r) * _jaJja;
+      if (fl((int)r)) J.row(rJ++).noalias() -= (Jminus * X).row(r) * _jaJja;
   }
 
   return J;
 }
 
 template <Representation_t representation>
-MatrixHomogeneous &
-FeaturePose<representation>::computefaMfb(MatrixHomogeneous &res, int time) {
+MatrixHomogeneous &FeaturePose<representation>::computefaMfb(
+    MatrixHomogeneous &res, int time) {
   check(*this);
 
   res = (oMja(time) * jaMfa(time)).inverse(Eigen::Affine) * oMjb(time) *
@@ -246,8 +241,7 @@ Vector &FeaturePose<representation>::computeError(Vector &error, int time) {
   error.resize(dimensionSOUT(time));
   unsigned int cursor = 0;
   for (unsigned int i = 0; i < 6; ++i)
-    if (fl((int)i))
-      error(cursor++) = v(i);
+    if (fl((int)i)) error(cursor++) = v(i);
 
   return error;
 }
@@ -302,8 +296,7 @@ Vector &FeaturePose<representation>::computeErrorDot(Vector &errordot,
                                             faNufafbDes.accessCopy());
   unsigned int cursor = 0;
   for (unsigned int i = 0; i < 6; ++i)
-    if (fl((int)i))
-      errordot(cursor++) = Jminus.row(i) * nu;
+    if (fl((int)i)) errordot(cursor++) = Jminus.row(i) * nu;
 
   return errordot;
 }
@@ -347,5 +340,5 @@ void FeaturePose<representation>::display(std::ostream &os) const {
   }
 }
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
diff --git a/include/sot/core/feature-posture.hh b/include/sot/core/feature-posture.hh
index fe78576d..d89054c9 100644
--- a/include/sot/core/feature-posture.hh
+++ b/include/sot/core/feature-posture.hh
@@ -10,11 +10,12 @@
 #ifndef SOT_CORE_FEATURE_POSTURE_HH
 #define SOT_CORE_FEATURE_POSTURE_HH
 
-#include "sot/core/api.hh"
-#include "sot/core/feature-abstract.hh"
 #include <dynamic-graph/signal-ptr.h>
 #include <dynamic-graph/signal-time-dependent.h>
 #include <dynamic-graph/value.h>
+
+#include "sot/core/api.hh"
+#include "sot/core/feature-abstract.hh"
 /* --------------------------------------------------------------------- */
 /* --- API ------------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
@@ -51,7 +52,7 @@ class SOTFEATUREPOSTURE_EXPORT FeaturePosture : public FeatureAbstract {
 
   DYNAMIC_GRAPH_ENTITY_DECL();
 
-public:
+ public:
   typedef dynamicgraph::SignalPtr<dynamicgraph::Vector, int> signalIn_t;
   typedef dynamicgraph::SignalTimeDependent<dynamicgraph::Vector, int>
       signalOut_t;
@@ -63,7 +64,7 @@ public:
   virtual unsigned int &getDimension(unsigned int &res, int);
   void selectDof(unsigned dofId, bool control);
 
-protected:
+ protected:
   virtual dynamicgraph::Vector &computeError(dynamicgraph::Vector &res, int);
   virtual dynamicgraph::Matrix &computeJacobian(dynamicgraph::Matrix &res, int);
   virtual dynamicgraph::Vector &computeErrorDot(dynamicgraph::Vector &res,
@@ -74,11 +75,11 @@ protected:
   signalIn_t postureDot_;
   signalOut_t error_;
 
-private:
+ private:
   std::vector<bool> activeDofs_;
   std::size_t nbActiveDofs_;
-}; // class FeaturePosture
-} // namespace sot
-} // namespace dynamicgraph
+};  // class FeaturePosture
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // SOT_CORE_FEATURE_POSTURE_HH
+#endif  // SOT_CORE_FEATURE_POSTURE_HH
diff --git a/include/sot/core/feature-task.hh b/include/sot/core/feature-task.hh
index d4f1912c..2c853fd2 100644
--- a/include/sot/core/feature-task.hh
+++ b/include/sot/core/feature-task.hh
@@ -41,19 +41,18 @@ namespace dynamicgraph {
 namespace sot {
 
 class SOTFEATURETASK_EXPORT FeatureTask : public FeatureGeneric {
-
-public:
+ public:
   /*! Field storing the class name. */
   static const std::string CLASS_NAME;
   /*! Returns the name of the class. */
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-protected:
+ protected:
   TaskAbstract *taskPtr;
 
   /* --- SIGNALS ------------------------------------------------------------ */
-public:
-public:
+ public:
+ public:
   /*! \brief Default constructor */
   FeatureTask(const std::string &name);
 
@@ -67,7 +66,7 @@ public:
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOT_FEATURE_TASK_HH__
+#endif  // #ifndef __SOT_FEATURE_TASK_HH__
 
 /*
  * Local variables:
diff --git a/include/sot/core/feature-vector3.hh b/include/sot/core/feature-vector3.hh
index 7ed5e5e7..45846ced 100644
--- a/include/sot/core/feature-vector3.hh
+++ b/include/sot/core/feature-vector3.hh
@@ -45,16 +45,15 @@ namespace sot {
   \brief Class that defines point-3d control feature
 */
 class SOTFEATUREVECTOR3_EXPORT FeatureVector3 : public FeatureAbstract {
-
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
   DECLARE_NO_REFERENCE;
 
-protected:
+ protected:
   /* --- SIGNALS ------------------------------------------------------------ */
-public:
+ public:
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> vectorSIN;
   dynamicgraph::SignalPtr<MatrixHomogeneous, int> positionSIN;
   dynamicgraph::SignalPtr<dynamicgraph::Matrix, int> articularJacobianSIN;
@@ -64,7 +63,7 @@ public:
   using FeatureAbstract::jacobianSOUT;
   using FeatureAbstract::selectionSIN;
 
-public:
+ public:
   FeatureVector3(const std::string &name);
   virtual ~FeatureVector3(void) {}
 
@@ -81,7 +80,7 @@ public:
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOT_FEATURE_VECTOR3_HH__
+#endif  // #ifndef __SOT_FEATURE_VECTOR3_HH__
 
 /*
  * Local variables:
diff --git a/include/sot/core/feature-visual-point.hh b/include/sot/core/feature-visual-point.hh
index aaff6c8e..b5fbe951 100644
--- a/include/sot/core/feature-visual-point.hh
+++ b/include/sot/core/feature-visual-point.hh
@@ -46,16 +46,15 @@ namespace sot {
 class SOTFEATUREVISUALPOINT_EXPORT FeatureVisualPoint
     : public FeatureAbstract,
       public FeatureReferenceHelper<FeatureVisualPoint> {
-
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-protected:
+ protected:
   dynamicgraph::Matrix L;
 
   /* --- SIGNALS ------------------------------------------------------------ */
-public:
+ public:
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> xySIN;
   /** FeatureVisualPoint depth (required to compute the interaction matrix)
    * default Z = 1m. */
@@ -68,7 +67,7 @@ public:
 
   DECLARE_REFERENCE_FUNCTIONS(FeatureVisualPoint);
 
-public:
+ public:
   FeatureVisualPoint(const std::string &name);
   virtual ~FeatureVisualPoint(void) {}
 
@@ -89,7 +88,7 @@ public:
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOT_FEATURE_VISUALPOINT_HH__
+#endif  // #ifndef __SOT_FEATURE_VISUALPOINT_HH__
 
 /*
  * Local variables:
diff --git a/include/sot/core/filter-differentiator.hh b/include/sot/core/filter-differentiator.hh
index 634d20fe..5bbbb6bc 100644
--- a/include/sot/core/filter-differentiator.hh
+++ b/include/sot/core/filter-differentiator.hh
@@ -39,6 +39,7 @@
 
 /* HELPER */
 #include <dynamic-graph/signal-helper.h>
+
 #include <sot/core/causal-filter.hh>
 #include <sot/core/stop-watch.hh>
 
@@ -58,8 +59,8 @@ class SOTFILTERDIFFERENTIATOR_EXPORT FilterDifferentiator
     : public ::dynamicgraph::Entity {
   DYNAMIC_GRAPH_ENTITY_DECL();
 
-public: /* --- SIGNALS --- */
-        /// Input signals
+ public: /* --- SIGNALS --- */
+         /// Input signals
   DECLARE_SIGNAL_IN(x, dynamicgraph::Vector);
   /// Output signal x_filtered
   DECLARE_SIGNAL_OUT(x_filtered, dynamicgraph::Vector);
@@ -81,14 +82,14 @@ public: /* --- SIGNALS --- */
   /// accelerations.
   DECLARE_SIGNAL_INNER(x_dx_ddx, dynamicgraph::Vector);
 
-protected:
-  double m_dt; /// sampling timestep of the input signal
+ protected:
+  double m_dt;  /// sampling timestep of the input signal
   int m_x_size;
 
   /// polynomial-fitting filters
   CausalFilter *m_filter;
 
-public:
+ public:
   EIGEN_MAKE_ALIGNED_OPERATOR_NEW
 
   /** --- CONSTRUCTOR ---- */
@@ -112,13 +113,13 @@ public:
   void switch_filter(const Eigen::VectorXd &filter_numerator,
                      const Eigen::VectorXd &filter_denominator);
 
-protected:
-public: /* --- ENTITY INHERITANCE --- */
+ protected:
+ public: /* --- ENTITY INHERITANCE --- */
   virtual void display(std::ostream &os) const;
 
-}; // class FilterDifferentiator
+};  // class FilterDifferentiator
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // #ifndef __sot_torque_control_FilterDifferentiator_H__
+#endif  // #ifndef __sot_torque_control_FilterDifferentiator_H__
diff --git a/include/sot/core/fir-filter-impl.hh b/include/sot/core/fir-filter-impl.hh
index db2b84bc..0815423e 100644
--- a/include/sot/core/fir-filter-impl.hh
+++ b/include/sot/core/fir-filter-impl.hh
@@ -27,16 +27,16 @@
 #endif
 
 #ifdef WIN32
-#define DECLARE_SPECIFICATION(className, sotSigType, sotCoefType)              \
-  class FIL_FILTER_EXPORT className                                            \
-      : public FIRFilter<sotSigType, sotCoefType> {                            \
-  public:                                                                      \
-    className(const std::string &name);                                        \
+#define DECLARE_SPECIFICATION(className, sotSigType, sotCoefType) \
+  class FIL_FILTER_EXPORT className                               \
+      : public FIRFilter<sotSigType, sotCoefType> {               \
+   public:                                                        \
+    className(const std::string &name);                           \
   };
 #else
-#define DECLARE_SPECIFICATION(className, sotSigType, sotCoefType)              \
+#define DECLARE_SPECIFICATION(className, sotSigType, sotCoefType) \
   typedef FIRFilter<sotSigType, sotCoefType> className;
-#endif // WIN32
+#endif  // WIN32
 
 namespace dynamicgraph {
 namespace sot {
@@ -45,6 +45,6 @@ DECLARE_SPECIFICATION(FIRFilterDoubleDouble, double, double)
 DECLARE_SPECIFICATION(FIRFilterVectorDouble, Vector, double)
 DECLARE_SPECIFICATION(FIRFilterVectorMatrix, Vector, Matrix)
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 #endif
diff --git a/include/sot/core/fir-filter.hh b/include/sot/core/fir-filter.hh
index 4dc9db35..26a48a2e 100644
--- a/include/sot/core/fir-filter.hh
+++ b/include/sot/core/fir-filter.hh
@@ -10,17 +10,16 @@
 #ifndef __SOT_FIRFILTER_HH__
 #define __SOT_FIRFILTER_HH__
 
-#include <cassert>
-
-#include <algorithm>
-#include <iterator>
-#include <vector>
-
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/command-getter.h>
 #include <dynamic-graph/command-setter.h>
 #include <dynamic-graph/entity.h>
 
+#include <algorithm>
+#include <cassert>
+#include <iterator>
+#include <vector>
+
 namespace dynamicgraph {
 namespace sot {
 
@@ -29,8 +28,9 @@ namespace detail {
 // As a workaround, only the part of circular_buffer's interface used
 // here is implemented.
 // Ugly, fatty piece of code.
-template <class T> class circular_buffer {
-public:
+template <class T>
+class circular_buffer {
+ public:
   circular_buffer() : buf(1), start(0), numel(0) {}
   void push_front(const T &data) {
     if (start) {
@@ -61,37 +61,41 @@ public:
   }
   size_t size() const { return numel; }
 
-private:
+ private:
   std::vector<T> buf;
   size_t start;
   size_t numel;
-}; // class circular_buffer
-} // namespace detail
+};  // class circular_buffer
+}  // namespace detail
 
-template <class sigT, class coefT> class FIRFilter;
+template <class sigT, class coefT>
+class FIRFilter;
 
 namespace command {
 using ::dynamicgraph::command::Command;
 using ::dynamicgraph::command::Value;
 
-template <class sigT, class coefT> class SetElement : public Command {
-public:
+template <class sigT, class coefT>
+class SetElement : public Command {
+ public:
   SetElement(FIRFilter<sigT, coefT> &entity, const std::string &docstring);
   Value doExecute();
-}; // class SetElement
+};  // class SetElement
 
-template <class sigT, class coefT> class GetElement : public Command {
-public:
+template <class sigT, class coefT>
+class GetElement : public Command {
+ public:
   GetElement(FIRFilter<sigT, coefT> &entity, const std::string &docstring);
   Value doExecute();
-}; // class SetElement
-} // namespace command
+};  // class SetElement
+}  // namespace command
 
 using ::dynamicgraph::command::Getter;
 using ::dynamicgraph::command::Setter;
 
-template <class sigT, class coefT> class FIRFilter : public Entity {
-public:
+template <class sigT, class coefT>
+class FIRFilter : public Entity {
+ public:
   virtual const std::string &getClassName() const {
     return Entity::getClassName();
   }
@@ -114,38 +118,43 @@ public:
            "    -  s is the input signal.\n";
   }
 
-public:
+ public:
   FIRFilter(const std::string &name)
-      : Entity(name), SIN(NULL, "sotFIRFilter(" + name + ")::input(T)::sin"),
+      : Entity(name),
+        SIN(NULL, "sotFIRFilter(" + name + ")::input(T)::sin"),
         SOUT(boost::bind(&FIRFilter::compute, this, _1, _2), SIN,
              "sotFIRFilter(" + name + ")::output(T)::sout") {
     signalRegistration(SIN << SOUT);
-    std::string docstring = "  Set element at rank in array of coefficients\n"
-                            "\n"
-                            "    Input:\n"
-                            "      - positive int: rank\n"
-                            "      - element\n";
+    std::string docstring =
+        "  Set element at rank in array of coefficients\n"
+        "\n"
+        "    Input:\n"
+        "      - positive int: rank\n"
+        "      - element\n";
     addCommand("setElement",
                new command::SetElement<sigT, coefT>(*this, docstring));
-    docstring = "  Get element at rank in array of coefficients\n"
-                "\n"
-                "    Input:\n"
-                "      - positive int: rank\n"
-                "    Return:\n"
-                "      - element\n";
+    docstring =
+        "  Get element at rank in array of coefficients\n"
+        "\n"
+        "    Input:\n"
+        "      - positive int: rank\n"
+        "    Return:\n"
+        "      - element\n";
     addCommand("getElement",
                new command::GetElement<sigT, coefT>(*this, docstring));
-    docstring = "  Set number of coefficients\n"
-                "\n"
-                "    Input:\n"
-                "      - positive int: size\n";
+    docstring =
+        "  Set number of coefficients\n"
+        "\n"
+        "    Input:\n"
+        "      - positive int: size\n";
     addCommand("setSize", new Setter<FIRFilter, unsigned>(
                               *this, &FIRFilter::resizeBuffer, docstring));
 
-    docstring = "  Get Number of coefficients\n"
-                "\n"
-                "    Return:\n"
-                "      - positive int: size\n";
+    docstring =
+        "  Get Number of coefficients\n"
+        "\n"
+        "    Return:\n"
+        "      - positive int: size\n";
     addCommand("getSize", new Getter<FIRFilter, unsigned>(
                               *this, &FIRFilter::getBufferSize, docstring));
   }
@@ -183,14 +192,14 @@ public:
 
   static void reset_signal(sigT & /*res*/, const sigT & /*sample*/) {}
 
-public:
+ public:
   SignalPtr<sigT, int> SIN;
   SignalTimeDependent<sigT, int> SOUT;
 
-private:
+ private:
   std::vector<coefT> coefs;
   detail::circular_buffer<sigT> data;
-}; // class FIRFilter
+};  // class FIRFilter
 
 namespace command {
 using ::dynamicgraph::command::Command;
@@ -205,7 +214,8 @@ SetElement<sigT, coefT>::SetElement(FIRFilter<sigT, coefT> &entity,
           boost::assign::list_of(Value::UNSIGNED)(ValueHelper<coefT>::TypeID),
           docstring) {}
 
-template <class sigT, class coefT> Value SetElement<sigT, coefT>::doExecute() {
+template <class sigT, class coefT>
+Value SetElement<sigT, coefT>::doExecute() {
   FIRFilter<sigT, coefT> &entity =
       static_cast<FIRFilter<sigT, coefT> &>(owner());
   std::vector<Value> values = getParameterValues();
@@ -220,16 +230,17 @@ GetElement<sigT, coefT>::GetElement(FIRFilter<sigT, coefT> &entity,
                                     const std::string &docstring)
     : Command(entity, boost::assign::list_of(Value::UNSIGNED), docstring) {}
 
-template <class sigT, class coefT> Value GetElement<sigT, coefT>::doExecute() {
+template <class sigT, class coefT>
+Value GetElement<sigT, coefT>::doExecute() {
   FIRFilter<sigT, coefT> &entity =
       static_cast<FIRFilter<sigT, coefT> &>(owner());
   std::vector<Value> values = getParameterValues();
   unsigned int rank = values[0].value();
   return Value(entity.getElement(rank));
 }
-} // namespace command
+}  // namespace command
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 #endif
diff --git a/include/sot/core/flags.hh b/include/sot/core/flags.hh
index 2874f405..6dcb1134 100644
--- a/include/sot/core/flags.hh
+++ b/include/sot/core/flags.hh
@@ -19,9 +19,10 @@
 #include <vector>
 
 /* SOT */
-#include "sot/core/api.hh"
 #include <dynamic-graph/signal-caster.h>
 
+#include "sot/core/api.hh"
+
 /* --------------------------------------------------------------------- */
 /* --- CLASS ----------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
@@ -30,11 +31,11 @@ namespace dynamicgraph {
 namespace sot {
 
 class SOT_CORE_EXPORT Flags {
-protected:
+ protected:
   std::vector<bool> flags;
   bool outOfRangeFlag;
 
-public:
+ public:
   Flags(const bool &b = false);
   Flags(const char *flags);
   Flags(const std::vector<bool> &flags);
@@ -58,10 +59,10 @@ public:
   void set(const unsigned int &i);
 };
 
-} // namespace sot
+}  // namespace sot
 
 template <>
 struct signal_io<sot::Flags> : signal_io_unimplemented<sot::Flags> {};
-} // namespace dynamicgraph
+}  // namespace dynamicgraph
 
 #endif /* #ifndef __SOT_FLAGS_H */
diff --git a/include/sot/core/fwd.hh b/include/sot/core/fwd.hh
index 65c5dfd8..4d50956b 100644
--- a/include/sot/core/fwd.hh
+++ b/include/sot/core/fwd.hh
@@ -17,7 +17,7 @@ namespace sot {
 class Device;
 class AbstractSotExternalInterface;
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // SOT_CORE_FWD_HH
+#endif  // SOT_CORE_FWD_HH
diff --git a/include/sot/core/gain-adaptive.hh b/include/sot/core/gain-adaptive.hh
index 7482962d..4abf52d7 100644
--- a/include/sot/core/gain-adaptive.hh
+++ b/include/sot/core/gain-adaptive.hh
@@ -51,32 +51,31 @@ namespace sot {
  * - \f$ c = 0.1 \f$.
  */
 class SOTGAINADAPTATIVE_EXPORT GainAdaptive : public dynamicgraph::Entity {
-
-public: /* --- CONSTANTS --- */
+ public: /* --- CONSTANTS --- */
   /* Default values. */
-  static const double ZERO_DEFAULT;  // = 0.1
-  static const double INFTY_DEFAULT; // = 0.1
-  static const double TAN_DEFAULT;   // = 1.
+  static const double ZERO_DEFAULT;   // = 0.1
+  static const double INFTY_DEFAULT;  // = 0.1
+  static const double TAN_DEFAULT;    // = 1.
 
-public: /* --- ENTITY INHERITANCE --- */
+ public: /* --- ENTITY INHERITANCE --- */
   static const std::string CLASS_NAME;
   virtual void display(std::ostream &os) const;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-protected:
+ protected:
   /* Parameters of the adaptative-gain function:
    * lambda (x) = a * exp (-b*x) + c. */
   double coeff_a;
   double coeff_b;
   double coeff_c;
 
-public: /* --- CONSTRUCTORS ---- */
+ public: /* --- CONSTRUCTORS ---- */
   GainAdaptive(const std::string &name);
   GainAdaptive(const std::string &name, const double &lambda);
   GainAdaptive(const std::string &name, const double &valueAt0,
                const double &valueAtInfty, const double &tanAt0);
 
-public: /* --- INIT --- */
+ public: /* --- INIT --- */
   inline void init(void) { init(ZERO_DEFAULT, INFTY_DEFAULT, TAN_DEFAULT); }
   inline void init(const double &lambda) { init(lambda, lambda, 1.); }
   void init(const double &valueAt0, const double &valueAtInfty,
@@ -116,18 +115,18 @@ public: /* --- INIT --- */
                             const double &percentage);
   void forceConstant(void);
 
-public: /* --- SIGNALS --- */
+ public: /* --- SIGNALS --- */
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> errorSIN;
   dynamicgraph::SignalTimeDependent<double, int> gainSOUT;
 
-protected:
+ protected:
   double &computeGain(double &res, int t);
 
-private:
+ private:
   void addCommands();
 };
 
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOT_GAIN_ADAPTATIVE_HH__
+#endif  // #ifndef __SOT_GAIN_ADAPTATIVE_HH__
diff --git a/include/sot/core/gain-hyperbolic.hh b/include/sot/core/gain-hyperbolic.hh
index abba25c4..245d70e9 100644
--- a/include/sot/core/gain-hyperbolic.hh
+++ b/include/sot/core/gain-hyperbolic.hh
@@ -51,19 +51,18 @@ namespace sot {
  * - \f$ d = 0   \f$.
  */
 class SOTGAINHYPERBOLIC_EXPORT GainHyperbolic : public dynamicgraph::Entity {
-
-public: /* --- CONSTANTS --- */
+ public: /* --- CONSTANTS --- */
   /* Default values. */
-  static const double ZERO_DEFAULT;  // = 0.1
-  static const double INFTY_DEFAULT; // = 0.1
-  static const double TAN_DEFAULT;   // = 1.
+  static const double ZERO_DEFAULT;   // = 0.1
+  static const double INFTY_DEFAULT;  // = 0.1
+  static const double TAN_DEFAULT;    // = 1.
 
-public: /* --- ENTITY INHERITANCE --- */
+ public: /* --- ENTITY INHERITANCE --- */
   static const std::string CLASS_NAME;
   virtual void display(std::ostream &os) const;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-protected:
+ protected:
   /* Parameters of the hyperbolic-gain function:
    * lambda (x) = a * exp (-b*x) + c. */
   double coeff_a;
@@ -71,14 +70,14 @@ protected:
   double coeff_c;
   double coeff_d;
 
-public: /* --- CONSTRUCTORS ---- */
+ public: /* --- CONSTRUCTORS ---- */
   GainHyperbolic(const std::string &name);
   GainHyperbolic(const std::string &name, const double &lambda);
   GainHyperbolic(const std::string &name, const double &valueAt0,
                  const double &valueAtInfty, const double &tanAt0,
                  const double &decal0);
 
-public: /* --- INIT --- */
+ public: /* --- INIT --- */
   inline void init(void) { init(ZERO_DEFAULT, INFTY_DEFAULT, TAN_DEFAULT, 0); }
   inline void init(const double &lambda) { init(lambda, lambda, 1., 0); }
   /** Set the coefficients.
@@ -91,15 +90,15 @@ public: /* --- INIT --- */
             const double &tanAt0, const double &decal0);
   void forceConstant(void);
 
-public: /* --- SIGNALS --- */
+ public: /* --- SIGNALS --- */
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> errorSIN;
   dynamicgraph::SignalTimeDependent<double, int> gainSOUT;
 
-protected:
+ protected:
   double &computeGain(double &res, int t);
 };
 
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOT_GAIN_HYPERBOLIC_HH__
+#endif  // #ifndef __SOT_GAIN_HYPERBOLIC_HH__
diff --git a/include/sot/core/gradient-ascent.hh b/include/sot/core/gradient-ascent.hh
index 40df988a..9d57ffac 100644
--- a/include/sot/core/gradient-ascent.hh
+++ b/include/sot/core/gradient-ascent.hh
@@ -16,6 +16,7 @@
 #include <dynamic-graph/entity.h>
 #include <dynamic-graph/signal-ptr.h>
 #include <dynamic-graph/signal-time-dependent.h>
+
 #include <sot/core/config.hh>
 
 namespace dynamicgraph {
@@ -32,17 +33,17 @@ using dynamicgraph::SignalTimeDependent;
 class SOT_CORE_DLLAPI GradientAscent : public Entity {
   DYNAMIC_GRAPH_ENTITY_DECL();
 
-public:
+ public:
   SignalPtr<dynamicgraph::Vector, int> gradientSIN;
   SignalPtr<double, int> learningRateSIN;
   SignalTimeDependent<int, int> refresherSINTERN;
   SignalTimeDependent<dynamicgraph::Vector, int> valueSOUT;
 
-public:
+ public:
   GradientAscent(const std::string &n);
   virtual ~GradientAscent(void);
 
-protected:
+ protected:
   dynamicgraph::Vector &update(dynamicgraph::Vector &res, const int &inTime);
 
   dynamicgraph::Vector value;
diff --git a/include/sot/core/gripper-control.hh b/include/sot/core/gripper-control.hh
index 75fef519..cbfc9587 100644
--- a/include/sot/core/gripper-control.hh
+++ b/include/sot/core/gripper-control.hh
@@ -20,6 +20,7 @@
 /* SOT */
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/flags.hh>
 
 /* STD */
@@ -53,13 +54,13 @@ kept
  *
  */
 class SOTGRIPPERCONTROL_EXPORT GripperControl {
-protected:
+ protected:
   double offset;
   static const double OFFSET_DEFAULT;
   //! \brief The multiplication
   dynamicgraph::Vector factor;
 
-public:
+ public:
   GripperControl(void);
 
   //! \brief Computes the
@@ -70,12 +71,12 @@ public:
                         const dynamicgraph::Vector &currentNormVel);
 
   //! \brief
-  dynamicgraph::Vector &
-  computeDesiredPosition(const dynamicgraph::Vector &currentPos,
-                         const dynamicgraph::Vector &desiredPos,
-                         const dynamicgraph::Vector &torques,
-                         const dynamicgraph::Vector &torqueLimits,
-                         dynamicgraph::Vector &referencePos);
+  dynamicgraph::Vector &computeDesiredPosition(
+      const dynamicgraph::Vector &currentPos,
+      const dynamicgraph::Vector &desiredPos,
+      const dynamicgraph::Vector &torques,
+      const dynamicgraph::Vector &torqueLimits,
+      dynamicgraph::Vector &referencePos);
 
   /*! \brief select only some of the values of the vector fullsize,
    *   based on the Flags vector.
@@ -95,17 +96,17 @@ class SOTGRIPPERCONTROL_EXPORT GripperControlPlugin
       public GripperControl {
   DYNAMIC_GRAPH_ENTITY_DECL();
 
-public:
+ public:
   bool calibrationStarted;
 
-public: /* --- CONSTRUCTION --- */
+ public: /* --- CONSTRUCTION --- */
   GripperControlPlugin(const std::string &name);
   virtual ~GripperControlPlugin(void);
 
   /* --- DOCUMENTATION --- */
   virtual std::string getDocString() const;
 
-public: /* --- SIGNAL --- */
+ public: /* --- SIGNAL --- */
   /* --- INPUTS --- */
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> positionSIN;
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> positionDesSIN;
@@ -127,7 +128,7 @@ public: /* --- SIGNAL --- */
   dynamicgraph::SignalTimeDependent<dynamicgraph::Vector, int>
       desiredPositionSOUT;
 
-public: /* --- COMMANDLINE --- */
+ public: /* --- COMMANDLINE --- */
   void initCommands();
 
   void setOffset(const double &value);
@@ -136,4 +137,4 @@ public: /* --- COMMANDLINE --- */
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOT_SOTGRIPPERCONTROL_H__
+#endif  // #ifndef __SOT_SOTGRIPPERCONTROL_H__
diff --git a/include/sot/core/integrator-abstract-impl.hh b/include/sot/core/integrator-abstract-impl.hh
index 9054fecb..7bd8cdcc 100644
--- a/include/sot/core/integrator-abstract-impl.hh
+++ b/include/sot/core/integrator-abstract-impl.hh
@@ -32,14 +32,14 @@
 /* --------------------------------------------------------------------- */
 
 #ifdef WIN32
-#define DECLARE_SPECIFICATION(className, sotSigType, sotCoefType)              \
-  class INTEGRATOR_ABSTRACT_EXPORT className                                   \
-      : public IntegratorAbstract<sotSigType, sotCoefType> {                   \
-  public:                                                                      \
-    className(const std::string &name);                                        \
+#define DECLARE_SPECIFICATION(className, sotSigType, sotCoefType) \
+  class INTEGRATOR_ABSTRACT_EXPORT className                      \
+      : public IntegratorAbstract<sotSigType, sotCoefType> {      \
+   public:                                                        \
+    className(const std::string &name);                           \
   };
 #else
-#define DECLARE_SPECIFICATION(className, sotSigType, sotCoefType)              \
+#define DECLARE_SPECIFICATION(className, sotSigType, sotCoefType) \
   typedef IntegratorAbstract<sotSigType, sotCoefType> className;
 #endif
 
@@ -48,6 +48,6 @@ namespace sot {
 DECLARE_SPECIFICATION(IntegratorAbstractDouble, double, double)
 DECLARE_SPECIFICATION(IntegratorAbstractVector, dynamicgraph::Vector,
                       dynamicgraph::Matrix)
-} // namespace sot
-} // namespace dynamicgraph
-#endif // #ifndef  __SOT_MAILBOX_HH
+}  // namespace sot
+}  // namespace dynamicgraph
+#endif  // #ifndef  __SOT_MAILBOX_HH
diff --git a/include/sot/core/integrator-abstract.hh b/include/sot/core/integrator-abstract.hh
index 332eacf7..840797ba 100644
--- a/include/sot/core/integrator-abstract.hh
+++ b/include/sot/core/integrator-abstract.hh
@@ -22,6 +22,7 @@
 #include <dynamic-graph/command-bind.h>
 #include <dynamic-graph/entity.h>
 #include <dynamic-graph/pool.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/flags.hh>
 
@@ -43,7 +44,7 @@ namespace sot {
  */
 template <class sigT, class coefT>
 class IntegratorAbstract : public dynamicgraph::Entity {
-public:
+ public:
   IntegratorAbstract(const std::string &name)
       : dynamicgraph::Entity(name),
         SIN(NULL, "sotIntegratorAbstract(" + name + ")::input(vector)::sin"),
@@ -82,7 +83,7 @@ public:
 
   virtual sigT &integrate(sigT &res, int time) = 0;
 
-public:
+ public:
   void pushNumCoef(const coefT &numCoef) { numerator.push_back(numCoef); }
   void pushDenomCoef(const coefT &denomCoef) {
     denominator.push_back(denomCoef);
@@ -96,7 +97,7 @@ public:
   const std::vector<coefT> &denomCoeffs() const { return denominator; }
   void denomCoeffs(const std::vector<coefT> &coeffs) { denominator = coeffs; }
 
-public:
+ public:
   dynamicgraph::SignalPtr<sigT, int> SIN;
 
   dynamicgraph::SignalTimeDependent<sigT, int> SOUT;
@@ -115,7 +116,7 @@ public:
       os << " + " << denominator[i] << " s^" << i;
   }
 
-protected:
+ protected:
   std::vector<coefT> numerator;
   std::vector<coefT> denominator;
 };
diff --git a/include/sot/core/integrator-euler-impl.hh b/include/sot/core/integrator-euler-impl.hh
index ae22a2d0..943196a7 100644
--- a/include/sot/core/integrator-euler-impl.hh
+++ b/include/sot/core/integrator-euler-impl.hh
@@ -32,24 +32,24 @@
 #endif
 
 #ifdef WIN32
-#define DECLARE_SPECIFICATION(className, sotSigType, sotCoefType)              \
-  class INTEGRATOR_EULER_EXPORT className                                      \
-      : public IntegratorEuler<sotSigType, sotCoefType> {                      \
-  public:                                                                      \
-    std::string getTypeName(void);                                             \
-    className(const std::string &name);                                        \
+#define DECLARE_SPECIFICATION(className, sotSigType, sotCoefType) \
+  class INTEGRATOR_EULER_EXPORT className                         \
+      : public IntegratorEuler<sotSigType, sotCoefType> {         \
+   public:                                                        \
+    std::string getTypeName(void);                                \
+    className(const std::string &name);                           \
   };
 #else
-#define DECLARE_SPECIFICATION(className, sotSigType, sotCoefType)              \
+#define DECLARE_SPECIFICATION(className, sotSigType, sotCoefType) \
   typedef IntegratorEuler<sotSigType, sotCoefType> className;
-#endif // WIN32
+#endif  // WIN32
 
 namespace dynamicgraph {
 namespace sot {
 DECLARE_SPECIFICATION(IntegratorEulerDoubleDouble, double, double)
 DECLARE_SPECIFICATION(IntegratorEulerVectorDouble, Vector, double)
 DECLARE_SPECIFICATION(IntegratorEulerVectorMatrix, Vector, Matrix)
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 #endif
diff --git a/include/sot/core/integrator-euler.hh b/include/sot/core/integrator-euler.hh
index d7b04d06..92b761ba 100644
--- a/include/sot/core/integrator-euler.hh
+++ b/include/sot/core/integrator-euler.hh
@@ -17,6 +17,7 @@
 /* SOT */
 #include <dynamic-graph/command-getter.h>
 #include <dynamic-graph/command-setter.h>
+
 #include <sot/core/integrator-abstract.hh>
 
 /* --------------------------------------------------------------------- */
@@ -27,14 +28,15 @@ namespace dynamicgraph {
 namespace sot {
 
 namespace internal {
-template <class coefT> bool integratorEulerCoeffIsIdentity(const coefT c) {
+template <class coefT>
+bool integratorEulerCoeffIsIdentity(const coefT c) {
   return c == 1;
 }
 
 bool integratorEulerCoeffIsIdentity(const Vector c) { return c.isOnes(); }
 
 bool integratorEulerCoeffIsIdentity(const Matrix c) { return c.isIdentity(); }
-} // namespace internal
+}  // namespace internal
 
 /*!
  * \class IntegratorEuler
@@ -47,19 +49,18 @@ bool integratorEulerCoeffIsIdentity(const Matrix c) { return c.isIdentity(); }
  */
 template <class sigT, class coefT>
 class IntegratorEuler : public IntegratorAbstract<sigT, coefT> {
-
-public:
+ public:
   virtual const std::string &getClassName(void) const;
   static std::string getTypeName(void) { return "Unknown"; }
   static const std::string CLASS_NAME;
 
-public:
+ public:
   using IntegratorAbstract<sigT, coefT>::SIN;
   using IntegratorAbstract<sigT, coefT>::SOUT;
   using IntegratorAbstract<sigT, coefT>::numerator;
   using IntegratorAbstract<sigT, coefT>::denominator;
 
-public:
+ public:
   IntegratorEuler(const std::string &name)
       : IntegratorAbstract<sigT, coefT>(name),
         derivativeSOUT(boost::bind(&IntegratorEuler<sigT, coefT>::derivative,
@@ -92,7 +93,7 @@ public:
 
   virtual ~IntegratorEuler(void) {}
 
-protected:
+ protected:
   std::vector<sigT> inputMemory;
   std::vector<sigT> outputMemory;
 
@@ -101,7 +102,7 @@ protected:
   double dt;
   double invdt;
 
-public:
+ public:
   sigT &integrate(sigT &res, int time) {
     sotDEBUG(15) << "# In {" << std::endl;
 
diff --git a/include/sot/core/joint-limitator.hh b/include/sot/core/joint-limitator.hh
index efb1e914..3931689c 100644
--- a/include/sot/core/joint-limitator.hh
+++ b/include/sot/core/joint-limitator.hh
@@ -15,6 +15,7 @@
 // SOT
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/exception-task.hh>
 
 #if defined(WIN32)
@@ -37,7 +38,7 @@ namespace sot {
 class SOTJOINTLIMITATOR_EXPORT JointLimitator : public dynamicgraph::Entity {
   DYNAMIC_GRAPH_ENTITY_DECL();
 
-public:
+ public:
   JointLimitator(const std::string &name);
   virtual ~JointLimitator() {}
 
@@ -58,7 +59,7 @@ public:
   dynamicgraph::SignalTimeDependent<dynamicgraph::Vector, int> widthJlSINTERN;
   /// \}
 };
-} // end of namespace sot.
-} // namespace dynamicgraph
+}  // end of namespace sot.
+}  // namespace dynamicgraph
 
-#endif //! SOT_FEATURE_JOINTLIMITS_HH
+#endif  //! SOT_FEATURE_JOINTLIMITS_HH
diff --git a/include/sot/core/joint-trajectory-entity.hh b/include/sot/core/joint-trajectory-entity.hh
index d674e132..dc8854a2 100644
--- a/include/sot/core/joint-trajectory-entity.hh
+++ b/include/sot/core/joint-trajectory-entity.hh
@@ -9,9 +9,8 @@
 #ifndef SOT_JOINT_TRAJECTORY_ENTITY_HH
 #define SOT_JOINT_TRAJECTORY_ENTITY_HH
 
-#include <list>
-
 #include <deque>
+#include <list>
 
 // Maal
 #include <dynamic-graph/linear-algebra.h>
@@ -19,9 +18,9 @@
 // SOT
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/matrix-geometry.hh>
 #include <sot/core/trajectory.hh>
-
 #include <sstream>
 // API
 
@@ -47,7 +46,7 @@ namespace sot {
 
 class SOTJOINT_TRAJECTORY_ENTITY_EXPORT SotJointTrajectoryEntity
     : public dynamicgraph::Entity {
-public:
+ public:
   DYNAMIC_GRAPH_ENTITY_DECL();
 
   /// \brief Constructor
@@ -74,8 +73,8 @@ public:
   unsigned int &getSeqId(unsigned int &seqid, const int &time);
 
   /// \brief Convert a xyztheta vector into an homogeneous matrix
-  sot::MatrixHomogeneous
-  XYZThetaToMatrixHomogeneous(const dynamicgraph::Vector &xyztheta);
+  sot::MatrixHomogeneous XYZThetaToMatrixHomogeneous(
+      const dynamicgraph::Vector &xyztheta);
 
   /// \brief Perform one update of the signals.
   int &OneStepOfUpdate(int &dummy, const int &time);
@@ -91,7 +90,7 @@ public:
   }
   /// @}
 
-public:
+ public:
   typedef int Dummy;
 
   /// @name Signals
@@ -121,7 +120,7 @@ public:
   dynamicgraph::SignalPtr<Trajectory, int> trajectorySIN;
   ///@}
 
-protected:
+ protected:
   /// \brief Index on the point along the trajectory.
   std::deque<sot::Trajectory>::size_type index_;
 
@@ -162,4 +161,4 @@ protected:
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // SOT_JOINT_TRAJECTORY_ENTITY_HH
+#endif  // SOT_JOINT_TRAJECTORY_ENTITY_HH
diff --git a/include/sot/core/kalman.hh b/include/sot/core/kalman.hh
index 498d7834..1e09338a 100644
--- a/include/sot/core/kalman.hh
+++ b/include/sot/core/kalman.hh
@@ -16,11 +16,12 @@
 /* --- INCLUDE -------------------------------------------------------------- */
 /* -------------------------------------------------------------------------- */
 
-#include <Eigen/LU>
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
 #include <dynamic-graph/linear-algebra.h>
 
+#include <Eigen/LU>
+
 /* -------------------------------------------------------------------------- */
 /* --- API ------------------------------------------------------------------ */
 /* -------------------------------------------------------------------------- */
@@ -43,31 +44,31 @@ namespace dynamicgraph {
 namespace sot {
 
 class SOT_KALMAN_EXPORT Kalman : public Entity {
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-protected:
+ protected:
   unsigned int size_state;
   unsigned int size_measure;
   double dt;
 
-public:
-  SignalPtr<Vector, int> measureSIN;         // y
-  SignalPtr<Matrix, int> modelTransitionSIN; // F
-  SignalPtr<Matrix, int> modelMeasureSIN;    // H
-  SignalPtr<Matrix, int> noiseTransitionSIN; // Q
-  SignalPtr<Matrix, int> noiseMeasureSIN;    // R
+ public:
+  SignalPtr<Vector, int> measureSIN;          // y
+  SignalPtr<Matrix, int> modelTransitionSIN;  // F
+  SignalPtr<Matrix, int> modelMeasureSIN;     // H
+  SignalPtr<Matrix, int> noiseTransitionSIN;  // Q
+  SignalPtr<Matrix, int> noiseMeasureSIN;     // R
 
-  SignalPtr<Vector, int> statePredictedSIN;            // x_{k|k-1}
-  SignalPtr<Vector, int> observationPredictedSIN;      // y_pred = h (x_{k|k-1})
-  SignalTimeDependent<Matrix, int> varianceUpdateSOUT; // P
-  SignalTimeDependent<Vector, int> stateUpdateSOUT;    // X_est
+  SignalPtr<Vector, int> statePredictedSIN;        // x_{k|k-1}
+  SignalPtr<Vector, int> observationPredictedSIN;  // y_pred = h (x_{k|k-1})
+  SignalTimeDependent<Matrix, int> varianceUpdateSOUT;  // P
+  SignalTimeDependent<Vector, int> stateUpdateSOUT;     // X_est
 
-  SignalTimeDependent<Matrix, int> gainSINTERN;       // K
-  SignalTimeDependent<Matrix, int> innovationSINTERN; // S
+  SignalTimeDependent<Matrix, int> gainSINTERN;        // K
+  SignalTimeDependent<Matrix, int> innovationSINTERN;  // S
 
-public:
+ public:
   virtual std::string getDocString() const {
     return "Implementation of extended Kalman filter     \n"
            "\n"
@@ -138,7 +139,7 @@ public:
            "                                                k|k\n";
   }
 
-protected:
+ protected:
   Matrix &computeVarianceUpdate(Matrix &P_k_k, const int &time);
   Vector &computeStateUpdate(Vector &x_est, const int &time);
 
@@ -181,14 +182,14 @@ protected:
   // Kalman Gain
   Matrix K_;
 
-public:
+ public:
   Kalman(const std::string &name);
   /* --- Entity --- */
   void display(std::ostream &os) const;
 };
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 /*!
   \file Kalman.h
diff --git a/include/sot/core/latch.hh b/include/sot/core/latch.hh
index fc864a6c..b1097929 100644
--- a/include/sot/core/latch.hh
+++ b/include/sot/core/latch.hh
@@ -14,6 +14,7 @@
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/command-bind.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/pool.hh>
 
 /* STD */
@@ -30,14 +31,13 @@ using dynamicgraph::command::docCommandVoid0;
 using dynamicgraph::command::makeCommandVoid0;
 
 class Latch : public Entity {
-
-public: /* --- SIGNAL --- */
+ public: /* --- SIGNAL --- */
   DYNAMIC_GRAPH_ENTITY_DECL();
   Signal<bool, int> outSOUT;
   Signal<bool, int> turnOnSOUT;
   Signal<bool, int> turnOffSOUT;
 
-protected:
+ protected:
   bool signalOutput;
   void turnOn() { signalOutput = true; }
   bool &turnOnLatch(bool &res, int) {
@@ -56,9 +56,10 @@ protected:
     return res;
   }
 
-public:
+ public:
   Latch(const std::string &name)
-      : Entity(name), outSOUT("Latch(" + name + ")::output(bool)::out"),
+      : Entity(name),
+        outSOUT("Latch(" + name + ")::output(bool)::out"),
         turnOnSOUT("Latch(" + name + ")::output(bool)::turnOnSout"),
         turnOffSOUT("Latch(" + name + ")::output(bool)::turnOffSout") {
     outSOUT.setFunction(boost::bind(&Latch::latchOutput, this, _1, _2));
@@ -79,4 +80,4 @@ public:
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOT_LATCH_H__
+#endif  // #ifndef __SOT_LATCH_H__
diff --git a/include/sot/core/macros-signal.hh b/include/sot/core/macros-signal.hh
index 3b2e182f..164d021b 100644
--- a/include/sot/core/macros-signal.hh
+++ b/include/sot/core/macros-signal.hh
@@ -11,111 +11,111 @@
 /* --- GENERIC MACROS ------------------------------------------------------- */
 /* --- GENERIC MACROS ------------------------------------------------------- */
 
-#define SOT_CALL_SIG(sotName, sotType)                                         \
+#define SOT_CALL_SIG(sotName, sotType) \
   boost::bind(&Signal<sotType, int>::access, &sotName, _2)
 
 /* --- STATIC MACROS -------------------------------------------------------- */
 /* --- STATIC MACROS -------------------------------------------------------- */
 /* --- STATIC MACROS -------------------------------------------------------- */
 
-#define SOT_INIT_SIGNAL_1(sotFunction, sotArg1, sotArg1Type)                   \
+#define SOT_INIT_SIGNAL_1(sotFunction, sotArg1, sotArg1Type) \
   boost::bind(&sotFunction, SOT_CALL_SIG(sotArg1, sotArg1Type), _1), sotArg1
 
-#define SOT_INIT_SIGNAL_2(sotFunction, sotArg1, sotArg1Type, sotArg2,          \
-                          sotArg2Type)                                         \
-  boost::bind(&sotFunction, SOT_CALL_SIG(sotArg1, sotArg1Type),                \
-              SOT_CALL_SIG(sotArg2, sotArg2Type), _1),                         \
+#define SOT_INIT_SIGNAL_2(sotFunction, sotArg1, sotArg1Type, sotArg2, \
+                          sotArg2Type)                                \
+  boost::bind(&sotFunction, SOT_CALL_SIG(sotArg1, sotArg1Type),       \
+              SOT_CALL_SIG(sotArg2, sotArg2Type), _1),                \
       sotArg1 << sotArg2
-#define SOT_INIT_SIGNAL_3(sotFunction, sotArg1, sotArg1Type, sotArg2,          \
-                          sotArg2Type, sotArg3, sotArg3Type)                   \
-  boost::bind(&sotFunction, SOT_CALL_SIG(sotArg1, sotArg1Type),                \
-              SOT_CALL_SIG(sotArg2, sotArg2Type),                              \
-              SOT_CALL_SIG(sotArg3, sotArg3Type), _1),                         \
+#define SOT_INIT_SIGNAL_3(sotFunction, sotArg1, sotArg1Type, sotArg2, \
+                          sotArg2Type, sotArg3, sotArg3Type)          \
+  boost::bind(&sotFunction, SOT_CALL_SIG(sotArg1, sotArg1Type),       \
+              SOT_CALL_SIG(sotArg2, sotArg2Type),                     \
+              SOT_CALL_SIG(sotArg3, sotArg3Type), _1),                \
       sotArg1 << sotArg2 << sotArg3
 
-#define SOT_INIT_SIGNAL_4(sotFunction, sotArg1, sotArg1Type, sotArg2,          \
-                          sotArg2Type, sotArg3, sotArg3Type, sotArg4,          \
-                          sotArg4Type)                                         \
-  boost::bind(&sotFunction, SOT_CALL_SIG(sotArg1, sotArg1Type),                \
-              SOT_CALL_SIG(sotArg2, sotArg2Type),                              \
-              SOT_CALL_SIG(sotArg3, sotArg3Type),                              \
-              SOT_CALL_SIG(sotArg4, sotArg4Type), _1),                         \
+#define SOT_INIT_SIGNAL_4(sotFunction, sotArg1, sotArg1Type, sotArg2, \
+                          sotArg2Type, sotArg3, sotArg3Type, sotArg4, \
+                          sotArg4Type)                                \
+  boost::bind(&sotFunction, SOT_CALL_SIG(sotArg1, sotArg1Type),       \
+              SOT_CALL_SIG(sotArg2, sotArg2Type),                     \
+              SOT_CALL_SIG(sotArg3, sotArg3Type),                     \
+              SOT_CALL_SIG(sotArg4, sotArg4Type), _1),                \
       sotArg1 << sotArg2 << sotArg3 << sotArg4
 
-#define SOT_INIT_SIGNAL_5(sotFunction, sotArg1, sotArg1Type, sotArg2,          \
-                          sotArg2Type, sotArg3, sotArg3Type, sotArg4,          \
-                          sotArg4Type, sotArg5, sotArg5Type)                   \
-  boost::bind(&sotFunction, SOT_CALL_SIG(sotArg1, sotArg1Type),                \
-              SOT_CALL_SIG(sotArg2, sotArg2Type),                              \
-              SOT_CALL_SIG(sotArg3, sotArg3Type),                              \
-              SOT_CALL_SIG(sotArg4, sotArg4Type),                              \
-              SOT_CALL_SIG(sotArg5, sotArg5Type), _1),                         \
+#define SOT_INIT_SIGNAL_5(sotFunction, sotArg1, sotArg1Type, sotArg2, \
+                          sotArg2Type, sotArg3, sotArg3Type, sotArg4, \
+                          sotArg4Type, sotArg5, sotArg5Type)          \
+  boost::bind(&sotFunction, SOT_CALL_SIG(sotArg1, sotArg1Type),       \
+              SOT_CALL_SIG(sotArg2, sotArg2Type),                     \
+              SOT_CALL_SIG(sotArg3, sotArg3Type),                     \
+              SOT_CALL_SIG(sotArg4, sotArg4Type),                     \
+              SOT_CALL_SIG(sotArg5, sotArg5Type), _1),                \
       sotArg1 << sotArg2 << sotArg3 << sotArg4 << sotArg5
 
-#define SOT_INIT_SIGNAL_6(sotFunction, sotArg1, sotArg1Type, sotArg2,          \
-                          sotArg2Type, sotArg3, sotArg3Type, sotArg4,          \
-                          sotArg4Type, sotArg5, sotArg5Type, sotArg6,          \
-                          sotArg6Type)                                         \
-  boost::bind(                                                                 \
-      &sotFunction, SOT_CALL_SIG(sotArg1, sotArg1Type),                        \
-      SOT_CALL_SIG(sotArg2, sotArg2Type), SOT_CALL_SIG(sotArg3, sotArg3Type),  \
-      SOT_CALL_SIG(sotArg4, sotArg4Type), SOT_CALL_SIG(sotArg5, sotArg5Type),  \
-      SOT_CALL_SIG(sotArg6, sotArg6Type), _1),                                 \
+#define SOT_INIT_SIGNAL_6(sotFunction, sotArg1, sotArg1Type, sotArg2,         \
+                          sotArg2Type, sotArg3, sotArg3Type, sotArg4,         \
+                          sotArg4Type, sotArg5, sotArg5Type, sotArg6,         \
+                          sotArg6Type)                                        \
+  boost::bind(                                                                \
+      &sotFunction, SOT_CALL_SIG(sotArg1, sotArg1Type),                       \
+      SOT_CALL_SIG(sotArg2, sotArg2Type), SOT_CALL_SIG(sotArg3, sotArg3Type), \
+      SOT_CALL_SIG(sotArg4, sotArg4Type), SOT_CALL_SIG(sotArg5, sotArg5Type), \
+      SOT_CALL_SIG(sotArg6, sotArg6Type), _1),                                \
       sotArg1 << sotArg2 << sotArg3 << sotArg4 << sotArg5 << sotArg6
 
-#define SOT_INIT_SIGNAL_7(sotFunction, sotArg1, sotArg1Type, sotArg2,          \
-                          sotArg2Type, sotArg3, sotArg3Type, sotArg4,          \
-                          sotArg4Type, sotArg5, sotArg5Type, sotArg6,          \
-                          sotArg6Type, sotArg7, sotArg7Type)                   \
-  boost::bind(                                                                 \
-      &sotFunction, SOT_CALL_SIG(sotArg1, sotArg1Type),                        \
-      SOT_CALL_SIG(sotArg2, sotArg2Type), SOT_CALL_SIG(sotArg3, sotArg3Type),  \
-      SOT_CALL_SIG(sotArg4, sotArg4Type), SOT_CALL_SIG(sotArg5, sotArg5Type),  \
-      SOT_CALL_SIG(sotArg6, sotArg6Type), SOT_CALL_SIG(sotArg7, sotArg7Type),  \
-      _1),                                                                     \
-      sotArg1 << sotArg2 << sotArg3 << sotArg4 << sotArg5 << sotArg6           \
+#define SOT_INIT_SIGNAL_7(sotFunction, sotArg1, sotArg1Type, sotArg2,         \
+                          sotArg2Type, sotArg3, sotArg3Type, sotArg4,         \
+                          sotArg4Type, sotArg5, sotArg5Type, sotArg6,         \
+                          sotArg6Type, sotArg7, sotArg7Type)                  \
+  boost::bind(                                                                \
+      &sotFunction, SOT_CALL_SIG(sotArg1, sotArg1Type),                       \
+      SOT_CALL_SIG(sotArg2, sotArg2Type), SOT_CALL_SIG(sotArg3, sotArg3Type), \
+      SOT_CALL_SIG(sotArg4, sotArg4Type), SOT_CALL_SIG(sotArg5, sotArg5Type), \
+      SOT_CALL_SIG(sotArg6, sotArg6Type), SOT_CALL_SIG(sotArg7, sotArg7Type), \
+      _1),                                                                    \
+      sotArg1 << sotArg2 << sotArg3 << sotArg4 << sotArg5 << sotArg6          \
               << sotArg7
 
 /* --- MEMBERS MACROS ------------------------------------------------------- */
 /* --- MEMBERS MACROS ------------------------------------------------------- */
 /* --- MEMBERS MACROS ------------------------------------------------------- */
 
-#define SOT_MEMBER_SIGNAL_1(sotFunction, sotArg1, sotArg1Type)                 \
-  boost::bind(&sotFunction, this, SOT_CALL_SIG(sotArg1, sotArg1Type), _1),     \
+#define SOT_MEMBER_SIGNAL_1(sotFunction, sotArg1, sotArg1Type)             \
+  boost::bind(&sotFunction, this, SOT_CALL_SIG(sotArg1, sotArg1Type), _1), \
       sotArg1
 
-#define SOT_MEMBER_SIGNAL_2(sotFunction, sotArg1, sotArg1Type, sotArg2,        \
-                            sotArg2Type)                                       \
-  boost::bind(&sotFunction, this, SOT_CALL_SIG(sotArg1, sotArg1Type),          \
-              SOT_CALL_SIG(sotArg2, sotArg2Type), _1),                         \
+#define SOT_MEMBER_SIGNAL_2(sotFunction, sotArg1, sotArg1Type, sotArg2, \
+                            sotArg2Type)                                \
+  boost::bind(&sotFunction, this, SOT_CALL_SIG(sotArg1, sotArg1Type),   \
+              SOT_CALL_SIG(sotArg2, sotArg2Type), _1),                  \
       sotArg1 << sotArg2
 
-#define SOT_MEMBER_SIGNAL_4(sotFunction, sotArg1, sotArg1Type, sotArg2,        \
-                            sotArg2Type, sotArg3, sotArg3Type, sotArg4,        \
-                            sotArg4Type)                                       \
-  boost::bind(&sotFunction, this, SOT_CALL_SIG(sotArg1, sotArg1Type),          \
-              SOT_CALL_SIG(sotArg2, sotArg2Type),                              \
-              SOT_CALL_SIG(sotArg3, sotArg3Type),                              \
-              SOT_CALL_SIG(sotArg4, sotArg4Type), _1),                         \
+#define SOT_MEMBER_SIGNAL_4(sotFunction, sotArg1, sotArg1Type, sotArg2, \
+                            sotArg2Type, sotArg3, sotArg3Type, sotArg4, \
+                            sotArg4Type)                                \
+  boost::bind(&sotFunction, this, SOT_CALL_SIG(sotArg1, sotArg1Type),   \
+              SOT_CALL_SIG(sotArg2, sotArg2Type),                       \
+              SOT_CALL_SIG(sotArg3, sotArg3Type),                       \
+              SOT_CALL_SIG(sotArg4, sotArg4Type), _1),                  \
       sotArg1 << sotArg2 << sotArg3 << sotArg4
 
-#define SOT_MEMBER_SIGNAL_5(sotFunction, sotArg1, sotArg1Type, sotArg2,        \
-                            sotArg2Type, sotArg3, sotArg3Type, sotArg4,        \
-                            sotArg4Type, sotArg5, sotArg5Type)                 \
-  boost::bind(&sotFunction, this, SOT_CALL_SIG(sotArg1, sotArg1Type),          \
-              SOT_CALL_SIG(sotArg2, sotArg2Type),                              \
-              SOT_CALL_SIG(sotArg3, sotArg3Type),                              \
-              SOT_CALL_SIG(sotArg4, sotArg4Type),                              \
-              SOT_CALL_SIG(sotArg5, sotArg5Type), _1),                         \
+#define SOT_MEMBER_SIGNAL_5(sotFunction, sotArg1, sotArg1Type, sotArg2, \
+                            sotArg2Type, sotArg3, sotArg3Type, sotArg4, \
+                            sotArg4Type, sotArg5, sotArg5Type)          \
+  boost::bind(&sotFunction, this, SOT_CALL_SIG(sotArg1, sotArg1Type),   \
+              SOT_CALL_SIG(sotArg2, sotArg2Type),                       \
+              SOT_CALL_SIG(sotArg3, sotArg3Type),                       \
+              SOT_CALL_SIG(sotArg4, sotArg4Type),                       \
+              SOT_CALL_SIG(sotArg5, sotArg5Type), _1),                  \
       sotArg1 << sotArg2 << sotArg3 << sotArg4 << sotArg5
 
-#define SOT_MEMBER_SIGNAL_6(sotFunction, sotArg1, sotArg1Type, sotArg2,        \
-                            sotArg2Type, sotArg3, sotArg3Type, sotArg4,        \
-                            sotArg4Type, sotArg5, sotArg5Type, sotArg6,        \
-                            sotArg6Type)                                       \
-  boost::bind(                                                                 \
-      &sotFunction, this, SOT_CALL_SIG(sotArg1, sotArg1Type),                  \
-      SOT_CALL_SIG(sotArg2, sotArg2Type), SOT_CALL_SIG(sotArg3, sotArg3Type),  \
-      SOT_CALL_SIG(sotArg4, sotArg4Type), SOT_CALL_SIG(sotArg5, sotArg5Type),  \
-      SOT_CALL_SIG(sotArg6, sotArg6Type), _1),                                 \
+#define SOT_MEMBER_SIGNAL_6(sotFunction, sotArg1, sotArg1Type, sotArg2,       \
+                            sotArg2Type, sotArg3, sotArg3Type, sotArg4,       \
+                            sotArg4Type, sotArg5, sotArg5Type, sotArg6,       \
+                            sotArg6Type)                                      \
+  boost::bind(                                                                \
+      &sotFunction, this, SOT_CALL_SIG(sotArg1, sotArg1Type),                 \
+      SOT_CALL_SIG(sotArg2, sotArg2Type), SOT_CALL_SIG(sotArg3, sotArg3Type), \
+      SOT_CALL_SIG(sotArg4, sotArg4Type), SOT_CALL_SIG(sotArg5, sotArg5Type), \
+      SOT_CALL_SIG(sotArg6, sotArg6Type), _1),                                \
       sotArg1 << sotArg2 << sotArg3 << sotArg4 << sotArg5 << sotArg6
diff --git a/include/sot/core/macros.hh b/include/sot/core/macros.hh
index cc89e248..e6b4b338 100644
--- a/include/sot/core/macros.hh
+++ b/include/sot/core/macros.hh
@@ -6,7 +6,7 @@
 
 #define SOT_CORE_DISABLE_WARNING_PUSH __pragma(warning(push))
 #define SOT_CORE_DISABLE_WARNING_POP __pragma(warning(pop))
-#define SOT_CORE_DISABLE_WARNING(warningNumber)                                \
+#define SOT_CORE_DISABLE_WARNING(warningNumber) \
   __pragma(warning(disable : warningNumber))
 #define SOT_CORE_DISABLE_WARNING_DEPRECATED SOT_CORE_DISABLE_WARNING(4996)
 #define SOT_CORE_DISABLE_WARNING_FALLTHROUGH
@@ -16,11 +16,11 @@
 #define SOT_CORE_DO_PRAGMA(X) _Pragma(#X)
 #define SOT_CORE_DISABLE_WARNING_PUSH SOT_CORE_DO_PRAGMA(GCC diagnostic push)
 #define SOT_CORE_DISABLE_WARNING_POP SOT_CORE_DO_PRAGMA(GCC diagnostic pop)
-#define SOT_CORE_DISABLE_WARNING(warningName)                                  \
+#define SOT_CORE_DISABLE_WARNING(warningName) \
   SOT_CORE_DO_PRAGMA(GCC diagnostic ignored #warningName)
-#define SOT_CORE_DISABLE_WARNING_DEPRECATED                                    \
+#define SOT_CORE_DISABLE_WARNING_DEPRECATED \
   SOT_CORE_DISABLE_WARNING(-Wdeprecated - declarations)
-#define SOT_CORE_DISABLE_WARNING_FALLTHROUGH                                   \
+#define SOT_CORE_DISABLE_WARNING_FALLTHROUGH \
   SOT_CORE_DISABLE_WARNING(-Wimplicit - fallthrough)
 
 #else
diff --git a/include/sot/core/madgwickahrs.hh b/include/sot/core/madgwickahrs.hh
index a80021db..2449d106 100644
--- a/include/sot/core/madgwickahrs.hh
+++ b/include/sot/core/madgwickahrs.hh
@@ -48,12 +48,14 @@
 /* --- INCLUDE --------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 
-#include "boost/assign.hpp"
 #include <dynamic-graph/signal-helper.h>
+
 #include <map>
 #include <sot/core/matrix-geometry.hh>
 
-#define betaDef 0.01 // 2 * proportional g
+#include "boost/assign.hpp"
+
+#define betaDef 0.01  // 2 * proportional g
 
 namespace dynamicgraph {
 namespace sot {
@@ -84,7 +86,7 @@ class SOTMADGWICKAHRS_EXPORT MadgwickAHRS : public ::dynamicgraph::Entity {
   typedef MadgwickAHRS EntityClassName;
   DYNAMIC_GRAPH_ENTITY_DECL();
 
-public:
+ public:
   EIGEN_MAKE_ALIGNED_OPERATOR_NEW
 
   /* --- CONSTRUCTOR ---- */
@@ -104,7 +106,7 @@ public:
   /// Estimated orientation of IMU as a quaternion
   DECLARE_SIGNAL_OUT(imu_quat, dynamicgraph::Vector);
 
-protected:
+ protected:
   /* --- COMMANDS --- */
   /* --- ENTITY INHERITANCE --- */
   virtual void display(std::ostream &os) const;
@@ -114,7 +116,7 @@ protected:
   void madgwickAHRSupdateIMU(double gx, double gy, double gz, double ax,
                              double ay, double az);
 
-protected:
+ protected:
   /// true if the entity has been successfully initialized
   bool m_initSucceeded;
   /// 2 * proportional gain (Kp)
@@ -124,8 +126,8 @@ protected:
   /// sample frequency in Hz
   double m_sampleFreq;
 
-}; // class MadgwickAHRS
-} // namespace sot
-} // namespace dynamicgraph
+};  // class MadgwickAHRS
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // #ifndef __sot_torque_control_madgwickahrs_H__
+#endif  // #ifndef __sot_torque_control_madgwickahrs_H__
diff --git a/include/sot/core/mailbox-vector.hh b/include/sot/core/mailbox-vector.hh
index f1ee0ff7..8ffdcbeb 100644
--- a/include/sot/core/mailbox-vector.hh
+++ b/include/sot/core/mailbox-vector.hh
@@ -11,10 +11,10 @@
 #define __SOT_MAILBOX_VECTOR_HH
 
 /* --- SOT PLUGIN  --- */
-#include <sot/core/mailbox.hh>
-
 #include <dynamic-graph/linear-algebra.h>
 
+#include <sot/core/mailbox.hh>
+
 /* --------------------------------------------------------------------- */
 /* --- API ------------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
@@ -38,13 +38,13 @@ namespace sot {
 #ifdef WIN32
 class MAILBOX_VECTOR_EXPORT MailboxVector
     : public Mailbox<dynamicgraph::Vector> {
-public:
+ public:
   MailboxVector(const std::string &name);
 };
 #else
 typedef Mailbox<dynamicgraph::Vector> MailboxVector;
 #endif
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // #ifndef  __SOT_MAILBOX_HH
+#endif  // #ifndef  __SOT_MAILBOX_HH
diff --git a/include/sot/core/mailbox.hh b/include/sot/core/mailbox.hh
index af87346b..77943002 100644
--- a/include/sot/core/mailbox.hh
+++ b/include/sot/core/mailbox.hh
@@ -33,20 +33,22 @@ namespace sot {
 
 namespace dg = dynamicgraph;
 
-template <class Object> struct MailboxTimestampedObject {
+template <class Object>
+struct MailboxTimestampedObject {
   Object obj;
   struct timeval timestamp;
 };
 
-template <class Object> class Mailbox : public dg::Entity {
-public:
+template <class Object>
+class Mailbox : public dg::Entity {
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-public:
+ public:
   typedef MailboxTimestampedObject<Object> sotTimestampedObject;
 
-public:
+ public:
   Mailbox(const std::string &name);
   ~Mailbox(void);
 
@@ -58,13 +60,13 @@ public:
 
   bool hasBeenUpdated(void);
 
-protected:
+ protected:
   boost::timed_mutex mainObjectMutex;
   Object mainObject;
   struct timeval mainTimeStamp;
   bool update;
 
-public: /* --- SIGNALS --- */
+ public: /* --- SIGNALS --- */
   dynamicgraph::SignalTimeDependent<sotTimestampedObject, int> SOUT;
   dynamicgraph::SignalTimeDependent<Object, int> objSOUT;
   dynamicgraph::SignalTimeDependent<struct timeval, int> timeSOUT;
@@ -76,7 +78,8 @@ template <class Object>
 struct signal_io<sot::MailboxTimestampedObject<Object> >
     : signal_io_unimplemented<sot::MailboxTimestampedObject<Object> > {};
 
-template <> struct signal_io<timeval> : signal_io_unimplemented<timeval> {};
+template <>
+struct signal_io<timeval> : signal_io_unimplemented<timeval> {};
 } /* namespace dynamicgraph */
 
-#endif // #ifndef  __SOT_MAILBOX_HH
+#endif  // #ifndef  __SOT_MAILBOX_HH
diff --git a/include/sot/core/mailbox.hxx b/include/sot/core/mailbox.hxx
index a34b4b77..110a7121 100644
--- a/include/sot/core/mailbox.hxx
+++ b/include/sot/core/mailbox.hxx
@@ -20,7 +20,10 @@ namespace sot {
 /* -------------------------------------------------------------------------- */
 template <class Object>
 Mailbox<Object>::Mailbox(const std::string &name)
-    : Entity(name), mainObjectMutex(), mainObject(), update(false)
+    : Entity(name),
+      mainObjectMutex(),
+      mainObject(),
+      update(false)
 
       ,
       SOUT(boost::bind(&Mailbox::get, this, _1, _2), sotNOSIGNAL,
@@ -33,14 +36,16 @@ Mailbox<Object>::Mailbox(const std::string &name)
   SOUT.setDependencyType(TimeDependency<int>::BOOL_DEPENDENT);
 }
 
-template <class Object> Mailbox<Object>::~Mailbox(void) {
+template <class Object>
+Mailbox<Object>::~Mailbox(void) {
   boost::timed_mutex::scoped_lock lockMain(mainObjectMutex);
 }
 
 /* -------------------------------------------------------------------------- */
 /* --- ACCESS --------------------------------------------------------------- */
 /* -------------------------------------------------------------------------- */
-template <class Object> bool Mailbox<Object>::hasBeenUpdated(void) {
+template <class Object>
+bool Mailbox<Object>::hasBeenUpdated(void) {
   boost::timed_mutex::scoped_try_lock lockMain(this->mainObjectMutex);
 
   if (lockMain.owns_lock()) {
@@ -52,9 +57,9 @@ template <class Object> bool Mailbox<Object>::hasBeenUpdated(void) {
 
 /* -------------------------------------------------------------------------- */
 template <class Object>
-typename Mailbox<Object>::sotTimestampedObject &
-Mailbox<Object>::get(typename Mailbox<Object>::sotTimestampedObject &res,
-                     const int & /*dummy*/) {
+typename Mailbox<Object>::sotTimestampedObject &Mailbox<Object>::get(
+    typename Mailbox<Object>::sotTimestampedObject &res,
+    const int & /*dummy*/) {
   boost::timed_mutex::scoped_try_lock lockMain(this->mainObjectMutex);
 
   if (lockMain.owns_lock()) {
@@ -69,7 +74,8 @@ Mailbox<Object>::get(typename Mailbox<Object>::sotTimestampedObject &res,
 }
 
 /* -------------------------------------------------------------------------- */
-template <class Object> void Mailbox<Object>::post(const Object &value) {
+template <class Object>
+void Mailbox<Object>::post(const Object &value) {
   boost::timed_mutex::scoped_lock lockMain(this->mainObjectMutex);
   mainObject = value;
   gettimeofday(&this->mainTimeStamp, NULL);
@@ -98,19 +104,19 @@ timeval &Mailbox<Object>::getTimestamp(struct timeval &res, const int &time) {
 } /* namespace dynamicgraph */
 /* Macro for template specialization */
 #ifndef WIN32
-#define MAILBOX_TEMPLATE_SPE(S)                                                \
-  namespace dynamicgraph {                                                     \
-  namespace sot {                                                              \
-  template void Mailbox<S>::post(const S &obj);                                \
-  template dynamicgraph::Vector &Mailbox<S>::getObject(S &res,                 \
-                                                       const int &time);       \
-  template bool Mailbox<S>::hasBeenUpdated(void);                              \
-  template Mailbox<S>::~Mailbox();                                             \
-  template Mailbox<S>::sotTimestampedObject &                                  \
-  Mailbox<S>::get(Mailbox<S>::sotTimestampedObject &res, const int &dummy);    \
-  template Mailbox<S>::Mailbox(const std::string &name);                       \
-  }                                                                            \
-  }    // namespace sot namespace dynamicgraph
-#endif // WIN32
-
-#endif // #ifdef __SOT_MAILBOX_T_CPP
+#define MAILBOX_TEMPLATE_SPE(S)                                          \
+  namespace dynamicgraph {                                               \
+  namespace sot {                                                        \
+  template void Mailbox<S>::post(const S &obj);                          \
+  template dynamicgraph::Vector &Mailbox<S>::getObject(S &res,           \
+                                                       const int &time); \
+  template bool Mailbox<S>::hasBeenUpdated(void);                        \
+  template Mailbox<S>::~Mailbox();                                       \
+  template Mailbox<S>::sotTimestampedObject &Mailbox<S>::get(            \
+      Mailbox<S>::sotTimestampedObject &res, const int &dummy);          \
+  template Mailbox<S>::Mailbox(const std::string &name);                 \
+  }                                                                      \
+  }     // namespace sot namespace dynamicgraph
+#endif  // WIN32
+
+#endif  // #ifdef __SOT_MAILBOX_T_CPP
diff --git a/include/sot/core/matrix-constant.hh b/include/sot/core/matrix-constant.hh
index f8fc26be..a3711953 100644
--- a/include/sot/core/matrix-constant.hh
+++ b/include/sot/core/matrix-constant.hh
@@ -23,12 +23,12 @@ namespace command {
 namespace matrixConstant {
 class Resize;
 }
-} // namespace command
+}  // namespace command
 
 class MatrixConstant : public Entity {
   friend class command::matrixConstant::Resize;
 
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
@@ -37,7 +37,7 @@ public:
 
   void setValue(const dynamicgraph::Matrix &inValue);
 
-public:
+ public:
   MatrixConstant(const std::string &name);
 
   virtual ~MatrixConstant(void) {}
@@ -45,5 +45,5 @@ public:
   SignalTimeDependent<dynamicgraph::Matrix, int> SOUT;
 };
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
diff --git a/include/sot/core/matrix-geometry.hh b/include/sot/core/matrix-geometry.hh
index 52046447..aefef558 100644
--- a/include/sot/core/matrix-geometry.hh
+++ b/include/sot/core/matrix-geometry.hh
@@ -9,10 +9,11 @@
 #define __SOT_MATRIX_GEOMETRY_H__
 
 /* --- Matrix --- */
-#include <Eigen/Core>
-#include <Eigen/Geometry>
 #include <dynamic-graph/eigen-io.h>
 #include <dynamic-graph/linear-algebra.h>
+
+#include <Eigen/Core>
+#include <Eigen/Geometry>
 #include <sot/core/api.hh>
 
 #define MRAWDATA(x) x.data()
@@ -24,29 +25,29 @@
 namespace dynamicgraph {
 namespace sot {
 
-#define EIGEN_MAKE_TYPEDEFS(Type, TypeSuffix, Size, SizeSuffix)                \
-  /** \ingroup matrixtypedefs */                                               \
-  typedef Eigen::Matrix<Type, Size, Size> Matrix##SizeSuffix##TypeSuffix;      \
-  /** \ingroup matrixtypedefs */                                               \
-  typedef Eigen::Matrix<Type, Size, 1> Vector##SizeSuffix##TypeSuffix;         \
-  /** \ingroup matrixtypedefs */                                               \
+#define EIGEN_MAKE_TYPEDEFS(Type, TypeSuffix, Size, SizeSuffix)           \
+  /** \ingroup matrixtypedefs */                                          \
+  typedef Eigen::Matrix<Type, Size, Size> Matrix##SizeSuffix##TypeSuffix; \
+  /** \ingroup matrixtypedefs */                                          \
+  typedef Eigen::Matrix<Type, Size, 1> Vector##SizeSuffix##TypeSuffix;    \
+  /** \ingroup matrixtypedefs */                                          \
   typedef Eigen::Matrix<Type, 1, Size> RowVector##SizeSuffix##TypeSuffix;
 
-#define EIGEN_MAKE_FIXED_TYPEDEFS(Type, TypeSuffix, Size)                      \
-  /** \ingroup matrixtypedefs */                                               \
-  typedef Eigen::Matrix<Type, Size, Eigen::Dynamic>                            \
-      Matrix##Size##X##TypeSuffix;                                             \
-  /** \ingroup matrixtypedefs */                                               \
+#define EIGEN_MAKE_FIXED_TYPEDEFS(Type, TypeSuffix, Size) \
+  /** \ingroup matrixtypedefs */                          \
+  typedef Eigen::Matrix<Type, Size, Eigen::Dynamic>       \
+      Matrix##Size##X##TypeSuffix;                        \
+  /** \ingroup matrixtypedefs */                          \
   typedef Eigen::Matrix<Type, Eigen::Dynamic, Size> Matrix##X##Size##TypeSuffix;
 
-#define EIGEN_MAKE_TYPEDEFS_ALL_SIZES(Type, TypeSuffix)                        \
-  EIGEN_MAKE_TYPEDEFS(Type, TypeSuffix, 1, 1)                                  \
-  EIGEN_MAKE_TYPEDEFS(Type, TypeSuffix, 5, 5)                                  \
-  EIGEN_MAKE_TYPEDEFS(Type, TypeSuffix, 6, 6)                                  \
-  EIGEN_MAKE_TYPEDEFS(Type, TypeSuffix, 7, 7)                                  \
-  EIGEN_MAKE_FIXED_TYPEDEFS(Type, TypeSuffix, 1)                               \
-  EIGEN_MAKE_FIXED_TYPEDEFS(Type, TypeSuffix, 5)                               \
-  EIGEN_MAKE_FIXED_TYPEDEFS(Type, TypeSuffix, 6)                               \
+#define EIGEN_MAKE_TYPEDEFS_ALL_SIZES(Type, TypeSuffix) \
+  EIGEN_MAKE_TYPEDEFS(Type, TypeSuffix, 1, 1)           \
+  EIGEN_MAKE_TYPEDEFS(Type, TypeSuffix, 5, 5)           \
+  EIGEN_MAKE_TYPEDEFS(Type, TypeSuffix, 6, 6)           \
+  EIGEN_MAKE_TYPEDEFS(Type, TypeSuffix, 7, 7)           \
+  EIGEN_MAKE_FIXED_TYPEDEFS(Type, TypeSuffix, 1)        \
+  EIGEN_MAKE_FIXED_TYPEDEFS(Type, TypeSuffix, 5)        \
+  EIGEN_MAKE_FIXED_TYPEDEFS(Type, TypeSuffix, 6)        \
   EIGEN_MAKE_FIXED_TYPEDEFS(Type, TypeSuffix, 7)
 
 EIGEN_MAKE_TYPEDEFS_ALL_SIZES(int, i)
@@ -85,7 +86,6 @@ typedef Eigen::Quaternion<double> SOT_CORE_EXPORT Quaternion;
 typedef Eigen::Map<Quaternion> SOT_CORE_EXPORT QuaternionMap;
 
 inline void buildFrom(const MatrixHomogeneous &MH, MatrixTwist &MT) {
-
   Eigen::Vector3d _t = MH.translation();
   MatrixRotation R(MH.linear());
   Eigen::Matrix3d Tx;
@@ -99,7 +99,7 @@ inline void buildFrom(const MatrixHomogeneous &MH, MatrixTwist &MT) {
   MT.block<3, 3>(3, 3) = R;
 }
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 #endif /* #ifndef __SOT_MATRIX_GEOMETRY_H__ */
diff --git a/include/sot/core/matrix-svd.hh b/include/sot/core/matrix-svd.hh
index b9f1f040..d3f768ae 100644
--- a/include/sot/core/matrix-svd.hh
+++ b/include/sot/core/matrix-svd.hh
@@ -11,9 +11,10 @@
 #define __SOT_MATRIX_SVD_H__
 
 /* --- Matrix --- */
-#include <Eigen/SVD>
 #include <dynamic-graph/linear-algebra.h>
 
+#include <Eigen/SVD>
+
 /* --------------------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
@@ -34,6 +35,6 @@ void dampedInverse(const Matrix &_inputMatrix, Matrix &_inverseMatrix,
 void dampedInverse(const Matrix &_inputMatrix, Matrix &_inverseMatrix,
                    const double threshold = 1e-6);
 
-} // namespace dynamicgraph
+}  // namespace dynamicgraph
 
 #endif /* #ifndef __SOT_MATRIX_SVD_H__ */
diff --git a/include/sot/core/memory-task-sot.hh b/include/sot/core/memory-task-sot.hh
index 3fcb0f22..aa8fb484 100644
--- a/include/sot/core/memory-task-sot.hh
+++ b/include/sot/core/memory-task-sot.hh
@@ -10,10 +10,11 @@
 #ifndef __SOT_MEMORY_TASK_HH
 #define __SOT_MEMORY_TASK_HH
 
-#include "sot/core/api.hh"
 #include <sot/core/matrix-svd.hh>
 #include <sot/core/task-abstract.hh>
 
+#include "sot/core/api.hh"
+
 /* --------------------------------------------------------------------- */
 /* --- CLASS ----------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
@@ -22,7 +23,7 @@ namespace dynamicgraph {
 namespace sot {
 
 class SOT_CORE_EXPORT MemoryTaskSOT : public TaskAbstract::MemoryTaskAbstract {
-public: //   protected:
+ public:  //   protected:
   typedef Eigen::Map<Matrix, Eigen::internal::traits<Matrix>::Alignment>
       Kernel_t;
   typedef Eigen::Map<const Matrix, Eigen::internal::traits<Matrix>::Alignment>
@@ -30,17 +31,16 @@ public: //   protected:
 
   /* Internal memory to reduce the dynamic allocation at task resolution. */
   dynamicgraph::Vector err, tmpTask, tmpVar, tmpControl;
-  dynamicgraph::Matrix Jt; //( nJ,mJ );
+  dynamicgraph::Matrix Jt;  //( nJ,mJ );
 
-  dynamicgraph::Matrix JK; //(nJ,mJ);
+  dynamicgraph::Matrix JK;  //(nJ,mJ);
 
   SVD_t svd;
   Kernel_t kernel;
 
   void resizeKernel(const Matrix::Index r, const Matrix::Index c) {
     if (kernel.rows() != r || kernel.cols() != c) {
-      if (kernelMem.size() < r * c)
-        kernelMem.resize(r, c);
+      if (kernelMem.size() < r * c) kernelMem.resize(r, c);
       new (&kernel) Kernel_t(kernelMem.data(), r, c);
     }
   }
@@ -50,7 +50,7 @@ public: //   protected:
     return kernel;
   }
 
-public:
+ public:
   /**
    * \param mJ is the number of joints
    * \param nJ the number of feature in the task
@@ -59,7 +59,7 @@ public:
 
   void display(std::ostream &os) const;
 
-private:
+ private:
   void initMemory(const Matrix::Index nJ, const Matrix::Index mJ);
 
   Matrix kernelMem;
@@ -68,4 +68,4 @@ private:
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // __SOT_MEMORY_TASK_HH
+#endif  // __SOT_MEMORY_TASK_HH
diff --git a/include/sot/core/motion-period.hh b/include/sot/core/motion-period.hh
index 4adbf274..537ed410 100644
--- a/include/sot/core/motion-period.hh
+++ b/include/sot/core/motion-period.hh
@@ -20,6 +20,7 @@
 /* SOT */
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/exception-task.hh>
 
 /* --------------------------------------------------------------------- */
@@ -47,12 +48,11 @@ namespace dynamicgraph {
 namespace sot {
 
 class SOTMOTIONPERIOD_EXPORT MotionPeriod : public dynamicgraph::Entity {
-
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-protected:
+ protected:
   enum MotionPeriodType { MOTION_CONSTANT, MOTION_SIN, MOTION_COS };
 
   struct sotMotionParam {
@@ -69,10 +69,10 @@ protected:
   void resize(const unsigned int &size);
 
   /* --- SIGNALS ------------------------------------------------------------ */
-public:
+ public:
   dynamicgraph::SignalTimeDependent<dynamicgraph::Vector, int> motionSOUT;
 
-public:
+ public:
   MotionPeriod(const std::string &name);
   virtual ~MotionPeriod(void) {}
 
@@ -85,7 +85,7 @@ public:
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOT_JOINTLIMITS_HH__
+#endif  // #ifndef __SOT_JOINTLIMITS_HH__
 
 /*
  * Local variables:
diff --git a/include/sot/core/multi-bound.hh b/include/sot/core/multi-bound.hh
index 755758b7..24bde5a4 100644
--- a/include/sot/core/multi-bound.hh
+++ b/include/sot/core/multi-bound.hh
@@ -19,10 +19,12 @@
 #include <vector>
 
 /* SOT */
-#include "sot/core/api.hh"
 #include <dynamic-graph/signal-caster.h>
+
 #include <sot/core/exception-task.hh>
 
+#include "sot/core/api.hh"
+
 /* --------------------------------------------------------------------- */
 /* --- CLASS ----------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
@@ -31,34 +33,34 @@ namespace dynamicgraph {
 namespace sot {
 
 class SOT_CORE_EXPORT MultiBound {
-public:
+ public:
   enum MultiBoundModeType { MODE_SINGLE, MODE_DOUBLE };
   enum SupInfType { BOUND_SUP, BOUND_INF };
 
-public: // protected:
+ public:  // protected:
   MultiBoundModeType mode;
   double boundSingle;
   double boundSup, boundInf;
   bool boundSupSetup, boundInfSetup;
 
-public:
+ public:
   MultiBound(const double x = 0.);
   MultiBound(const double xi, const double xs);
   MultiBound(const double x, const SupInfType bound);
   MultiBound(const MultiBound &clone);
 
-public: // Acessors
+ public:  // Acessors
   MultiBoundModeType getMode(void) const;
   double getSingleBound(void) const;
   double getDoubleBound(const SupInfType bound) const;
   bool getDoubleBoundSetup(const SupInfType bound) const;
 
-public: // Modifiors
+ public:  // Modifiors
   void setDoubleBound(SupInfType boundType, double boundValue);
   void unsetDoubleBound(SupInfType boundType);
   void setSingleBound(double boundValue);
 
-public:
+ public:
   SOT_CORE_EXPORT friend std::ostream &operator<<(std::ostream &os,
                                                   const MultiBound &m);
   SOT_CORE_EXPORT friend std::istream &operator>>(std::istream &is,
@@ -77,4 +79,4 @@ template <>
 struct signal_io<sot::MultiBound> : signal_io_unimplemented<sot::MultiBound> {};
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOT_MultiBound_H__
+#endif  // #ifndef __SOT_MultiBound_H__
diff --git a/include/sot/core/neck-limitation.hh b/include/sot/core/neck-limitation.hh
index 3d0a1abf..40f3ccc2 100644
--- a/include/sot/core/neck-limitation.hh
+++ b/include/sot/core/neck-limitation.hh
@@ -20,6 +20,7 @@
 /* SOT */
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/task-abstract.hh>
 
 /* STD */
@@ -49,11 +50,11 @@ namespace dynamicgraph {
 namespace sot {
 
 class NeckLimitation_EXPORT NeckLimitation : public dynamicgraph::Entity {
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-protected:
+ protected:
   unsigned int panRank, tiltRank;
   static const unsigned int PAN_RANK_DEFAULT;
   static const unsigned int TILT_RANK_DEFAULT;
@@ -66,24 +67,23 @@ protected:
   static const double COEFF_AFFINE_DEFAULT;
   static const double SIGN_TILT_DEFAULT;
 
-public: /* --- CONSTRUCTION --- */
+ public: /* --- CONSTRUCTION --- */
   NeckLimitation(const std::string &name);
   virtual ~NeckLimitation(void);
 
-public: /* --- SIGNAL --- */
+ public: /* --- SIGNAL --- */
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> jointSIN;
   dynamicgraph::SignalTimeDependent<dynamicgraph::Vector, int> jointSOUT;
 
-public: /* --- FUNCTIONS --- */
-  dynamicgraph::Vector &
-  computeJointLimitation(dynamicgraph::Vector &jointLimited,
-                         const int &timeSpec);
+ public: /* --- FUNCTIONS --- */
+  dynamicgraph::Vector &computeJointLimitation(
+      dynamicgraph::Vector &jointLimited, const int &timeSpec);
 
-public: /* --- PARAMS --- */
+ public: /* --- PARAMS --- */
   virtual void display(std::ostream &os) const;
 };
 
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOT_NeckLimitation_H__
+#endif  // #ifndef __SOT_NeckLimitation_H__
diff --git a/include/sot/core/op-point-modifier.hh b/include/sot/core/op-point-modifier.hh
index d0de4871..5ac5fdcd 100644
--- a/include/sot/core/op-point-modifier.hh
+++ b/include/sot/core/op-point-modifier.hh
@@ -12,6 +12,7 @@
 
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/matrix-geometry.hh>
 
@@ -46,18 +47,18 @@ namespace sot {
 /// transformation.
 ///
 class SOTOPPOINTMODIFIER_EXPORT OpPointModifier : public dynamicgraph::Entity {
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-public:
+ public:
   dynamicgraph::SignalPtr<dynamicgraph::Matrix, int> jacobianSIN;
   dynamicgraph::SignalPtr<MatrixHomogeneous, int> positionSIN;
 
   dynamicgraph::SignalTimeDependent<dynamicgraph::Matrix, int> jacobianSOUT;
   dynamicgraph::SignalTimeDependent<MatrixHomogeneous, int> positionSOUT;
 
-public:
+ public:
   OpPointModifier(const std::string &name);
   virtual ~OpPointModifier(void) {}
 
@@ -69,7 +70,7 @@ public:
   void setTransformationBySignalName(std::istringstream &cmdArgs);
   const Eigen::Matrix4d &getTransformation(void);
 
-private:
+ private:
   MatrixHomogeneous transformation;
 
   /* This bool tunes the effect of the modifier for end-effector Jacobian (ie
@@ -82,4 +83,4 @@ private:
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif //  __SOT_OP_POINT_MODIFIOR_H__
+#endif  //  __SOT_OP_POINT_MODIFIOR_H__
diff --git a/include/sot/core/parameter-server.hh b/include/sot/core/parameter-server.hh
index 8b71d887..004cd93c 100644
--- a/include/sot/core/parameter-server.hh
+++ b/include/sot/core/parameter-server.hh
@@ -35,12 +35,14 @@
 /* --- INCLUDE --------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 
-#include "boost/assign.hpp"
 #include <dynamic-graph/signal-helper.h>
+
 #include <map>
 #include <sot/core/matrix-geometry.hh>
 #include <sot/core/robot-utils.hh>
 
+#include "boost/assign.hpp"
+
 namespace dynamicgraph {
 namespace sot {
 
@@ -56,7 +58,7 @@ class SOTParameterServer_EXPORT ParameterServer
   typedef ParameterServer EntityClassName;
   DYNAMIC_GRAPH_ENTITY_DECL();
 
-public:
+ public:
   /* --- CONSTRUCTOR ---- */
   ParameterServer(const std::string &name);
 
@@ -94,7 +96,7 @@ public:
   void setRightFootSoleXYZ(const dynamicgraph::Vector &);
   void setRightFootForceSensorXYZ(const dynamicgraph::Vector &);
   void setFootFrameName(const std::string &, const std::string &);
-  void setHandFrameName(const std::string&, const std::string&);
+  void setHandFrameName(const std::string &, const std::string &);
   void setImuJointName(const std::string &);
   void displayRobotUtil();
   /// @}
@@ -113,8 +115,8 @@ public:
     m_robot_util->set_parameter<Type>(ParameterName, ParameterValue);
   }
 
-  template <typename Type> Type getParameter(const std::string &ParameterName) {
-
+  template <typename Type>
+  Type getParameter(const std::string &ParameterName) {
     if (!m_initSucceeded) {
       DYNAMIC_GRAPH_ENTITY_WARNING(*this)
           << "Cannot get parameter " << ParameterName
@@ -131,25 +133,26 @@ public:
   /* --- ENTITY INHERITANCE --- */
   virtual void display(std::ostream &os) const;
 
-protected:
+ protected:
   RobotUtilShrPtr m_robot_util;
-  bool m_initSucceeded; /// true if the entity has been successfully initialized
+  bool
+      m_initSucceeded;  /// true if the entity has been successfully initialized
   double m_dt;          /// control loop time period
-  bool m_emergency_stop_triggered; /// true if an emergency condition as been
-                                   /// triggered either by an other entity, or
-                                   /// by control limit violation
-  bool m_is_first_iter; /// true at the first iteration, false otherwise
+  bool m_emergency_stop_triggered;  /// true if an emergency condition as been
+                                    /// triggered either by an other entity, or
+                                    /// by control limit violation
+  bool m_is_first_iter;  /// true at the first iteration, false otherwise
   int m_iter;
-  double m_sleep_time; /// time to sleep at every iteration (to slow down
-                       /// simulation)
+  double m_sleep_time;  /// time to sleep at every iteration (to slow down
+                        /// simulation)
 
   bool convertJointNameToJointId(const std::string &name, unsigned int &id);
   bool isJointInRange(unsigned int id, double q);
   void updateJointCtrlModesOutputSignal();
 
-}; // class ParameterServer
+};  // class ParameterServer
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // #ifndef __sot_torque_control_control_manager_H__
+#endif  // #ifndef __sot_torque_control_control_manager_H__
diff --git a/include/sot/core/periodic-call-entity.hh b/include/sot/core/periodic-call-entity.hh
index eb7bc82c..2bfe83a2 100644
--- a/include/sot/core/periodic-call-entity.hh
+++ b/include/sot/core/periodic-call-entity.hh
@@ -17,6 +17,7 @@
 /* SOT */
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/periodic-call-entity.hh>
 #include <sot/core/periodic-call.hh>
 /* STD */
@@ -55,8 +56,7 @@ namespace sot {
 class PeriodicCallEntity_EXPORT PeriodicCallEntity
     : public Entity,
       protected sot::PeriodicCall {
-
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
@@ -68,17 +68,17 @@ public:
 
   /* --- FUNCTIONS ------------------------------------------------------------
    */
-public:
+ public:
   PeriodicCallEntity(const std::string &name);
   virtual ~PeriodicCallEntity(void) {}
 
   virtual void display(std::ostream &os) const;
 };
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // #ifndef __SOT_PERIODICCALL_ENTITY_HH__
+#endif  // #ifndef __SOT_PERIODICCALL_ENTITY_HH__
 
 /*
  * Local variables:
diff --git a/include/sot/core/periodic-call.hh b/include/sot/core/periodic-call.hh
index b5b223ed..1fa1c1a3 100644
--- a/include/sot/core/periodic-call.hh
+++ b/include/sot/core/periodic-call.hh
@@ -17,6 +17,7 @@
 /* SOT */
 #include <dynamic-graph/entity.h>
 #include <dynamic-graph/signal-base.h>
+
 #include <sot/core/api.hh>
 /* STD */
 #include <list>
@@ -34,7 +35,7 @@ namespace sot {
   \class PeriodicCall
 */
 class SOT_CORE_EXPORT PeriodicCall {
-protected:
+ protected:
   struct SignalToCall {
     dynamicgraph::SignalBase<int> *signal;
     unsigned int downsamplingFactor;
@@ -57,7 +58,7 @@ protected:
 
   /* --- FUNCTIONS ------------------------------------------------------------
    */
-public:
+ public:
   PeriodicCall(void);
   virtual ~PeriodicCall(void) {}
 
@@ -79,10 +80,10 @@ public:
   void display(std::ostream &os) const;
 };
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // #ifndef __SOT_PERIODICCALL_HH__
+#endif  // #ifndef __SOT_PERIODICCALL_HH__
 
 /*
  * Local variables:
diff --git a/include/sot/core/pool.hh b/include/sot/core/pool.hh
index 87a92a67..f68118de 100644
--- a/include/sot/core/pool.hh
+++ b/include/sot/core/pool.hh
@@ -20,11 +20,13 @@
 #include <string>
 
 /* --- SOT --- */
-#include "sot/core/api.hh"
 #include <dynamic-graph/pool.h>
 #include <dynamic-graph/signal-base.h>
+
 #include <sot/core/exception-factory.hh>
 
+#include "sot/core/api.hh"
+
 /* --------------------------------------------------------------------- */
 /* --- CLASS ----------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
@@ -59,7 +61,7 @@ class TaskAbstract;
   It also returns references to signals from their fully-qualified names.
  */
 class SOT_CORE_EXPORT PoolStorage {
-public:
+ public:
   /*! \name Define types to simplify the writing
     @{
    */
@@ -70,7 +72,7 @@ public:
   typedef std::map<std::string, FeatureAbstract *> Features;
   /*! @} */
 
-protected:
+ protected:
   /*! \name Fields of the class to manage the three entities.
     Also the name is singular, those are true sets.
     @{
@@ -83,7 +85,7 @@ protected:
   Features feature;
   /*! @} */
 
-public:
+ public:
   /*! \brief Default destructor */
   ~PoolStorage(void);
 
@@ -117,7 +119,7 @@ public:
   void writeGraph(const std::string &aFileName);
   void writeCompletionList(std::ostream &os);
 
-private:
+ private:
   PoolStorage();
   static PoolStorage *instance_;
 };
diff --git a/include/sot/core/reader.hh b/include/sot/core/reader.hh
index fee84b22..296f69da 100644
--- a/include/sot/core/reader.hh
+++ b/include/sot/core/reader.hh
@@ -30,6 +30,7 @@
 #include <dynamic-graph/signal-base.h>
 #include <dynamic-graph/signal-ptr.h>
 #include <dynamic-graph/signal-time-dependent.h>
+
 #include <sot/core/flags.hh>
 
 /* --------------------------------------------------------------------- */
@@ -58,12 +59,12 @@ using dynamicgraph::sot::Flags;
 class SOTREADER_EXPORT sotReader : public Entity {
   DYNAMIC_GRAPH_ENTITY_DECL();
 
-public:
+ public:
   SignalPtr<Flags, int> selectionSIN;
   SignalTimeDependent<dynamicgraph::Vector, int> vectorSOUT;
   SignalTimeDependent<dynamicgraph::Matrix, int> matrixSOUT;
 
-public:
+ public:
   sotReader(const std::string n);
   virtual ~sotReader(void) {}
 
@@ -71,7 +72,7 @@ public:
   void clear(void);
   void rewind(void);
 
-protected:
+ protected:
   typedef std::list<std::vector<double> > DataType;
   DataType dataSet;
   DataType::const_iterator currentData;
@@ -85,7 +86,7 @@ protected:
                                       const unsigned int time);
   void resize(const int &nbRow, const int &nbCol);
 
-public:
+ public:
   /* --- PARAMS --- */
   void display(std::ostream &os) const;
   virtual void initCommands();
diff --git a/include/sot/core/robot-simu.hh b/include/sot/core/robot-simu.hh
index 50d232d0..bc9bd092 100644
--- a/include/sot/core/robot-simu.hh
+++ b/include/sot/core/robot-simu.hh
@@ -19,11 +19,12 @@
 #include <dynamic-graph/linear-algebra.h>
 
 /* SOT */
-#include "sot/core/api.hh"
-#include "sot/core/device.hh"
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
 
+#include "sot/core/api.hh"
+#include "sot/core/device.hh"
+
 /* --------------------------------------------------------------------- */
 /* --- API ------------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
@@ -46,12 +47,12 @@ namespace sot {
 /* --------------------------------------------------------------------- */
 
 class SOT_ROBOT_SIMU_EXPORT RobotSimu : public Device {
-public:
+ public:
   RobotSimu(const std::string &inName);
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 };
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 #endif /* #ifndef DYNAMICGRAPH_SOT_ROBOT_SIMU_HH */
diff --git a/include/sot/core/robot-utils.hh b/include/sot/core/robot-utils.hh
index 03c7d421..fa256e76 100644
--- a/include/sot/core/robot-utils.hh
+++ b/include/sot/core/robot-utils.hh
@@ -13,16 +13,15 @@
 /* --------------------------------------------------------------------- */
 
 #include <map>
-
 #include <pinocchio/fwd.hpp>
 // keep pinocchio before boost
 
-#include <boost/assign.hpp>
-#include <boost/property_tree/ptree.hpp>
-
 #include <dynamic-graph/linear-algebra.h>
 #include <dynamic-graph/logger.h>
 #include <dynamic-graph/signal-helper.h>
+
+#include <boost/assign.hpp>
+#include <boost/property_tree/ptree.hpp>
 #include <sot/core/matrix-geometry.hh>
 
 namespace dynamicgraph {
@@ -40,15 +39,14 @@ struct SOT_CORE_EXPORT JointLimits {
 typedef Eigen::VectorXd::Index Index;
 
 class SOT_CORE_EXPORT ExtractJointMimics {
-
-public:
+ public:
   /// Constructor
   ExtractJointMimics(std::string &robot_model);
 
   /// Get mimic joints.
   const std::vector<std::string> &get_mimic_joints();
 
-private:
+ private:
   void go_through(boost::property_tree::ptree &pt, int level, int stage);
 
   // Create empty property tree object
@@ -112,7 +110,7 @@ struct SOT_CORE_EXPORT ForceUtil {
 
   void display(std::ostream &out) const;
 
-}; // struct ForceUtil
+};  // struct ForceUtil
 
 struct SOT_CORE_EXPORT FootUtil {
   /// Position of the foot soles w.r.t. the frame of the foot
@@ -133,7 +131,7 @@ struct SOT_CORE_EXPORT HandUtil {
 };
 
 struct SOT_CORE_EXPORT RobotUtil {
-public:
+ public:
   RobotUtil();
 
   /// Forces data
@@ -287,7 +285,7 @@ public:
   /** Access to property tree directly */
   boost::property_tree::ptree &get_property_tree();
 
-protected:
+ protected:
   Logger logger_;
 
   /** \brief Map of the parameters: map of strings. */
@@ -295,7 +293,7 @@ protected:
 
   /** \brief Property tree */
   boost::property_tree::ptree property_tree_;
-}; // struct RobotUtil
+};  // struct RobotUtil
 
 /// Accessors - This should be changed to RobotUtilPtrShared
 typedef std::shared_ptr<RobotUtil> RobotUtilShrPtr;
@@ -308,7 +306,7 @@ std::shared_ptr<std::vector<std::string> > getListOfRobots();
 
 bool base_se3_to_sot(ConstRefVector pos, ConstRefMatrix R, RefVector q_sot);
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // sot_torque_control_common_h_
+#endif  // sot_torque_control_common_h_
diff --git a/include/sot/core/sequencer.hh b/include/sot/core/sequencer.hh
index 0a57cc3c..96599521 100644
--- a/include/sot/core/sequencer.hh
+++ b/include/sot/core/sequencer.hh
@@ -20,6 +20,7 @@
 /* SOT */
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/task-abstract.hh>
 
 /* STD */
@@ -53,17 +54,17 @@ class Sot;
 class SOTSEQUENCER_EXPORT Sequencer : public dynamicgraph::Entity {
   DYNAMIC_GRAPH_ENTITY_DECL();
 
-public:
+ public:
   class sotEventAbstract {
-  public:
+   public:
     enum sotEventType { EVENT_ADD, EVENT_RM, EVENT_CMD };
 
-  protected:
+   protected:
     std::string name;
     void setName(const std::string &name_) { name = name_; }
     int eventType;
 
-  public:
+   public:
     sotEventAbstract(const std::string &name) : name(name){};
     virtual ~sotEventAbstract(void) {}
     virtual const std::string &getName() const { return name; }
@@ -72,7 +73,7 @@ public:
     virtual void display(std::ostream &os) const { os << name; }
   };
 
-protected:
+ protected:
   Sot *sotPtr;
   typedef std::list<sotEventAbstract *> TaskList;
   typedef std::map<unsigned int, TaskList> TaskMap;
@@ -85,26 +86,26 @@ protected:
   std::ostream *outputStreamPtr;
   bool noOutput; /*! if true, display nothing standard output on except errors*/
 
-public: /* --- CONSTRUCTION --- */
+ public: /* --- CONSTRUCTION --- */
   Sequencer(const std::string &name);
   virtual ~Sequencer(void);
 
-public: /* --- TASK MANIP --- */
+ public: /* --- TASK MANIP --- */
   void setSotRef(Sot *sot) { sotPtr = sot; }
   void addTask(sotEventAbstract *task, const unsigned int time);
   void rmTask(int eventType, const std::string &name, const unsigned int time);
   void clearAll();
 
-public: /* --- SIGNAL --- */
+ public: /* --- SIGNAL --- */
   dynamicgraph::SignalTimeDependent<int, int> triggerSOUT;
 
-public: /* --- FUNCTIONS --- */
+ public: /* --- FUNCTIONS --- */
   int &trigger(int &dummy, const int &time);
 
-public: /* --- PARAMS --- */
+ public: /* --- PARAMS --- */
   virtual void display(std::ostream &os) const;
 };
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // #ifndef __SOT_SOTSEQUENCER_H__
+#endif  // #ifndef __SOT_SOTSEQUENCER_H__
diff --git a/include/sot/core/smooth-reach.hh b/include/sot/core/smooth-reach.hh
index 3f64dbc5..327383f9 100644
--- a/include/sot/core/smooth-reach.hh
+++ b/include/sot/core/smooth-reach.hh
@@ -43,11 +43,11 @@ namespace sot {
 /* --------------------------------------------------------------------- */
 
 class SOTSMOOTHREACH_EXPORT SmoothReach : public dynamicgraph::Entity {
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName() const { return CLASS_NAME; }
 
-private:
+ private:
   dynamicgraph::Vector start, goal;
   int startTime, lengthTime;
   bool isStarted, isParam;
@@ -56,15 +56,15 @@ private:
 
   double smoothFunction(double x);
 
-public: /* --- CONSTRUCTION --- */
+ public: /* --- CONSTRUCTION --- */
   SmoothReach(const std::string &name);
   virtual ~SmoothReach(void){};
 
-public: /* --- SIGNAL --- */
+ public: /* --- SIGNAL --- */
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> startSIN;
   dynamicgraph::SignalTimeDependent<dynamicgraph::Vector, int> goalSOUT;
 
-public: /* --- FUNCTION --- */
+ public: /* --- FUNCTION --- */
   dynamicgraph::Vector &goalSOUT_function(dynamicgraph::Vector &goal,
                                           const int &time);
 
@@ -75,7 +75,7 @@ public: /* --- FUNCTION --- */
 
   void setSmoothing(const int &mode, const double &param);
 
-public: /* --- PARAMS --- */
+ public: /* --- PARAMS --- */
   virtual void display(std::ostream &os) const;
   void initCommands(void);
 };
diff --git a/include/sot/core/sot-loader.hh b/include/sot/core/sot-loader.hh
index 135c5ce5..782db395 100644
--- a/include/sot/core/sot-loader.hh
+++ b/include/sot/core/sot-loader.hh
@@ -45,7 +45,7 @@ namespace sot {
  * And then use the oneIteration to execute the graph.
  */
 class SotLoader {
-protected:
+ protected:
   /// \brief Check if the dynamic graph is running or not.
   bool dynamic_graph_stopped_;
 
@@ -72,7 +72,7 @@ protected:
   /// is not responsible for it's life time.
   std::string device_name_;
 
-public:
+ public:
   /// \brief Default constructor.
   SotLoader();
   /// \brief Default destructor.
diff --git a/include/sot/core/sot.hh b/include/sot/core/sot.hh
index 30d3ba0c..349d6521 100644
--- a/include/sot/core/sot.hh
+++ b/include/sot/core/sot.hh
@@ -22,6 +22,7 @@
 
 /* SOT */
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/flags.hh>
 #include <sot/core/task-abstract.hh>
 
@@ -54,18 +55,18 @@ namespace sot {
   through the shell.
 */
 class SOTSOT_CORE_EXPORT Sot : public Entity {
-public:
+ public:
   /*! \brief Specify the name of the class entity. */
   static const std::string CLASS_NAME;
 
-public:
+ public:
   /*! \brief Returns the name of this class. */
   virtual const std::string &getClassName() const { return CLASS_NAME; }
 
   /*! \brief Defines a type for a list of tasks */
   typedef std::list<TaskAbstract *> StackType;
 
-protected:
+ protected:
   /*! \brief This field is a list of controllers
     managed by the stack of tasks. */
   StackType stack;
@@ -86,9 +87,9 @@ protected:
     */
   double maxControlIncrementSquaredNorm;
 
-public:
+ public:
   /*! \brief Threshold to compute the dumped pseudo inverse. */
-  static const double INVERSION_THRESHOLD_DEFAULT; // = 1e-4;
+  static const double INVERSION_THRESHOLD_DEFAULT;  // = 1e-4;
 
   /*   static const double DIRECTIONAL_THRESHOLD_DEFAULT = 1e-2; */
   /*   static const bool USE_CONTI_INVERSE_DEFAULT = false; */
@@ -97,7 +98,7 @@ public:
   static void taskVectorToMlVector(const VectorMultiBound &taskVector,
                                    Vector &err);
 
-public:
+ public:
   /*! \brief Default constructor */
   Sot(const std::string &name);
   ~Sot(void) { /* TODO!! */
@@ -151,7 +152,7 @@ public:
   virtual const unsigned int &getNbDof() const { return nbJoints; }
 
   /*! @} */
-public: /* --- CONTROL --- */
+ public: /* --- CONTROL --- */
   /*! \name Methods to compute the control law following the
     recursive definition of the stack of tasks.
     @{
@@ -163,7 +164,7 @@ public: /* --- CONTROL --- */
 
   /*! @} */
 
-public: /* --- DISPLAY --- */
+ public: /* --- DISPLAY --- */
   /*! \name Methods to display the stack of tasks.
     @{
   */
@@ -173,7 +174,7 @@ public: /* --- DISPLAY --- */
   SOTSOT_CORE_EXPORT friend std::ostream &operator<<(std::ostream &os,
                                                      const Sot &sot);
   /*! @} */
-public: /* --- SIGNALS --- */
+ public: /* --- SIGNALS --- */
   /*! \name Methods to handle signals
     @{
   */
@@ -199,7 +200,7 @@ public: /* --- SIGNALS --- */
    * os. */
   virtual std::ostream &writeGraph(std::ostream &os) const;
 };
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 #endif /* #ifndef __SOT_SOT_HH */
diff --git a/include/sot/core/stop-watch.hh b/include/sot/core/stop-watch.hh
index 3fb95407..ec270e04 100644
--- a/include/sot/core/stop-watch.hh
+++ b/include/sot/core/stop-watch.hh
@@ -39,15 +39,15 @@ WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
 
 // Generic stopwatch exception class
 struct StopwatchException {
-public:
+ public:
   StopwatchException(std::string error) : error(error) {}
   std::string error;
 };
 
 enum StopwatchMode {
-  NONE = 0,     // Clock is not initialized
-  CPU_TIME = 1, // Clock calculates time ranges using ctime and CLOCKS_PER_SEC
-  REAL_TIME = 2 // Clock calculates time by asking the operating system how
+  NONE = 0,      // Clock is not initialized
+  CPU_TIME = 1,  // Clock calculates time ranges using ctime and CLOCKS_PER_SEC
+  REAL_TIME = 2  // Clock calculates time by asking the operating system how
   // much real time passed
 };
 
@@ -145,7 +145,7 @@ enum StopwatchMode {
 
 */
 class Stopwatch {
-public:
+ public:
   /** Constructor */
   Stopwatch(StopwatchMode _mode = NONE);
 
@@ -209,13 +209,17 @@ public:
   /** Take time, depends on mode */
   long double take_time();
 
-protected:
+ protected:
   /** Struct to hold the performance data */
   struct PerformanceData {
-
     PerformanceData()
-        : clock_start(0), total_time(0), min_time(0), max_time(0), last_time(0),
-          paused(false), stops(0) {}
+        : clock_start(0),
+          total_time(0),
+          min_time(0),
+          max_time(0),
+          last_time(0),
+          paused(false),
+          stops(0) {}
 
     /** Start time */
     long double clock_start;
diff --git a/include/sot/core/switch.hh b/include/sot/core/switch.hh
index 804d059e..09864415 100644
--- a/include/sot/core/switch.hh
+++ b/include/sot/core/switch.hh
@@ -22,7 +22,7 @@ template <typename Value, typename Time = int>
 class SOT_CORE_DLLAPI Switch : public VariadicAbstract<Value, Value, Time> {
   DYNAMIC_GRAPH_ENTITY_DECL();
 
-public:
+ public:
   typedef VariadicAbstract<Value, Value, Time> Base;
 
   Switch(const std::string &name)
@@ -36,14 +36,16 @@ public:
     this->SOUT.addDependency(boolSelectionSIN);
 
     using command::makeCommandVoid1;
-    std::string docstring = "\n"
-                            "    Set number of input signals\n";
+    std::string docstring =
+        "\n"
+        "    Set number of input signals\n";
     this->addCommand(
         "setSignalNumber",
         makeCommandVoid1(*(Base *)this, &Base::setSignalNumber, docstring));
 
-    docstring = "\n"
-                "    Get number of input signals\n";
+    docstring =
+        "\n"
+        "    Get number of input signals\n";
     this->addCommand("getSignalNumber",
                      new command::Getter<Base, int>(
                          *this, &Base::getSignalNumber, docstring));
@@ -59,7 +61,7 @@ public:
   SignalPtr<int, Time> selectionSIN;
   SignalPtr<bool, Time> boolSelectionSIN;
 
-private:
+ private:
   Value &signal(Value &ret, const Time &time) {
     int sel;
     if (selectionSIN.isPlugged()) {
@@ -75,6 +77,6 @@ private:
     return ret;
   }
 };
-} // namespace sot
-} // namespace dynamicgraph
-#endif // __SOT_SWITCH_H__
+}  // namespace sot
+}  // namespace dynamicgraph
+#endif  // __SOT_SWITCH_H__
diff --git a/include/sot/core/task-abstract.hh b/include/sot/core/task-abstract.hh
index 248f1ec5..99000b0e 100644
--- a/include/sot/core/task-abstract.hh
+++ b/include/sot/core/task-abstract.hh
@@ -15,18 +15,21 @@
 /* --------------------------------------------------------------------- */
 
 /* Matrix */
-#include <Eigen/SVD>
 #include <dynamic-graph/linear-algebra.h>
 
+#include <Eigen/SVD>
+
 /* STD */
 #include <string>
 
 /* SOT */
-#include "sot/core/api.hh"
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/multi-bound.hh>
 
+#include "sot/core/api.hh"
+
 /* --------------------------------------------------------------------- */
 /* --- CLASS ----------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
@@ -46,17 +49,17 @@ namespace sot {
 /// features that are stored in the task.
 
 class SOT_CORE_EXPORT TaskAbstract : public dynamicgraph::Entity {
-public:
+ public:
   /* Use a derivative of this class to store computational memory. */
   class MemoryTaskAbstract {
-  public:
+   public:
     int timeLastChange;
 
-  public:
+   public:
     MemoryTaskAbstract(void) : timeLastChange(0){};
     virtual ~MemoryTaskAbstract(void){};
 
-  public:
+   public:
     virtual void display(std::ostream &os) const = 0;
     friend std::ostream &operator<<(std::ostream &os,
                                     const MemoryTaskAbstract &tcm) {
@@ -65,16 +68,16 @@ public:
     }
   };
 
-public:
+ public:
   MemoryTaskAbstract *memoryInternal;
 
-protected:
+ protected:
   void taskRegistration(void);
 
-public:
+ public:
   TaskAbstract(const std::string &n);
 
-public: /* --- SIGNALS --- */
+ public: /* --- SIGNALS --- */
   dynamicgraph::SignalTimeDependent<VectorMultiBound, int> taskSOUT;
   dynamicgraph::SignalTimeDependent<dynamicgraph::Matrix, int> jacobianSOUT;
 };
diff --git a/include/sot/core/task-conti.hh b/include/sot/core/task-conti.hh
index 4098ea32..43edcf5a 100644
--- a/include/sot/core/task-conti.hh
+++ b/include/sot/core/task-conti.hh
@@ -21,12 +21,11 @@
 #include <string>
 
 /* SOT */
+#include <sot/core/exception-task.hh>
 #include <sot/core/feature-abstract.hh>
 #include <sot/core/flags.hh>
 #include <sot/core/task.hh>
 
-#include <sot/core/exception-task.hh>
-
 /* --------------------------------------------------------------------- */
 /* --- API ------------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
@@ -49,18 +48,18 @@ namespace dynamicgraph {
 namespace sot {
 
 class SOTTASKCONTI_EXPORT TaskConti : public Task {
-protected:
+ protected:
   enum TimeRefValues { TIME_REF_UNSIGNIFICANT = -1, TIME_REF_TO_BE_SET = -2 };
 
   int timeRef;
   double mu;
   dynamicgraph::Vector q0;
 
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-public:
+ public:
   TaskConti(const std::string &n);
 
   void referenceTime(const unsigned int &t) { timeRef = t; }
@@ -71,7 +70,7 @@ public:
                                                 const int &time);
 
   /* --- SIGNALS ------------------------------------------------------------ */
-public:
+ public:
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> controlPrevSIN;
 
   /* --- DISPLAY ------------------------------------------------------------ */
diff --git a/include/sot/core/task-pd.hh b/include/sot/core/task-pd.hh
index 8c674924..a9ade836 100644
--- a/include/sot/core/task-pd.hh
+++ b/include/sot/core/task-pd.hh
@@ -39,14 +39,14 @@ namespace dynamicgraph {
 namespace sot {
 
 class SOTTASKPD_EXPORT TaskPD : public Task {
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
   dynamicgraph::Vector previousError;
   double beta;
 
-public:
+ public:
   TaskPD(const std::string &n);
 
   /* --- COMPUTATION --- */
@@ -54,7 +54,7 @@ public:
   VectorMultiBound &computeTaskModif(VectorMultiBound &error, int time);
 
   /* --- SIGNALS ------------------------------------------------------------ */
-public:
+ public:
   dynamicgraph::SignalTimeDependent<dynamicgraph::Vector, int> errorDotSOUT;
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> errorDotSIN;
 
diff --git a/include/sot/core/task-unilateral.hh b/include/sot/core/task-unilateral.hh
index 3a704a52..055632c2 100644
--- a/include/sot/core/task-unilateral.hh
+++ b/include/sot/core/task-unilateral.hh
@@ -21,12 +21,11 @@
 #include <string>
 
 /* SOT */
+#include <sot/core/exception-task.hh>
 #include <sot/core/feature-abstract.hh>
 #include <sot/core/flags.hh>
 #include <sot/core/task.hh>
 
-#include <sot/core/exception-task.hh>
-
 /* --------------------------------------------------------------------- */
 /* --- API ------------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
@@ -49,21 +48,21 @@ namespace dynamicgraph {
 namespace sot {
 
 class SOTTASKUNILATERAL_EXPORT TaskUnilateral : public Task {
-protected:
+ protected:
   std::list<FeatureAbstract *> featureList;
 
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-public:
+ public:
   TaskUnilateral(const std::string &n);
 
   /* --- COMPUTATION --- */
   VectorMultiBound &computeTaskUnilateral(VectorMultiBound &res, int time);
 
   /* --- SIGNALS ------------------------------------------------------------ */
-public:
+ public:
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> positionSIN;
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> referenceInfSIN;
   dynamicgraph::SignalPtr<dynamicgraph::Vector, int> referenceSupSIN;
diff --git a/include/sot/core/task.hh b/include/sot/core/task.hh
index 53bbfb9b..8fd4772e 100644
--- a/include/sot/core/task.hh
+++ b/include/sot/core/task.hh
@@ -21,12 +21,11 @@
 #include <string>
 
 /* SOT */
+#include <sot/core/exception-task.hh>
 #include <sot/core/feature-abstract.hh>
 #include <sot/core/flags.hh>
 #include <sot/core/task-abstract.hh>
 
-#include <sot/core/exception-task.hh>
-
 /* --------------------------------------------------------------------- */
 /* --- API ------------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
@@ -71,16 +70,16 @@ namespace dynamicgraph {
 namespace sot {
 
 class SOTTASK_EXPORT Task : public TaskAbstract {
-public:
+ public:
   typedef std::list<FeatureAbstract *> FeatureList_t;
 
-protected:
+ protected:
   FeatureList_t featureList;
   bool withDerivative;
 
   DYNAMIC_GRAPH_ENTITY_DECL();
 
-public:
+ public:
   Task(const std::string &n);
   void initCommands(void);
 
@@ -105,7 +104,7 @@ public:
                                                    int time);
 
   /* --- SIGNALS ------------------------------------------------------------ */
-public:
+ public:
   dynamicgraph::SignalPtr<double, int> controlGainSIN;
   dynamicgraph::SignalPtr<double, int> dampingGainSINOUT;
   dynamicgraph::SignalPtr<Flags, int> controlSelectionSIN;
diff --git a/include/sot/core/time-stamp.hh b/include/sot/core/time-stamp.hh
index ceb6c696..46167159 100644
--- a/include/sot/core/time-stamp.hh
+++ b/include/sot/core/time-stamp.hh
@@ -27,6 +27,7 @@
 /* SOT */
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/debug.hh>
 
 /* --------------------------------------------------------------------- */
@@ -51,23 +52,23 @@ namespace dynamicgraph {
 namespace sot {
 
 class TimeStamp_EXPORT TimeStamp : public dynamicgraph::Entity {
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-protected:
+ protected:
   struct timeval val;
   unsigned int offsetValue;
   bool offsetSet;
 
-public:
+ public:
   /* --- CONSTRUCTION --- */
   TimeStamp(const std::string &name);
 
-public: /* --- DISPLAY --- */
+ public: /* --- DISPLAY --- */
   virtual void display(std::ostream &os) const;
 
-public: /* --- SIGNALS --- */
+ public: /* --- SIGNALS --- */
   /* These signals can be called several time per period, given
    * each time a different results. Useful for chronos. */
   dynamicgraph::Signal<dynamicgraph::Vector, int> timeSOUT;
@@ -78,7 +79,7 @@ public: /* --- SIGNALS --- */
   dynamicgraph::SignalTimeDependent<dynamicgraph::Vector, int> timeOnceSOUT;
   dynamicgraph::SignalTimeDependent<double, int> timeOnceDoubleSOUT;
 
-protected: /* --- SIGNAL FUNCTIONS --- */
+ protected: /* --- SIGNAL FUNCTIONS --- */
   dynamicgraph::Vector &getTimeStamp(dynamicgraph::Vector &res,
                                      const int &time);
   double &getTimeStampDouble(const dynamicgraph::Vector &vect, double &res);
diff --git a/include/sot/core/timer.hh b/include/sot/core/timer.hh
index 0913968e..dd995dee 100644
--- a/include/sot/core/timer.hh
+++ b/include/sot/core/timer.hh
@@ -22,12 +22,14 @@
 // When including Winsock2.h, the MAL must be included first
 #include <Winsock2.h>
 #include <dynamic-graph/linear-algebra.h>
+
 #include <sot/core/utils-windows.hh>
 #endif /*WIN32*/
 
 /* SOT */
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/debug.hh>
 
 /* --------------------------------------------------------------------- */
@@ -48,21 +50,22 @@
 /* --- CLASS ----------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 
-template <class T> class Timer_EXPORT Timer : public dynamicgraph::Entity {
-public:
+template <class T>
+class Timer_EXPORT Timer : public dynamicgraph::Entity {
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-protected:
+ protected:
   struct timeval t0, t1;
   clock_t c0, c1;
   double dt;
 
-public:
+ public:
   /* --- CONSTRUCTION --- */
   Timer(const std::string &name);
 
-public: /* --- DISPLAY --- */
+ public: /* --- DISPLAY --- */
   virtual void display(std::ostream &os) const;
   Timer_EXPORT friend std::ostream &operator<<(std::ostream &os,
                                                const Timer<T> &timer) {
@@ -70,19 +73,20 @@ public: /* --- DISPLAY --- */
     return os;
   }
 
-public: /* --- SIGNALS --- */
+ public: /* --- SIGNALS --- */
   dynamicgraph::SignalPtr<T, int> sigSIN;
   dynamicgraph::SignalTimeDependent<T, int> sigSOUT;
   dynamicgraph::SignalTimeDependent<T, int> sigClockSOUT;
   dynamicgraph::Signal<double, int> timerSOUT;
 
-protected: /* --- SIGNAL FUNCTIONS --- */
+ protected: /* --- SIGNAL FUNCTIONS --- */
   void plug(dynamicgraph::Signal<T, int> &sig) {
     sigSIN = &sig;
     dt = 0.;
   }
 
-  template <bool UseClock> T &compute(T &t, const int &time) {
+  template <bool UseClock>
+  T &compute(T &t, const int &time) {
     sotDEBUGIN(15);
     if (UseClock) {
       c0 = clock();
@@ -131,7 +135,9 @@ void cmdChrono(const std::string &cmd, std::istringstream &args,
 /* --- CONSTRUCTION ---------------------------------------------------- */
 template <class T>
 Timer<T>::Timer(const std::string &name)
-    : Entity(name), dt(0.), sigSIN(NULL, "Timer(" + name + ")::input(T)::sin"),
+    : Entity(name),
+      dt(0.),
+      sigSIN(NULL, "Timer(" + name + ")::input(T)::sin"),
       sigSOUT(boost::bind(&Timer::compute<false>, this, _1, _2), sigSIN,
               "Timer(" + name + ")::output(T)::sout"),
       sigClockSOUT(boost::bind(&Timer::compute<true>, this, _1, _2), sigSIN,
@@ -145,7 +151,8 @@ Timer<T>::Timer(const std::string &name)
 }
 
 /* --- DISPLAY --------------------------------------------------------- */
-template <class T> void Timer<T>::display(std::ostream &os) const {
+template <class T>
+void Timer<T>::display(std::ostream &os) const {
   os << "Timer <" << sigSIN << "> : " << dt << "ms." << std::endl;
 }
 
diff --git a/include/sot/core/trajectory.hh b/include/sot/core/trajectory.hh
index b5bb1e4f..f1edeea5 100644
--- a/include/sot/core/trajectory.hh
+++ b/include/sot/core/trajectory.hh
@@ -11,13 +11,12 @@
 
 // Matrix
 #include <dynamic-graph/linear-algebra.h>
-#include <sot/core/api.hh>
+#include <dynamic-graph/signal-caster.h>
 
 #include <boost/array.hpp>
 #include <boost/assign/list_of.hpp>
 #include <boost/regex.hpp>
-
-#include <dynamic-graph/signal-caster.h>
+#include <sot/core/api.hh>
 
 namespace dg = dynamicgraph;
 namespace ba = boost::assign;
@@ -28,10 +27,10 @@ namespace sot {
 class Trajectory;
 
 class RulesJointTrajectory {
-protected:
+ protected:
   Trajectory &TrajectoryToFill_;
 
-public:
+ public:
   unsigned int dbg_level;
 
   /// \brief Strings specifying the grammar of the structure.
@@ -51,13 +50,13 @@ public:
   /// \brief parse_string will fill TrajectoryToFill with string atext.
   void parse_string(std::string &atext);
 
-protected:
+ protected:
   /// \brief General parsing method of text with regexp e. The results are given
   /// in what. The remaining text is left in sub_text.
-  bool
-  search_exp_sub_string(std::string &text,
-                        boost::match_results<std::string::const_iterator> &what,
-                        boost::regex &e, std::string &sub_text);
+  bool search_exp_sub_string(
+      std::string &text,
+      boost::match_results<std::string::const_iterator> &what, boost::regex &e,
+      std::string &sub_text);
   /// \brief Find and store the header.
   /// This method is looking for:
   /// unsigned int seq.
@@ -83,7 +82,7 @@ protected:
 };
 
 class SOT_CORE_EXPORT timestamp {
-public:
+ public:
   unsigned long int secs_;
   unsigned long int nsecs_;
   timestamp() : secs_(0), nsecs_(0) {}
@@ -96,8 +95,7 @@ public:
     nsecs_ = lnsecs;
   }
   bool operator==(const timestamp &other) const {
-    if ((secs_ != other.secs_) || (nsecs_ != other.nsecs_))
-      return false;
+    if ((secs_ != other.secs_) || (nsecs_ != other.nsecs_)) return false;
     return true;
   }
   friend std::ostream &operator<<(std::ostream &stream, const timestamp &ats) {
@@ -107,7 +105,7 @@ public:
 };
 
 class SOT_CORE_EXPORT Header {
-public:
+ public:
   unsigned int seq_;
   timestamp stamp_;
   std::string frame_id_;
@@ -115,8 +113,7 @@ public:
 };
 
 class SOT_CORE_EXPORT JointTrajectoryPoint {
-
-public:
+ public:
   std::vector<double> positions_;
   std::vector<double> velocities_;
   std::vector<double> accelerations_;
@@ -132,20 +129,20 @@ public:
 
     for (std::size_t arrayId = 0; arrayId < names.size(); ++arrayId) {
       switch (arrayId) {
-      case (0):
-        points = &positions_;
-        break;
-      case (1):
-        points = &velocities_;
-        break;
-      case (2):
-        points = &accelerations_;
-        break;
-      case (3):
-        points = &efforts_;
-        break;
-      default:
-        assert(0);
+        case (0):
+          points = &positions_;
+          break;
+        case (1):
+          points = &velocities_;
+          break;
+        case (2):
+          points = &accelerations_;
+          break;
+        case (3):
+          points = &efforts_;
+          break;
+        default:
+          assert(0);
       }
 
       std::vector<double>::const_iterator it_db;
@@ -158,27 +155,26 @@ public:
 
   void transfer(const std::vector<double> &src, unsigned int vecId) {
     switch (vecId) {
-    case (0):
-      positions_ = src;
-      break;
-    case (1):
-      velocities_ = src;
-      break;
-    case (2):
-      accelerations_ = src;
-      break;
-    case (3):
-      efforts_ = src;
-      break;
-    default:
-      assert(0);
+      case (0):
+        positions_ = src;
+        break;
+      case (1):
+        velocities_ = src;
+        break;
+      case (2):
+        accelerations_ = src;
+        break;
+      case (3):
+        efforts_ = src;
+        break;
+      default:
+        assert(0);
     }
   }
 };
 
 class SOT_CORE_EXPORT Trajectory {
-
-public:
+ public:
   Trajectory();
   Trajectory(const Trajectory &copy);
   virtual ~Trajectory();
@@ -193,11 +189,11 @@ public:
   int deserialize(std::istringstream &is);
   void display(std::ostream &) const;
 };
-} // namespace sot
+}  // namespace sot
 
 template <>
 struct signal_io<sot::Trajectory> : signal_io_unimplemented<sot::Trajectory> {};
 
-} // namespace dynamicgraph
+}  // namespace dynamicgraph
 
 #endif /* #ifndef SOT_TRAJECTORY_H__ */
diff --git a/include/sot/core/unary-op.hh b/include/sot/core/unary-op.hh
index 650a5c94..a43ab908 100644
--- a/include/sot/core/unary-op.hh
+++ b/include/sot/core/unary-op.hh
@@ -25,13 +25,14 @@
 namespace dynamicgraph {
 namespace sot {
 
-template <typename Operator> class UnaryOp : public Entity {
+template <typename Operator>
+class UnaryOp : public Entity {
   Operator op;
   typedef typename Operator::Tin Tin;
   typedef typename Operator::Tout Tout;
   typedef UnaryOp<Operator> Self;
 
-public: /* --- CONSTRUCTION --- */
+ public: /* --- CONSTRUCTION --- */
   static std::string getTypeInName(void) { return Operator::nameTypeIn(); }
   static std::string getTypeOutName(void) { return Operator::nameTypeOut(); }
   static const std::string CLASS_NAME;
@@ -41,8 +42,9 @@ public: /* --- CONSTRUCTION --- */
   std::string getDocString() const { return op.getDocString(); }
 
   UnaryOp(const std::string &name)
-      : Entity(name), SIN(NULL, Self::CLASS_NAME + "(" + name + ")::input(" +
-                                    Self::getTypeInName() + ")::sin"),
+      : Entity(name),
+        SIN(NULL, Self::CLASS_NAME + "(" + name + ")::input(" +
+                      Self::getTypeInName() + ")::sin"),
         SOUT(boost::bind(&Self::computeOperation, this, _1, _2), SIN,
              Self::CLASS_NAME + "(" + name + ")::output(" +
                  Self::getTypeOutName() + ")::sout") {
@@ -52,20 +54,20 @@ public: /* --- CONSTRUCTION --- */
 
   virtual ~UnaryOp(void){};
 
-public: /* --- SIGNAL --- */
+ public: /* --- SIGNAL --- */
   SignalPtr<Tin, int> SIN;
   SignalTimeDependent<Tout, int> SOUT;
 
-protected:
+ protected:
   Tout &computeOperation(Tout &res, int time) {
     const Tin &x1 = SIN(time);
     op(x1, res);
     return res;
   }
 
-public: /* --- PARAMS --- */
+ public: /* --- PARAMS --- */
 };
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef SOT_CORE_UNARYOP_HH
+#endif  // #ifndef SOT_CORE_UNARYOP_HH
diff --git a/include/sot/core/utils-windows.hh b/include/sot/core/utils-windows.hh
index c891b9a8..67364453 100644
--- a/include/sot/core/utils-windows.hh
+++ b/include/sot/core/utils-windows.hh
@@ -12,9 +12,9 @@
 
 #ifdef WIN32
 
-#include "sot/core/api.hh"
-
 #include < time.h >
+
+#include "sot/core/api.hh"
 #define NOMINMAX
 #include <Winsock2.h>
 
diff --git a/include/sot/core/variadic-op.hh b/include/sot/core/variadic-op.hh
index c03018f5..034660e7 100644
--- a/include/sot/core/variadic-op.hh
+++ b/include/sot/core/variadic-op.hh
@@ -19,14 +19,14 @@
 /* SOT */
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/flags.hh>
 #include <sot/core/matrix-geometry.hh>
 #include <sot/core/pool.hh>
 
 /* STD */
-#include <string>
-
 #include <boost/function.hpp>
+#include <string>
 
 namespace dynamicgraph {
 namespace sot {
@@ -37,13 +37,14 @@ namespace sot {
 
 template <typename Tin, typename Tout, typename Time>
 class VariadicAbstract : public Entity {
-public: /* --- CONSTRUCTION --- */
+ public: /* --- CONSTRUCTION --- */
   static std::string getTypeInName(void);
   static std::string getTypeOutName(void);
 
   VariadicAbstract(const std::string &name, const std::string &className)
-      : Entity(name), SOUT(className + "(" + name + ")::output(" +
-                           getTypeOutName() + ")::sout"),
+      : Entity(name),
+        SOUT(className + "(" + name + ")::output(" + getTypeOutName() +
+             ")::sout"),
         baseSigname(className + "(" + name + ")::input(" + getTypeInName() +
                     ")::") {
     signalRegistration(SOUT);
@@ -55,7 +56,7 @@ public: /* --- CONSTRUCTION --- */
     }
   };
 
-public: /* --- SIGNAL --- */
+ public: /* --- SIGNAL --- */
   typedef SignalPtr<Tin, int> signal_t;
   SignalTimeDependent<Tout, int> SOUT;
 
@@ -88,8 +89,7 @@ public: /* --- SIGNAL --- */
   void setSignalNumber(const int &n) {
     assert(n >= 0);
     const std::size_t oldSize = signalsIN.size();
-    for (std::size_t i = n; i < oldSize; ++i)
-      _removeSignal(i);
+    for (std::size_t i = n; i < oldSize; ++i) _removeSignal(i);
     signalsIN.resize(n, NULL);
     // names.resize(n);
 
@@ -114,14 +114,14 @@ public: /* --- SIGNAL --- */
     return signalsIN[i];
   }
 
-protected:
+ protected:
   std::vector<signal_t *> signalsIN;
   // Use signal->shortName instead
   // std::vector< std::string > names;
 
   virtual void updateSignalNumber(int n) { (void)n; };
 
-private:
+ private:
   void _removeSignal(const std::size_t i) {
     // signalDeregistration(names[i]);
     signalDeregistration(signalsIN[i]->shortName());
@@ -142,7 +142,7 @@ class VariadicOp : public VariadicAbstract<typename Operator::Tin,
   typedef typename Operator::Tout Tout;
   typedef VariadicOp<Operator> Self;
 
-public: /* --- CONSTRUCTION --- */
+ public: /* --- CONSTRUCTION --- */
   Operator op;
 
   typedef VariadicAbstract<Tin, Tout, int> Base;
@@ -161,7 +161,7 @@ public: /* --- CONSTRUCTION --- */
 
   virtual ~VariadicOp(void){};
 
-protected:
+ protected:
   Tout &computeOperation(Tout &res, int time) {
     std::vector<const Tin *> in(this->signalsIN.size());
     for (std::size_t i = 0; i < this->signalsIN.size(); ++i) {
@@ -174,7 +174,7 @@ protected:
 
   inline void updateSignalNumber(int n) { op.updateSignalNumber(n); }
 };
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // #ifndef SOT_CORE_VARIADICOP_HH
+#endif  // #ifndef SOT_CORE_VARIADICOP_HH
diff --git a/include/sot/core/vector-constant.hh b/include/sot/core/vector-constant.hh
index 82506e4b..b78297bd 100644
--- a/include/sot/core/vector-constant.hh
+++ b/include/sot/core/vector-constant.hh
@@ -10,9 +10,8 @@
 #ifndef DYNAMICGRAPH_SOT_VECTOR_CONSTANT_H
 #define DYNAMICGRAPH_SOT_VECTOR_CONSTANT_H
 
-#include <dynamic-graph/entity.h>
-
 #include <dynamic-graph/all-signals.h>
+#include <dynamic-graph/entity.h>
 
 /* Matrix */
 #include <dynamic-graph/linear-algebra.h>
@@ -27,13 +26,13 @@ namespace command {
 namespace vectorConstant {
 class Resize;
 }
-} // namespace command
+}  // namespace command
 
 class VectorConstant : public Entity {
   friend class command::vectorConstant::Resize;
   int rows;
 
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
@@ -47,7 +46,7 @@ public:
   void setValue(const dynamicgraph::Vector &inValue);
 };
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // DYNAMICGRAPH_SOT_VECTOR_CONSTANT_H
+#endif  // DYNAMICGRAPH_SOT_VECTOR_CONSTANT_H
diff --git a/include/sot/core/vector-to-rotation.hh b/include/sot/core/vector-to-rotation.hh
index d68bc540..95756e2e 100644
--- a/include/sot/core/vector-to-rotation.hh
+++ b/include/sot/core/vector-to-rotation.hh
@@ -12,6 +12,7 @@
 
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/matrix-geometry.hh>
 
 /* Matrix */
@@ -40,14 +41,15 @@
 namespace dynamicgraph {
 namespace sot {
 
-class[[deprecated("use RPYToMatrix")]] SOTVECTORTOROTATION_EXPORT
-    VectorToRotation : public dynamicgraph::Entity {
+class [[deprecated(
+    "use RPYToMatrix")]] SOTVECTORTOROTATION_EXPORT VectorToRotation
+    : public dynamicgraph::Entity {
   enum sotAxis { AXIS_X, AXIS_Y, AXIS_Z };
 
   unsigned int size;
   std::vector<sotAxis> axes;
 
-public:
+ public:
   static const std::string CLASS_NAME;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
@@ -65,4 +67,4 @@ public:
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // #ifndef __SOTVECTORTOMATRIX_HH
+#endif  // #ifndef __SOTVECTORTOMATRIX_HH
diff --git a/include/sot/core/visual-point-projecter.hh b/include/sot/core/visual-point-projecter.hh
index 98659a73..4d0ddd99 100644
--- a/include/sot/core/visual-point-projecter.hh
+++ b/include/sot/core/visual-point-projecter.hh
@@ -42,16 +42,15 @@ namespace sot {
 class SOTVISUALPOINTPROJECTER_EXPORT VisualPointProjecter
     : public ::dynamicgraph::Entity,
       public ::dynamicgraph::EntityHelper<VisualPointProjecter> {
-
-public: /* --- CONSTRUCTOR ---- */
+ public: /* --- CONSTRUCTOR ---- */
   VisualPointProjecter(const std::string &name);
 
-public: /* --- ENTITY INHERITANCE --- */
+ public: /* --- ENTITY INHERITANCE --- */
   static const std::string CLASS_NAME;
   virtual void display(std::ostream &os) const;
   virtual const std::string &getClassName(void) const { return CLASS_NAME; }
 
-public: /* --- SIGNALS --- */
+ public: /* --- SIGNALS --- */
   DECLARE_SIGNAL_IN(point3D, dynamicgraph::Vector);
   DECLARE_SIGNAL_IN(transfo, MatrixHomogeneous);
 
@@ -59,9 +58,9 @@ public: /* --- SIGNALS --- */
   DECLARE_SIGNAL_OUT(depth, double);
   DECLARE_SIGNAL_OUT(point2D, dynamicgraph::Vector);
 
-}; // class VisualPointProjecter
+};  // class VisualPointProjecter
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // #ifndef __sot_core_VisualPointProjecter_H__
+#endif  // #ifndef __sot_core_VisualPointProjecter_H__
diff --git a/src/control/admittance-control-op-point.cpp b/src/control/admittance-control-op-point.cpp
index 7cabe9ac..5b0b01d7 100644
--- a/src/control/admittance-control-op-point.cpp
+++ b/src/control/admittance-control-op-point.cpp
@@ -9,8 +9,10 @@
  */
 
 #include "sot/core/admittance-control-op-point.hh"
+
 #include <dynamic-graph/all-commands.h>
 #include <dynamic-graph/factory.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/stop-watch.hh>
 
@@ -22,17 +24,17 @@ using namespace dg;
 using namespace pinocchio;
 using namespace dg::command;
 
-#define PROFILE_ADMITTANCECONTROLOPPOINT_WFORCE_COMPUTATION                    \
+#define PROFILE_ADMITTANCECONTROLOPPOINT_WFORCE_COMPUTATION \
   "AdmittanceControlOpPoint: w_force computation   "
 
-#define PROFILE_ADMITTANCECONTROLOPPOINT_WDQ_COMPUTATION                       \
+#define PROFILE_ADMITTANCECONTROLOPPOINT_WDQ_COMPUTATION \
   "AdmittanceControlOpPoint: w_dq computation      "
 
-#define PROFILE_ADMITTANCECONTROLOPPOINT_DQ_COMPUTATION                        \
+#define PROFILE_ADMITTANCECONTROLOPPOINT_DQ_COMPUTATION \
   "AdmittanceControlOpPoint: dq computation        "
 
-#define INPUT_SIGNALS                                                          \
-  m_KpSIN << m_KdSIN << m_dqSaturationSIN << m_forceSIN << m_w_forceDesSIN     \
+#define INPUT_SIGNALS                                                      \
+  m_KpSIN << m_KdSIN << m_dqSaturationSIN << m_forceSIN << m_w_forceDesSIN \
           << m_opPoseSIN << m_sensorPoseSIN
 
 #define INNER_SIGNALS m_w_forceSINNER << m_w_dqSINNER
@@ -51,7 +53,8 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(AdmittanceControlOpPoint,
 /* --- CONSTRUCTION -------------------------------------------------- */
 /* ------------------------------------------------------------------- */
 AdmittanceControlOpPoint::AdmittanceControlOpPoint(const std::string &name)
-    : Entity(name), CONSTRUCT_SIGNAL_IN(Kp, dynamicgraph::Vector),
+    : Entity(name),
+      CONSTRUCT_SIGNAL_IN(Kp, dynamicgraph::Vector),
       CONSTRUCT_SIGNAL_IN(Kd, dynamicgraph::Vector),
       CONSTRUCT_SIGNAL_IN(dqSaturation, dynamicgraph::Vector),
       CONSTRUCT_SIGNAL_IN(force, dynamicgraph::Vector),
@@ -114,8 +117,7 @@ DEFINE_SIGNAL_INNER_FUNCTION(w_force, dynamicgraph::Vector) {
         "Cannot compute signal w_force before initialization!");
     return s;
   }
-  if (s.size() != 6)
-    s.resize(6);
+  if (s.size() != 6) s.resize(6);
 
   getProfiler().start(PROFILE_ADMITTANCECONTROLOPPOINT_WFORCE_COMPUTATION);
 
@@ -123,7 +125,7 @@ DEFINE_SIGNAL_INNER_FUNCTION(w_force, dynamicgraph::Vector) {
   const MatrixHomogeneous &sensorPose = m_sensorPoseSIN(iter);
   assert(force.size() == m_n && "Unexpected size of signal force");
   pinocchio::SE3 sensorPlacement(
-      sensorPose.matrix()); // homogeneous matrix to SE3
+      sensorPose.matrix());  // homogeneous matrix to SE3
   s = sensorPlacement.act(pinocchio::Force(force)).toVector();
 
   getProfiler().stop(PROFILE_ADMITTANCECONTROLOPPOINT_WFORCE_COMPUTATION);
@@ -137,8 +139,7 @@ DEFINE_SIGNAL_INNER_FUNCTION(w_dq, dynamicgraph::Vector) {
         "Cannot compute signal w_dq before initialization!");
     return s;
   }
-  if (s.size() != 6)
-    s.resize(6);
+  if (s.size() != 6) s.resize(6);
 
   getProfiler().start(PROFILE_ADMITTANCECONTROLOPPOINT_WDQ_COMPUTATION);
 
@@ -158,10 +159,8 @@ DEFINE_SIGNAL_INNER_FUNCTION(w_dq, dynamicgraph::Vector) {
            Kd.cwiseProduct(m_w_dq);
 
   for (int i = 0; i < m_n; i++) {
-    if (m_w_dq[i] > dqSaturation[i])
-      m_w_dq[i] = dqSaturation[i];
-    if (m_w_dq[i] < -dqSaturation[i])
-      m_w_dq[i] = -dqSaturation[i];
+    if (m_w_dq[i] > dqSaturation[i]) m_w_dq[i] = dqSaturation[i];
+    if (m_w_dq[i] < -dqSaturation[i]) m_w_dq[i] = -dqSaturation[i];
   }
 
   s = m_w_dq;
@@ -176,15 +175,15 @@ DEFINE_SIGNAL_OUT_FUNCTION(dq, dynamicgraph::Vector) {
     SEND_WARNING_STREAM_MSG("Cannot compute signal dq before initialization!");
     return s;
   }
-  if (s.size() != 6)
-    s.resize(6);
+  if (s.size() != 6) s.resize(6);
 
   getProfiler().start(PROFILE_ADMITTANCECONTROLOPPOINT_DQ_COMPUTATION);
 
   const Vector &w_dq = m_w_dqSINNER(iter);
   const MatrixHomogeneous &opPose = m_opPoseSIN(iter);
   assert(w_dq.size() == m_n && "Unexpected size of signal w_dq");
-  pinocchio::SE3 opPointPlacement(opPose.matrix()); // homogeneous matrix to SE3
+  pinocchio::SE3 opPointPlacement(
+      opPose.matrix());  // homogeneous matrix to SE3
   s = opPointPlacement.actInv(pinocchio::Motion(w_dq)).toVector();
 
   getProfiler().stop(PROFILE_ADMITTANCECONTROLOPPOINT_DQ_COMPUTATION);
@@ -204,6 +203,6 @@ void AdmittanceControlOpPoint::display(std::ostream &os) const {
   } catch (ExceptionSignal e) {
   }
 }
-} // namespace core
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace core
+}  // namespace sot
+}  // namespace dynamicgraph
diff --git a/src/control/control-gr.cpp b/src/control/control-gr.cpp
index dbb7a1e5..2f757cc6 100644
--- a/src/control/control-gr.cpp
+++ b/src/control/control-gr.cpp
@@ -11,7 +11,7 @@
 
 #include <sot/core/debug.hh>
 class ControlGR__INIT {
-public:
+ public:
   ControlGR__INIT(void) { dynamicgraph::sot::DebugTrace::openFile(); }
 };
 ControlGR__INIT ControlGR_initiator;
@@ -19,6 +19,7 @@ ControlGR__INIT ControlGR_initiator;
 /* --------------------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 #include <dynamic-graph/factory.h>
+
 #include <sot/core/binary-op.hh>
 #include <sot/core/control-gr.hh>
 
@@ -36,7 +37,8 @@ const double ControlGR::TIME_STEP_DEFAULT = .001;
 #define __SOT_ControlGR_INIT
 
 ControlGR::ControlGR(const std::string &name)
-    : Entity(name), TimeStep(0),
+    : Entity(name),
+      TimeStep(0),
       matrixASIN(NULL, "ControlGR(" + name + ")::input(matrix)::matrixA"),
       accelerationSIN(NULL,
                       "ControlGR(" + name + ")::input(vector)::acceleration"),
diff --git a/src/control/control-pd.cpp b/src/control/control-pd.cpp
index eb57a6b7..13132ff8 100644
--- a/src/control/control-pd.cpp
+++ b/src/control/control-pd.cpp
@@ -14,6 +14,7 @@
 /* --------------------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 #include <dynamic-graph/factory.h>
+
 #include <sot/core/debug.hh>
 
 using namespace dynamicgraph::sot;
@@ -30,15 +31,16 @@ const double ControlPD::TIME_STEP_DEFAULT = .001;
 #define __SOT_ControlPD_INIT
 
 ControlPD::ControlPD(const std::string &name)
-    : Entity(name), TimeStep(0),
+    : Entity(name),
+      TimeStep(0),
       KpSIN(NULL, "ControlPD(" + name + ")::input(vector)::Kp"),
       KdSIN(NULL, "ControlPD(" + name + ")::input(vector)::Kd"),
       positionSIN(NULL, "ControlPD(" + name + ")::input(vector)::position"),
-      desiredpositionSIN(NULL, "ControlPD(" + name +
-                                   ")::input(vector)::desired_position"),
+      desiredpositionSIN(
+          NULL, "ControlPD(" + name + ")::input(vector)::desired_position"),
       velocitySIN(NULL, "ControlPD(" + name + ")::input(vector)::velocity"),
-      desiredvelocitySIN(NULL, "ControlPD(" + name +
-                                   ")::input(vector)::desired_velocity"),
+      desiredvelocitySIN(
+          NULL, "ControlPD(" + name + ")::input(vector)::desired_velocity"),
       controlSOUT(boost::bind(&ControlPD::computeControl, this, _1, _2),
                   KpSIN << KdSIN << positionSIN << desiredpositionSIN
                         << velocitySIN << desiredvelocitySIN,
@@ -104,16 +106,16 @@ dynamicgraph::Vector &ControlPD::computeControl(dynamicgraph::Vector &tau,
   return tau;
 }
 
-dynamicgraph::Vector &
-ControlPD::getPositionError(dynamicgraph::Vector &position_error, int t) {
+dynamicgraph::Vector &ControlPD::getPositionError(
+    dynamicgraph::Vector &position_error, int t) {
   // sotDEBUGOUT(15) ??
   controlSOUT(t);
   position_error = position_error_;
   return position_error;
 }
 
-dynamicgraph::Vector &
-ControlPD::getVelocityError(dynamicgraph::Vector &velocity_error, int t) {
+dynamicgraph::Vector &ControlPD::getVelocityError(
+    dynamicgraph::Vector &velocity_error, int t) {
   controlSOUT(t);
   velocity_error = velocity_error_;
   return velocity_error;
diff --git a/src/debug/contiifstream.cpp b/src/debug/contiifstream.cpp
index eff881b5..3774a84f 100644
--- a/src/debug/contiifstream.cpp
+++ b/src/debug/contiifstream.cpp
@@ -31,11 +31,10 @@ bool Contiifstream::loop(void) {
     if (file.gcount()) {
       res = true;
       std::string line(buffer);
-      if (!first)
-        reader.push_back(line);
+      if (!first) reader.push_back(line);
       cursor = file.tellg();
       cursor++;
-      file.get(*buffer); // get the last char ( = '\n')
+      file.get(*buffer);  // get the last char ( = '\n')
       sotDEBUG(15) << "line: " << line << std::endl;
     } else {
       break;
diff --git a/src/debug/debug.cpp b/src/debug/debug.cpp
index 22f3486b..c6e44bc1 100644
--- a/src/debug/debug.cpp
+++ b/src/debug/debug.cpp
@@ -17,43 +17,41 @@ namespace dynamicgraph {
 namespace sot {
 #ifdef WIN32
 const char *DebugTrace::DEBUG_FILENAME_DEFAULT = "c:/tmp/sot-core-traces.txt";
-#else  // WIN32
+#else   // WIN32
 const char *DebugTrace::DEBUG_FILENAME_DEFAULT = "/tmp/sot-core-traces.txt";
-#endif // WIN32
+#endif  // WIN32
 
 #ifdef VP_DEBUG
 #ifdef WIN32
 std::ofstream debugfile("C:/tmp/sot-core-traces.txt",
                         std::ios::trunc &std::ios::out);
-#else  // WIN32
+#else   // WIN32
 std::ofstream debugfile("/tmp/sot-core-traces.txt",
                         std::ios::trunc &std::ios::out);
-#endif // WIN32
-#else  // VP_DEBUG
+#endif  // WIN32
+#else   // VP_DEBUG
 
 std::ofstream debugfile;
 
 class __sotDebug_init {
-public:
+ public:
   __sotDebug_init() { debugfile.setstate(std::ios::failbit); }
 };
 __sotDebug_init __sotDebug_initialisator;
 
-#endif // VP_DEBUG
+#endif  // VP_DEBUG
 
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
 void DebugTrace::openFile(const char *filename) {
-  if (debugfile.good() && debugfile.is_open())
-    debugfile.close();
+  if (debugfile.good() && debugfile.is_open()) debugfile.close();
   debugfile.clear();
   debugfile.open(filename, std::ios::trunc & std::ios::out);
 }
 
 void DebugTrace::closeFile(const char *) {
-  if (debugfile.good() && debugfile.is_open())
-    debugfile.close();
+  if (debugfile.good() && debugfile.is_open()) debugfile.close();
   debugfile.setstate(std::ios::failbit);
 }
 
@@ -61,5 +59,5 @@ namespace dynamicgraph {
 namespace sot {
 DebugTrace sotDEBUGFLOW(debugfile);
 DebugTrace sotERRORFLOW(debugfile);
-} // namespace sot.
-} // namespace dynamicgraph
+}  // namespace sot.
+}  // namespace dynamicgraph
diff --git a/src/dynamic_graph/__init__.py b/src/dynamic_graph/__init__.py
index 69e3be50..8db66d3d 100644
--- a/src/dynamic_graph/__init__.py
+++ b/src/dynamic_graph/__init__.py
@@ -1 +1 @@
-__path__ = __import__('pkgutil').extend_path(__path__, __name__)
+__path__ = __import__("pkgutil").extend_path(__path__, __name__)
diff --git a/src/dynamic_graph/sot/core/feature_position.py b/src/dynamic_graph/sot/core/feature_position.py
index 36d6bbab..3cc632e9 100644
--- a/src/dynamic_graph/sot/core/feature_position.py
+++ b/src/dynamic_graph/sot/core/feature_position.py
@@ -28,35 +28,37 @@ class FeaturePosition(Entity):
 
     signalMap = dict()
 
-    def __init__(self, name, signalPosition=None, signalJacobian=None, referencePosition=None):
+    def __init__(
+        self, name, signalPosition=None, signalJacobian=None, referencePosition=None
+    ):
         self._feature = FeaturePoint6d(name)
         self.obj = self._feature.obj
-        self._reference = FeaturePoint6d(name + '_ref')
+        self._reference = FeaturePoint6d(name + "_ref")
         if referencePosition:
-            self._reference.signal('position').value = tuple(referencePosition)
+            self._reference.signal("position").value = tuple(referencePosition)
         if signalPosition:
-            plug(signalPosition, self._feature.signal('position'))
+            plug(signalPosition, self._feature.signal("position"))
         if signalJacobian:
-            plug(signalJacobian, self._feature.signal('Jq'))
+            plug(signalJacobian, self._feature.signal("Jq"))
         self._feature.setReference(self._reference.name)
-        self._feature.signal('selec').value = Flags('111111')
-        self._feature.frame('current')
+        self._feature.signal("selec").value = Flags("111111")
+        self._feature.frame("current")
 
         # Signals stored in members
-        self.position = self._feature.signal('position')
-        self.reference = self._reference.signal('position')
-        self.velocity = self._reference.signal('velocity')
-        self.Jq = self._feature.signal('Jq')
-        self.error = self._feature.signal('error')
-        self.errordot = self._feature.signal('errordot')
-        self.selec = self._feature.signal('selec')
+        self.position = self._feature.signal("position")
+        self.reference = self._reference.signal("position")
+        self.velocity = self._reference.signal("velocity")
+        self.Jq = self._feature.signal("Jq")
+        self.error = self._feature.signal("error")
+        self.errordot = self._feature.signal("errordot")
+        self.selec = self._feature.signal("selec")
 
         self.signalMap = {
-            'position': self.position,
-            'reference': self.reference,
-            'Jq': self.Jq,
-            'error': self.error,
-            'selec': self.selec
+            "position": self.position,
+            "reference": self.reference,
+            "Jq": self.Jq,
+            "error": self.error,
+            "selec": self.selec,
         }
 
     @property
@@ -70,7 +72,7 @@ class FeaturePosition(Entity):
         if name in self.signalMap.keys():
             return self.signalMap[name]
         else:
-            raise RuntimeError('No signal with this name')
+            raise RuntimeError("No signal with this name")
 
     def signals(self):
         """
@@ -82,7 +84,7 @@ class FeaturePosition(Entity):
         """
         Return the list of commands.
         """
-        return ('frame', 'getFrame', 'keep')
+        return ("frame", "getFrame", "keep")
 
     def frame(self, f):
         return self._feature.frame(f)
diff --git a/src/dynamic_graph/sot/core/feature_position_relative.py b/src/dynamic_graph/sot/core/feature_position_relative.py
index 3f77612e..04bb37ff 100644
--- a/src/dynamic_graph/sot/core/feature_position_relative.py
+++ b/src/dynamic_graph/sot/core/feature_position_relative.py
@@ -11,7 +11,7 @@ from dynamic_graph.sot.core import Flags
 from dynamic_graph.sot.core.feature_point6d_relative import FeaturePoint6dRelative
 
 # Identity matrix of order 4
-I4 = reduce(lambda m, i: m + (i * (0., ) + (1., ) + (3 - i) * (0., ), ), range(4), ())
+I4 = reduce(lambda m, i: m + (i * (0.0,) + (1.0,) + (3 - i) * (0.0,),), range(4), ())
 
 
 class FeaturePositionRelative(Entity):
@@ -57,21 +57,23 @@ class FeaturePositionRelative(Entity):
         jacobian       : jacobian output signal with respect to the robot
                          configuration,
         selec:         : selection flag "RzRyRxTzTyTx" (string).
-        """
+    """
 
     signalMap = dict()
 
-    def __init__(self,
-                 name,
-                 basePosition=None,
-                 otherPosition=None,
-                 baseReference=None,
-                 otherReference=None,
-                 JqBase=None,
-                 JqOther=None):
+    def __init__(
+        self,
+        name,
+        basePosition=None,
+        otherPosition=None,
+        baseReference=None,
+        otherReference=None,
+        JqBase=None,
+        JqOther=None,
+    ):
         self._feature = FeaturePoint6dRelative(name)
         self.obj = self._feature.obj
-        self._reference = FeaturePoint6dRelative(name + '_ref')
+        self._reference = FeaturePoint6dRelative(name + "_ref")
         # Set undefined input parameters as identity matrix
         if basePosition is None:
             basePosition = I4
@@ -83,45 +85,46 @@ class FeaturePositionRelative(Entity):
             otherReference = I4
 
         # If input positions are signals, plug them, otherwise set values
-        for (sout, sin) in \
-            ((basePosition, self._feature.signal('positionRef')),
-             (otherPosition, self._feature.signal('position')),
-             (baseReference, self._reference.signal('positionRef')),
-             (otherReference, self._reference.signal('position'))):
+        for (sout, sin) in (
+            (basePosition, self._feature.signal("positionRef")),
+            (otherPosition, self._feature.signal("position")),
+            (baseReference, self._reference.signal("positionRef")),
+            (otherReference, self._reference.signal("position")),
+        ):
             if isinstance(sout, SignalBase):
                 plug(sout, sin)
             else:
                 sin.value = sout
 
         if JqBase:
-            plug(JqBase, self._feature.signal('JqRef'))
+            plug(JqBase, self._feature.signal("JqRef"))
         if JqOther:
-            plug(JqOther, self._feature.signal('Jq'))
+            plug(JqOther, self._feature.signal("Jq"))
         self._feature.setReference(self._reference.name)
-        self._feature.signal('selec').value = Flags('111111')
-        self._feature.frame('current')
+        self._feature.signal("selec").value = Flags("111111")
+        self._feature.frame("current")
 
         # Signals stored in members
-        self.basePosition = self._feature.signal('positionRef')
-        self.otherPosition = self._feature.signal('position')
-        self.baseReference = self._reference.signal('positionRef')
-        self.otherReference = self._reference.signal('position')
-        self.JqBase = self._feature.signal('JqRef')
-        self.JqOther = self._feature.signal('Jq')
-        self.error = self._feature.signal('error')
-        self.jacobian = self._feature.signal('jacobian')
-        self.selec = self._feature.signal('selec')
+        self.basePosition = self._feature.signal("positionRef")
+        self.otherPosition = self._feature.signal("position")
+        self.baseReference = self._reference.signal("positionRef")
+        self.otherReference = self._reference.signal("position")
+        self.JqBase = self._feature.signal("JqRef")
+        self.JqOther = self._feature.signal("Jq")
+        self.error = self._feature.signal("error")
+        self.jacobian = self._feature.signal("jacobian")
+        self.selec = self._feature.signal("selec")
 
         self.signalMap = {
-            'basePosition': self.basePosition,
-            'otherPosition': self.otherPosition,
-            'baseReference': self.baseReference,
-            'otherReference': self.otherReference,
-            'JqBase': self.JqBase,
-            'JqOther': self.JqOther,
-            'error': self.error,
-            'jacobian': self.jacobian,
-            'selec': self.selec
+            "basePosition": self.basePosition,
+            "otherPosition": self.otherPosition,
+            "baseReference": self.baseReference,
+            "otherReference": self.otherReference,
+            "JqBase": self.JqBase,
+            "JqOther": self.JqOther,
+            "error": self.error,
+            "jacobian": self.jacobian,
+            "selec": self.selec,
         }
 
     @property
@@ -135,7 +138,7 @@ class FeaturePositionRelative(Entity):
         if name in self.signalMap.keys():
             return self.signalMap[name]
         else:
-            raise RuntimeError('No signal with this name')
+            raise RuntimeError("No signal with this name")
 
     def signals(self):
         """
diff --git a/src/dynamic_graph/sot/core/math_small_entities.py b/src/dynamic_graph/sot/core/math_small_entities.py
index 94796659..14f5e910 100644
--- a/src/dynamic_graph/sot/core/math_small_entities.py
+++ b/src/dynamic_graph/sot/core/math_small_entities.py
@@ -6,17 +6,59 @@
 # from operator import WeightDir
 # from operator import Nullificator
 from .operator import (
-    Add_of_double, Add_of_matrix, Add_of_vector, Component_of_vector, Compose_R_and_T, ConvolutionTemporal,
-    HomoToMatrix, HomoToRotation, HomoToTwist, Inverse_of_matrix, Inverse_of_matrixHomo, Inverse_of_matrixrotation,
-    Inverse_of_matrixtwist, Inverse_of_unitquat, MatrixDiagonal, MatrixHomoToPose, MatrixHomoToPoseQuaternion,
-    PoseQuaternionToMatrixHomo, MatrixHomoToPoseRollPitchYaw, MatrixHomoToPoseUTheta, MatrixToHomo, MatrixToQuaternion,
-    MatrixToRPY, MatrixToUTheta, MatrixHomoToSE3Vector, SE3VectorToMatrixHomo, MatrixTranspose, Multiply_double_vector,
-    Multiply_matrix_vector, Multiply_matrixTwist_vector, Multiply_matrixHomo_vector, Multiply_of_double,
-    Multiply_of_matrix, Multiply_of_matrixHomo, Multiply_of_matrixrotation, Multiply_of_matrixtwist,
-    Multiply_of_quaternion, Multiply_of_vector, PoseRollPitchYawToMatrixHomo, PoseRollPitchYawToPoseUTheta,
-    PoseUThetaToMatrixHomo, QuaternionToMatrix, RPYToMatrix, Selec_column_of_matrix, Selec_of_matrix, Selec_of_vector,
-    SkewSymToVector, Stack_of_vector, Substract_of_double, Substract_of_matrix, Substract_of_vector,
-    UThetaToQuaternion)
+    Add_of_double,
+    Add_of_matrix,
+    Add_of_vector,
+    Component_of_vector,
+    Compose_R_and_T,
+    ConvolutionTemporal,
+    HomoToMatrix,
+    HomoToRotation,
+    HomoToTwist,
+    Inverse_of_matrix,
+    Inverse_of_matrixHomo,
+    Inverse_of_matrixrotation,
+    Inverse_of_matrixtwist,
+    Inverse_of_unitquat,
+    MatrixDiagonal,
+    MatrixHomoToPose,
+    MatrixHomoToPoseQuaternion,
+    PoseQuaternionToMatrixHomo,
+    MatrixHomoToPoseRollPitchYaw,
+    MatrixHomoToPoseUTheta,
+    MatrixToHomo,
+    MatrixToQuaternion,
+    MatrixToRPY,
+    MatrixToUTheta,
+    MatrixHomoToSE3Vector,
+    SE3VectorToMatrixHomo,
+    MatrixTranspose,
+    Multiply_double_vector,
+    Multiply_matrix_vector,
+    Multiply_matrixTwist_vector,
+    Multiply_matrixHomo_vector,
+    Multiply_of_double,
+    Multiply_of_matrix,
+    Multiply_of_matrixHomo,
+    Multiply_of_matrixrotation,
+    Multiply_of_matrixtwist,
+    Multiply_of_quaternion,
+    Multiply_of_vector,
+    PoseRollPitchYawToMatrixHomo,
+    PoseRollPitchYawToPoseUTheta,
+    PoseUThetaToMatrixHomo,
+    QuaternionToMatrix,
+    RPYToMatrix,
+    Selec_column_of_matrix,
+    Selec_of_matrix,
+    Selec_of_vector,
+    SkewSymToVector,
+    Stack_of_vector,
+    Substract_of_double,
+    Substract_of_matrix,
+    Substract_of_vector,
+    UThetaToQuaternion,
+)
 
 from .derivator import Derivator_of_Matrix, Derivator_of_Vector
 from .matrix_constant import MatrixConstant
diff --git a/src/dynamic_graph/sot/core/matrix_util.py b/src/dynamic_graph/sot/core/matrix_util.py
index 2f905562..2d90144b 100644
--- a/src/dynamic_graph/sot/core/matrix_util.py
+++ b/src/dynamic_graph/sot/core/matrix_util.py
@@ -1,6 +1,6 @@
-'''
+"""
 Tiny matrix functions, taken from Oscar source code.
-'''
+"""
 
 from math import atan2
 from random import random
@@ -29,7 +29,7 @@ def vectorToTuple(M):
 
 # Convert from Roll, Pitch, Yaw to transformation Matrix
 def rpy2tr(r, p, y):
-    mat = matrix(rotate('z', y)) * matrix(rotate('y', p)) * matrix(rotate('x', r))
+    mat = matrix(rotate("z", y)) * matrix(rotate("y", p)) * matrix(rotate("x", r))
     return matrixToTuple(mat)
 
 
@@ -63,13 +63,17 @@ def generateOrthonormalM(v1):
     e1 = e1.tolist()
     e2 = e2.tolist()
     e3 = e3.tolist()
-    M = ((e1[0][0], e2[0][0], e3[0][0]), (e1[0][1], e2[0][1], e3[0][1]), (e1[0][2], e2[0][2], e3[0][2]))
+    M = (
+        (e1[0][0], e2[0][0], e3[0][0]),
+        (e1[0][1], e2[0][1], e3[0][1]),
+        (e1[0][2], e2[0][2], e3[0][2]),
+    )
     return M
 
 
 # Convert from Transformation Matrix to Roll,Pitch,Yaw
 def tr2rpy(M):
-    m = sqrt(M[2][1]**2 + M[2][2]**2)
+    m = sqrt(M[2][1] ** 2 + M[2][2] ** 2)
     p = atan2(-M[2][0], m)
 
     if abs(p - pi / 2) < 0.001:
@@ -86,17 +90,17 @@ def tr2rpy(M):
 
 
 def matrixToRPY(M):
-    '''
+    """
     Convert a 4x4 homogeneous matrix to a 6x1 rpy pose vector.
-    '''
+    """
     rot = tr2rpy(M)
     return [M[0][3], M[1][3], M[2][3], rot[2], rot[1], rot[0]]
 
 
 def RPYToMatrix(pr):
-    '''
+    """
     Convert a 6x1 rpy pose vector to a 4x4 homogeneous matrix.
-    '''
+    """
     M = array(rpy2tr(pr[3], pr[4], pr[5]))
     M[0:3, 3] = pr[0:3]
     return M
@@ -104,24 +108,37 @@ def RPYToMatrix(pr):
 
 # Transformation Matrix corresponding to a rotation about x,y or z
 def rotate(axis, ang):
-    ''' eg. T=rot('x',pi/4): rotate pi/4 rad about x axis
-    '''
+    """eg. T=rot('x',pi/4): rotate pi/4 rad about x axis"""
     ca = cos(ang)
     sa = sin(ang)
-    if axis == 'x':
+    if axis == "x":
         mat = ((1, 0, 0, 0), (0, ca, -sa, 0), (0, sa, ca, 0), (0, 0, 0, 1))
-    elif axis == 'y':
+    elif axis == "y":
         mat = ((ca, 0, sa, 0), (0, 1, 0, 0), (-sa, 0, ca, 0), (0, 0, 0, 1))
-    elif axis == 'z':
+    elif axis == "z":
         mat = ((ca, -sa, 0, 0), (sa, ca, 0, 0), (0, 0, 1, 0), (0, 0, 0, 1))
     else:
-        print('Axis should be: x,y or z only')
+        print("Axis should be: x,y or z only")
     return mat
 
 
 def quaternionToMatrix(q):
     [qx, qy, qz, qw] = q
-    R = [[1 - 2 * qy**2 - 2 * qz**2, 2 * qx * qy - 2 * qz * qw, 2 * qx * qz + 2 * qy * qw],
-         [2 * qx * qy + 2 * qz * qw, 1 - 2 * qx**2 - 2 * qz**2, 2 * qy * qz - 2 * qx * qw],
-         [2 * qx * qz - 2 * qy * qw, 2 * qy * qz + 2 * qx * qw, 1 - 2 * qx**2 - 2 * qy**2]]
+    R = [
+        [
+            1 - 2 * qy**2 - 2 * qz**2,
+            2 * qx * qy - 2 * qz * qw,
+            2 * qx * qz + 2 * qy * qw,
+        ],
+        [
+            2 * qx * qy + 2 * qz * qw,
+            1 - 2 * qx**2 - 2 * qz**2,
+            2 * qy * qz - 2 * qx * qw,
+        ],
+        [
+            2 * qx * qz - 2 * qy * qw,
+            2 * qy * qz + 2 * qx * qw,
+            1 - 2 * qx**2 - 2 * qy**2,
+        ],
+    ]
     return R
diff --git a/src/dynamic_graph/sot/core/meta_task_6d.py b/src/dynamic_graph/sot/core/meta_task_6d.py
index 4c0cc0d8..17d17cfb 100644
--- a/src/dynamic_graph/sot/core/meta_task_6d.py
+++ b/src/dynamic_graph/sot/core/meta_task_6d.py
@@ -8,55 +8,60 @@ from dynamic_graph.sot.core.task import Task
 
 def toFlags(arr):
     from warnings import warn
+
     warn("This function is deprecated. Please, use Flags directly.")
     return Flags(arr)
 
 
 class MetaTask6d(object):
-    name = ''
-    opPoint = ''
+    name = ""
+    opPoint = ""
     dyn = 0
     task = 0
     feature = 0
     featureDes = 0
 
     def opPointExist(self, opPoint):
-        sigsP = [x for x in self.dyn.signals() if x.getName().split(':')[-1] == opPoint]
-        sigsJ = [x for x in self.dyn.signals() if x.getName().split(':')[-1] == 'J' + opPoint]
+        sigsP = [x for x in self.dyn.signals() if x.getName().split(":")[-1] == opPoint]
+        sigsJ = [
+            x for x in self.dyn.signals() if x.getName().split(":")[-1] == "J" + opPoint
+        ]
         return len(sigsP) == 1 & len(sigsJ) == 1
 
     def defineDynEntities(self, dyn):
         self.dyn = dyn
 
-    def createOpPoint(self, opPoint, opPointRef='right-wrist'):
+    def createOpPoint(self, opPoint, opPointRef="right-wrist"):
         self.opPoint = opPoint
         if self.opPointExist(opPoint):
             return
         self.dyn.createOpPoint(opPoint, opPointRef)
 
     def createOpPointModif(self):
-        self.opPointModif = OpPointModifier('opmodif' + self.name)
-        plug(self.dyn.signal(self.opPoint), self.opPointModif.signal('positionIN'))
-        plug(self.dyn.signal('J' + self.opPoint), self.opPointModif.signal('jacobianIN'))
+        self.opPointModif = OpPointModifier("opmodif" + self.name)
+        plug(self.dyn.signal(self.opPoint), self.opPointModif.signal("positionIN"))
+        plug(
+            self.dyn.signal("J" + self.opPoint), self.opPointModif.signal("jacobianIN")
+        )
         self.opPointModif.activ = False
 
     def createFeatures(self):
-        self.feature = FeaturePoint6d('feature' + self.name)
-        self.featureDes = FeaturePoint6d('feature' + self.name + '_ref')
-        self.feature.selec.value = Flags('111111')
-        self.feature.frame('current')
+        self.feature = FeaturePoint6d("feature" + self.name)
+        self.featureDes = FeaturePoint6d("feature" + self.name + "_ref")
+        self.feature.selec.value = Flags("111111")
+        self.feature.frame("current")
 
     def createTask(self):
-        self.task = Task('task' + self.name)
+        self.task = Task("task" + self.name)
 
     def createGain(self):
-        self.gain = GainAdaptive('gain' + self.name)
+        self.gain = GainAdaptive("gain" + self.name)
         self.gain.set(0.1, 0.1, 125e3)
 
     def plugEverything(self):
         self.feature.setReference(self.featureDes.name)
-        plug(self.dyn.signal(self.opPoint), self.feature.signal('position'))
-        plug(self.dyn.signal('J' + self.opPoint), self.feature.signal('Jq'))
+        plug(self.dyn.signal(self.opPoint), self.feature.signal("position"))
+        plug(self.dyn.signal("J" + self.opPoint), self.feature.signal("Jq"))
         self.task.add(self.feature.name)
         plug(self.task.error, self.gain.error)
         plug(self.gain.gain, self.task.controlGain)
@@ -65,7 +70,7 @@ class MetaTask6d(object):
         self.feature.position.recompute(self.dyn.position.time)
         self.feature.keep()
 
-    def __init__(self, name, dyn, opPoint, opPointRef='right-wrist'):
+    def __init__(self, name, dyn, opPoint, opPointRef="right-wrist"):
         self.name = name
         self.defineDynEntities(dyn)
         self.createOpPoint(opPoint, opPointRef)
@@ -93,12 +98,12 @@ class MetaTask6d(object):
     @opmodif.setter
     def opmodif(self, m):
         if isinstance(m, bool) and not m:
-            plug(self.dyn.signal(self.opPoint), self.feature.signal('position'))
-            plug(self.dyn.signal('J' + self.opPoint), self.feature.signal('Jq'))
+            plug(self.dyn.signal(self.opPoint), self.feature.signal("position"))
+            plug(self.dyn.signal("J" + self.opPoint), self.feature.signal("Jq"))
             self.opPointModif.activ = False
         else:
             if not self.opPointModif.activ:
-                plug(self.opPointModif.signal('position'), self.feature.position)
-                plug(self.opPointModif.signal('jacobian'), self.feature.Jq)
+                plug(self.opPointModif.signal("position"), self.feature.position)
+                plug(self.opPointModif.signal("jacobian"), self.feature.Jq)
             self.opPointModif.setTransformation(m)
             self.opPointModif.activ = True
diff --git a/src/dynamic_graph/sot/core/meta_task_posture.py b/src/dynamic_graph/sot/core/meta_task_posture.py
index 04f95c94..e67a9ca4 100644
--- a/src/dynamic_graph/sot/core/meta_task_posture.py
+++ b/src/dynamic_graph/sot/core/meta_task_posture.py
@@ -3,7 +3,9 @@ from dynamic_graph.sot.core import Flags
 from dynamic_graph.sot.core.feature_generic import FeatureGeneric
 from dynamic_graph.sot.core.gain_adaptive import GainAdaptive
 from dynamic_graph.sot.core.matrix_util import matrixToTuple, vectorToTuple
-from dynamic_graph.sot.core.meta_task_6d import toFlags  # noqa kept for backward compatibility
+from dynamic_graph.sot.core.meta_task_6d import (
+    toFlags,
+)  # noqa kept for backward compatibility
 from dynamic_graph.sot.core.meta_tasks import setGain
 from dynamic_graph.sot.core.task import Task
 from numpy import identity, matrix, zeros
@@ -37,9 +39,9 @@ class MetaTaskPosture(object):
     def __init__(self, dyn, name="posture"):
         self.dyn = dyn
         self.name = name
-        self.feature = FeatureGeneric('feature' + name)
-        self.featureDes = FeatureGeneric('featureDes' + name)
-        self.gain = GainAdaptive('gain' + name)
+        self.feature = FeatureGeneric("feature" + name)
+        self.featureDes = FeatureGeneric("featureDes" + name)
+        self.gain = GainAdaptive("gain" + name)
         plug(dyn.position, self.feature.errorIN)
         robotDim = len(dyn.position.value)
         self.feature.jacobianIN.value = matrixToTuple(identity(robotDim))
@@ -89,5 +91,5 @@ class MetaTaskPosture(object):
 class MetaTaskKinePosture(MetaTaskPosture):
     def __init__(self, dyn, name="posture"):
         MetaTaskPosture.__init__(self, dyn, name)
-        self.task = Task('task' + name)
+        self.task = Task("task" + name)
         self.plugTask()
diff --git a/src/dynamic_graph/sot/core/meta_task_visual_point.py b/src/dynamic_graph/sot/core/meta_task_visual_point.py
index ec938df5..a5629b30 100644
--- a/src/dynamic_graph/sot/core/meta_task_visual_point.py
+++ b/src/dynamic_graph/sot/core/meta_task_visual_point.py
@@ -8,8 +8,8 @@ from dynamic_graph.sot.core.visual_point_projecter import VisualPointProjecter
 
 
 class MetaTaskVisualPoint(object):
-    name = ''
-    opPoint = ''
+    name = ""
+    opPoint = ""
     dyn = 0
     task = 0
     feature = 0
@@ -17,51 +17,57 @@ class MetaTaskVisualPoint(object):
     proj = 0
 
     def opPointExist(self, opPoint):
-        sigsP = filter(lambda x: x.getName().split(':')[-1] == opPoint, self.dyn.signals())
-        sigsJ = filter(lambda x: x.getName().split(':')[-1] == 'J' + opPoint, self.dyn.signals())
+        sigsP = filter(
+            lambda x: x.getName().split(":")[-1] == opPoint, self.dyn.signals()
+        )
+        sigsJ = filter(
+            lambda x: x.getName().split(":")[-1] == "J" + opPoint, self.dyn.signals()
+        )
         return len(sigsP) == 1 & len(sigsJ) == 1
 
     def defineDynEntities(self, dyn):
         self.dyn = dyn
 
-    def createOpPoint(self, opPoint, opPointRef='right-wrist'):
+    def createOpPoint(self, opPoint, opPointRef="right-wrist"):
         self.opPoint = opPoint
         if self.opPointExist(opPoint):
             return
         self.dyn.createOpPoint(opPoint, opPointRef)
 
     def createOpPointModif(self):
-        self.opPointModif = OpPointModifier('opmodif' + self.name)
-        plug(self.dyn.signal(self.opPoint), self.opPointModif.signal('positionIN'))
-        plug(self.dyn.signal('J' + self.opPoint), self.opPointModif.signal('jacobianIN'))
+        self.opPointModif = OpPointModifier("opmodif" + self.name)
+        plug(self.dyn.signal(self.opPoint), self.opPointModif.signal("positionIN"))
+        plug(
+            self.dyn.signal("J" + self.opPoint), self.opPointModif.signal("jacobianIN")
+        )
         self.opPointModif.activ = False
 
     def createFeatures(self):
-        self.feature = FeatureVisualPoint('feature' + self.name)
-        self.featureDes = FeatureVisualPoint('feature' + self.name + '_ref')
-        self.feature.selec.value = '11'
+        self.feature = FeatureVisualPoint("feature" + self.name)
+        self.featureDes = FeatureVisualPoint("feature" + self.name + "_ref")
+        self.feature.selec.value = "11"
 
     def createTask(self):
-        self.task = Task('task' + self.name)
+        self.task = Task("task" + self.name)
 
     def createGain(self):
-        self.gain = GainAdaptive('gain' + self.name)
+        self.gain = GainAdaptive("gain" + self.name)
         self.gain.set(0.1, 0.1, 125e3)
 
     def createProj(self):
-        self.proj = VisualPointProjecter('proj' + self.name)
+        self.proj = VisualPointProjecter("proj" + self.name)
 
     def plugEverything(self):
         self.feature.setReference(self.featureDes.name)
-        plug(self.dyn.signal(self.opPoint), self.proj.signal('transfo'))
-        plug(self.proj.signal('point2D'), self.feature.signal('xy'))
-        plug(self.proj.signal('depth'), self.feature.signal('Z'))
-        plug(self.dyn.signal('J' + self.opPoint), self.feature.signal('Jq'))
+        plug(self.dyn.signal(self.opPoint), self.proj.signal("transfo"))
+        plug(self.proj.signal("point2D"), self.feature.signal("xy"))
+        plug(self.proj.signal("depth"), self.feature.signal("Z"))
+        plug(self.dyn.signal("J" + self.opPoint), self.feature.signal("Jq"))
         self.task.add(self.feature.name)
         plug(self.task.error, self.gain.error)
         plug(self.gain.gain, self.task.controlGain)
 
-    def __init__(self, name, dyn, opPoint, opPointRef='right-wrist'):
+    def __init__(self, name, dyn, opPoint, opPointRef="right-wrist"):
         self.name = name
         self.defineDynEntities(dyn)
         self.createOpPoint(opPoint, opPointRef)
@@ -98,13 +104,13 @@ class MetaTaskVisualPoint(object):
     @opmodif.setter
     def opmodif(self, m):
         if isinstance(m, bool) and not m:
-            plug(self.dyn.signal(self.opPoint), self.proj.signal('transfo'))
-            plug(self.dyn.signal('J' + self.opPoint), self.feature.signal('Jq'))
+            plug(self.dyn.signal(self.opPoint), self.proj.signal("transfo"))
+            plug(self.dyn.signal("J" + self.opPoint), self.feature.signal("Jq"))
             self.opPointModif.activ = False
         else:
             if not self.opPointModif.activ:
-                plug(self.opPointModif.signal('position'), self.proj.signal('transfo'))
-                plug(self.opPointModif.signal('jacobian'), self.feature.signal('Jq'))
+                plug(self.opPointModif.signal("position"), self.proj.signal("transfo"))
+                plug(self.opPointModif.signal("jacobian"), self.feature.signal("Jq"))
             self.opPointModif.setTransformation(m)
             self.opPointModif.activ = True
 
diff --git a/src/dynamic_graph/sot/core/meta_tasks.py b/src/dynamic_graph/sot/core/meta_tasks.py
index ce634685..45ce19fb 100644
--- a/src/dynamic_graph/sot/core/meta_tasks.py
+++ b/src/dynamic_graph/sot/core/meta_tasks.py
@@ -5,7 +5,9 @@ from dynamic_graph.sot.core import Flags
 from dynamic_graph.sot.core.feature_generic import FeatureGeneric
 from dynamic_graph.sot.core.gain_adaptive import GainAdaptive
 from dynamic_graph.sot.core.matrix_util import rpy2tr
-from dynamic_graph.sot.core.meta_task_6d import toFlags  # noqa kept for backward compatibility
+from dynamic_graph.sot.core.meta_task_6d import (
+    toFlags,
+)  # noqa kept for backward compatibility
 
 
 class MetaTaskCom(object):
@@ -14,9 +16,9 @@ class MetaTaskCom(object):
         self.name = name
         # dyn.setProperty('ComputeCoM','true')
 
-        self.feature = FeatureGeneric('feature' + name)
-        self.featureDes = FeatureGeneric('featureDes' + name)
-        self.gain = GainAdaptive('gain' + name)
+        self.feature = FeatureGeneric("feature" + name)
+        self.featureDes = FeatureGeneric("featureDes" + name)
+        self.gain = GainAdaptive("gain" + name)
 
         plug(dyn.com, self.feature.errorIN)
         plug(dyn.Jcom, self.feature.jacobianIN)
@@ -57,7 +59,9 @@ def generic6dReference(p):
         M[0:3, 3] = p
     elif isinstance(p, (matrix, ndarray)) and p.shape == (4, 4):
         M = p
-    elif isinstance(p, (matrix, tuple)) and len(p) == 4 == len(p[0]) == len(p[1]) == len(p[2]) == len(p[3]):
+    elif isinstance(p, (matrix, tuple)) and len(p) == 4 == len(p[0]) == len(
+        p[1]
+    ) == len(p[2]) == len(p[3]):
         M = matrix(p)
     elif isinstance(p, (matrix, ndarray, tuple)) and len(p) == 6:
         M = array(rpy2tr(*p[3:7]))
@@ -72,7 +76,10 @@ def goto6d(task, position, gain=None, resetJacobian=True):
     task.featureDes.position.value = array(M)
     task.feature.selec.value = Flags("111111")
     setGain(task.gain, gain)
-    if 'resetJacobianDerivative' in task.task.__class__.__dict__.keys() and resetJacobian:
+    if (
+        "resetJacobianDerivative" in task.task.__class__.__dict__.keys()
+        and resetJacobian
+    ):
         task.task.resetJacobianDerivative()
 
 
@@ -84,5 +91,8 @@ def gotoNd(task, position, selec=None, gain=None, resetJacobian=True):
         task.feature.selec.value = selec
     task.featureDes.position.value = array(M)
     setGain(task.gain, gain)
-    if 'resetJacobianDerivative' in task.task.__class__.__dict__.keys() and resetJacobian:
+    if (
+        "resetJacobianDerivative" in task.task.__class__.__dict__.keys()
+        and resetJacobian
+    ):
         task.task.resetJacobianDerivative()
diff --git a/src/dynamic_graph/sot/core/meta_tasks_kine.py b/src/dynamic_graph/sot/core/meta_tasks_kine.py
index 66bc4559..147d0724 100644
--- a/src/dynamic_graph/sot/core/meta_tasks_kine.py
+++ b/src/dynamic_graph/sot/core/meta_tasks_kine.py
@@ -1,6 +1,7 @@
 from dynamic_graph import plug
 from dynamic_graph.sot.core.gain_adaptive import GainAdaptive
 from dynamic_graph.sot.core.meta_task_6d import MetaTask6d
+
 # TODO: this function is imported from meta_tasks_kine in several places,
 # whereas it is defined in meta_tasks
 from dynamic_graph.sot.core.meta_tasks import gotoNd  # noqa
@@ -10,16 +11,16 @@ from dynamic_graph.sot.core.task import Task
 
 class MetaTaskKine6d(MetaTask6d):
     def createTask(self):
-        self.task = Task('task' + self.name)
+        self.task = Task("task" + self.name)
 
     def createGain(self):
-        self.gain = GainAdaptive('gain' + self.name)
+        self.gain = GainAdaptive("gain" + self.name)
         self.gain.set(0.1, 0.1, 125e3)
 
     def plugEverything(self):
         self.feature.setReference(self.featureDes.name)
-        plug(self.dyn.signal(self.opPoint), self.feature.signal('position'))
-        plug(self.dyn.signal('J' + self.opPoint), self.feature.signal('Jq'))
+        plug(self.dyn.signal(self.opPoint), self.feature.signal("position"))
+        plug(self.dyn.signal("J" + self.opPoint), self.feature.signal("Jq"))
         self.task.add(self.feature.name)
         plug(self.task.error, self.gain.error)
         plug(self.gain.gain, self.task.controlGain)
@@ -32,5 +33,5 @@ class MetaTaskKine6d(MetaTask6d):
 class MetaTaskKineCom(MetaTaskCom):
     def __init__(self, dyn, name="com"):
         MetaTaskCom.__init__(self, dyn, name)
-        self.task = Task('task' + name)
+        self.task = Task("task" + name)
         self.plugTask()
diff --git a/src/dynamic_graph/sot/core/meta_tasks_kine_relative.py b/src/dynamic_graph/sot/core/meta_tasks_kine_relative.py
index e8a43afc..8e2861d5 100644
--- a/src/dynamic_graph/sot/core/meta_tasks_kine_relative.py
+++ b/src/dynamic_graph/sot/core/meta_tasks_kine_relative.py
@@ -2,39 +2,48 @@ from dynamic_graph import plug
 from dynamic_graph.sot.core import Flags
 from dynamic_graph.sot.core.feature_point6d_relative import FeaturePoint6dRelative
 from dynamic_graph.sot.core.matrix_util import matrixToTuple
-from dynamic_graph.sot.core.meta_task_6d import MetaTask6d, toFlags  # noqa kept for backward compatibility
+from dynamic_graph.sot.core.meta_task_6d import (
+    MetaTask6d,
+    toFlags,
+)  # noqa kept for backward compatibility
 from dynamic_graph.sot.core.meta_tasks import generic6dReference, setGain
 from dynamic_graph.sot.core.op_point_modifier import OpPointModifier
 
 
 class MetaTaskKine6dRel(MetaTask6d):
 
-    opPointBase = ''
+    opPointBase = ""
 
-    def createOpPointBase(self, opPointBase, opPointRefBase='left-wrist'):
+    def createOpPointBase(self, opPointBase, opPointRefBase="left-wrist"):
         self.opPointBase = opPointBase
         if self.opPointExist(opPointBase):
             return
         self.dyn.createOpPoint(opPointBase, opPointRefBase)
 
     def createOpPointModifBase(self):
-        self.opPointModifBase = OpPointModifier('opmodifBase' + self.name)
-        plug(self.dyn.signal(self.opPointBase), self.opPointModifBase.signal('positionIN'))
-        plug(self.dyn.signal('J' + self.opPointBase), self.opPointModifBase.signal('jacobianIN'))
+        self.opPointModifBase = OpPointModifier("opmodifBase" + self.name)
+        plug(
+            self.dyn.signal(self.opPointBase),
+            self.opPointModifBase.signal("positionIN"),
+        )
+        plug(
+            self.dyn.signal("J" + self.opPointBase),
+            self.opPointModifBase.signal("jacobianIN"),
+        )
         self.opPointModifBase.activ = False
 
     def createFeatures(self):
-        self.feature = FeaturePoint6dRelative('featureRel' + self.name)
-        self.featureDes = FeaturePoint6dRelative('featureRel' + self.name + '_ref')
-        self.feature.selec.value = Flags('111111')
-        self.feature.frame('current')
+        self.feature = FeaturePoint6dRelative("featureRel" + self.name)
+        self.featureDes = FeaturePoint6dRelative("featureRel" + self.name + "_ref")
+        self.feature.selec.value = Flags("111111")
+        self.feature.frame("current")
 
     def plugEverything(self):
         self.feature.setReference(self.featureDes.name)
-        plug(self.dyn.signal(self.opPoint), self.feature.signal('position'))
-        plug(self.dyn.signal('J' + self.opPoint), self.feature.signal('Jq'))
-        plug(self.dyn.signal(self.opPointBase), self.feature.signal('positionRef'))
-        plug(self.dyn.signal('J' + self.opPointBase), self.feature.signal('JqRef'))
+        plug(self.dyn.signal(self.opPoint), self.feature.signal("position"))
+        plug(self.dyn.signal("J" + self.opPoint), self.feature.signal("Jq"))
+        plug(self.dyn.signal(self.opPointBase), self.feature.signal("positionRef"))
+        plug(self.dyn.signal("J" + self.opPointBase), self.feature.signal("JqRef"))
         self.task.add(self.feature.name)
         plug(self.task.error, self.gain.error)
         plug(self.gain.gain, self.task.controlGain)
@@ -43,7 +52,15 @@ class MetaTaskKine6dRel(MetaTask6d):
         self.feature.position.recompute(self.dyn.position.time)
         self.feature.keep()
 
-    def __init__(self, name, dyn, opPoint, opPointBase, opPointRef='right-wrist', opPointRefBase='left-wrist'):
+    def __init__(
+        self,
+        name,
+        dyn,
+        opPoint,
+        opPointBase,
+        opPointRef="right-wrist",
+        opPointRefBase="left-wrist",
+    ):
         self.name = name
         self.defineDynEntities(dyn)
         self.createOpPoint(opPoint, opPointRef)
@@ -65,13 +82,13 @@ class MetaTaskKine6dRel(MetaTask6d):
     @opmodifBase.setter
     def opmodifBase(self, m):
         if isinstance(m, bool) and not m:
-            plug(self.dyn.signal(self.opPointBase), self.feature.signal('positionRef'))
-            plug(self.dyn.signal('J' + self.opPointBase), self.feature.signal('JqRef'))
+            plug(self.dyn.signal(self.opPointBase), self.feature.signal("positionRef"))
+            plug(self.dyn.signal("J" + self.opPointBase), self.feature.signal("JqRef"))
             self.opPointModifBase.activ = False
         else:
             if not self.opPointModifBase.activ:
-                plug(self.opPointModifBase.signal('position'), self.feature.positionRef)
-                plug(self.opPointModifBase.signal('jacobian'), self.feature.JqRef)
+                plug(self.opPointModifBase.signal("position"), self.feature.positionRef)
+                plug(self.opPointModifBase.signal("jacobian"), self.feature.JqRef)
             self.opPointModifBase.setTransformation(m)
             self.opPointModifBase.activ = True
 
@@ -86,7 +103,10 @@ def goto6dRel(task, position, positionRef, gain=None, resetJacobian=True):
     task.featureDes.positionRef.value = matrixToTuple(MRef)
     task.feature.selec.value = Flags("111111")
     setGain(task.gain, gain)
-    if 'resetJacobianDerivative' in task.task.__class__.__dict__.keys() and resetJacobian:
+    if (
+        "resetJacobianDerivative" in task.task.__class__.__dict__.keys()
+        and resetJacobian
+    ):
         task.task.resetJacobianDerivative()
 
 
@@ -100,7 +120,10 @@ def gotoNdRel(task, position, positionRef, selec=None, gain=None, resetJacobian=
     task.featureDes.position.value = matrixToTuple(M)
     task.featureDes.positionRef.value = matrixToTuple(MRef)
     setGain(task.gain, gain)
-    if 'resetJacobianDerivative' in task.task.__class__.__dict__.keys() and resetJacobian:
+    if (
+        "resetJacobianDerivative" in task.task.__class__.__dict__.keys()
+        and resetJacobian
+    ):
         task.task.resetJacobianDerivative()
 
 
diff --git a/src/dynamic_graph/sot/core/utils/attime.py b/src/dynamic_graph/sot/core/utils/attime.py
index dc804774..7b7d84db 100644
--- a/src/dynamic_graph/sot/core/utils/attime.py
+++ b/src/dynamic_graph/sot/core/utils/attime.py
@@ -32,14 +32,14 @@ class Calendar:
         # self.periodic=list()
 
     def __repr__(self):
-        res = ''
+        res = ""
         for iter, funpairs in sorted(self.events.iteritems()):
             res += str(iter) + ": \n"
             for funpair in funpairs:
-                if funpair[1] == '':
-                    res += funpair[0] + '\n'
+                if funpair[1] == "":
+                    res += funpair[0] + "\n"
                 else:
-                    res += str(funpair[1]) + '\n'
+                    res += str(funpair[1]) + "\n"
         return res
 
     def stop(self, *args):
@@ -57,10 +57,10 @@ class Calendar:
         self.events[iter].append(pairfundoc)
 
     def registerEvents(self, iter, *funs):
-        '''
+        """
         3 entry types are possible: 1. only the functor. 2. a pair
         (functor,doc). 3. a list of pairs (functor,doc).
-        '''
+        """
         if len(funs) == 2 and callable(funs[0]) and isinstance(funs[1], str):
             self.registerEvent(iter, (funs[0], funs[1]))
         else:
@@ -68,7 +68,7 @@ class Calendar:
                 if isinstance(fun, tuple):
                     self.registerEvent(iter, fun)
                 else:  # assert iscallable(fun)
-                    if 'functor' in fun.__dict__:
+                    if "functor" in fun.__dict__:
                         self.registerEvent(iter, (fun.functor, fun.functor.__doc__))
                     else:
                         self.registerEvent(iter, (fun, fun.__doc__))
@@ -108,6 +108,7 @@ class Calendar:
         This next calling pattern is a little bit strange. Use it to decorate
         a function definition: @attime(30) def run30(): ...
         """
+
         class calendarDeco:
             iterRef = iterarg
             calendarRef = self
@@ -118,9 +119,13 @@ class Calendar:
                     functer.__doc__ = "No doc fun"
                 if len(functer.__doc__) > 0:
                     selfdeco.__doc__ = functer.__doc__
-                    selfdeco.__doc__ += " (will be run at time " + str(selfdeco.iterRef) + ")"
+                    selfdeco.__doc__ += (
+                        " (will be run at time " + str(selfdeco.iterRef) + ")"
+                    )
                 selfdeco.fun = functer
-                selfdeco.calendarRef.registerEvents(selfdeco.iterRef, functer, functer.__doc__)
+                selfdeco.calendarRef.registerEvents(
+                    selfdeco.iterRef, functer, functer.__doc__
+                )
 
             def __call__(selfdeco, *args):
                 selfdeco.fun(*args)
@@ -134,5 +139,5 @@ class Calendar:
 
 attime = Calendar()
 
-sigset = (lambda s, v: s.__class__.value.__set__(s, v))
-refset = (lambda mt, v: mt.__class__.ref.__set__(mt, v))
+sigset = lambda s, v: s.__class__.value.__set__(s, v)
+refset = lambda mt, v: mt.__class__.ref.__set__(mt, v)
diff --git a/src/dynamic_graph/sot/core/utils/history.py b/src/dynamic_graph/sot/core/utils/history.py
index c098b50e..2e6dcd81 100644
--- a/src/dynamic_graph/sot/core/utils/history.py
+++ b/src/dynamic_graph/sot/core/utils/history.py
@@ -13,7 +13,9 @@ class History:
         self.freq = freq
         self.zmpSig = zmpSig
         self.dynEnt = dynEnt
-        self.withZmp = (self.zmpSig is not None) and ("waist" in map(lambda x: x.name, self.dynEnt.signals()))
+        self.withZmp = (self.zmpSig is not None) and (
+            "waist" in map(lambda x: x.name, self.dynEnt.signals())
+        )
 
     def record(self):
         i = self.dynEnt.position.time
@@ -22,7 +24,7 @@ class History:
             self.qdot.append(self.dynEnt.velocity.value)
             if self.withZmp:
                 waMwo = matrix(self.dynEnt.waist.value).I
-                wo_z = matrix(self.zmpSig.value + (1, )).T
+                wo_z = matrix(self.zmpSig.value + (1,)).T
                 self.zmp.append(list(vectorToTuple(waMwo * wo_z)))
 
     def restore(self, t):
@@ -35,27 +37,58 @@ class History:
         print("attime.fastForward(T0)")
 
     def dumpToOpenHRP(self, baseName="dyninv", sample=1):
-        filePos = open(baseName + '.pos', 'w')
-        fileRPY = open(baseName + '.hip', 'w')
-        fileWaist = open(baseName + '.waist', 'w')
+        filePos = open(baseName + ".pos", "w")
+        fileRPY = open(baseName + ".hip", "w")
+        fileWaist = open(baseName + ".waist", "w")
         sampleT = 0.005
         for nT, q in enumerate(self.q):
-            fileRPY.write(str(sampleT * nT) + ' ' + str(q[3]) + ' ' + str(q[4]) + ' ' + str(q[5]) + '\n')
+            fileRPY.write(
+                str(sampleT * nT)
+                + " "
+                + str(q[3])
+                + " "
+                + str(q[4])
+                + " "
+                + str(q[5])
+                + "\n"
+            )
             fileWaist.write(
-                str(sampleT * nT) + ' ' + str(q[0]) + ' ' + str(q[1]) + ' ' + str(q[2]) + ' ' + str(q[3]) + ' ' +
-                str(q[4]) + ' ' + str(q[5]) + '\n')
-            filePos.write(str(sampleT * nT) + ' ')
+                str(sampleT * nT)
+                + " "
+                + str(q[0])
+                + " "
+                + str(q[1])
+                + " "
+                + str(q[2])
+                + " "
+                + str(q[3])
+                + " "
+                + str(q[4])
+                + " "
+                + str(q[5])
+                + "\n"
+            )
+            filePos.write(str(sampleT * nT) + " ")
             for j in range(6, 36):
-                filePos.write(str(q[j]) + ' ')
-            filePos.write(10 * ' 0' + '\n')
+                filePos.write(str(q[j]) + " ")
+            filePos.write(10 * " 0" + "\n")
         if self.withZmp:
-            fileZMP = open(baseName + '.zmp', 'w')
+            fileZMP = open(baseName + ".zmp", "w")
             for nT, z in enumerate(self.zmp):
-                fileZMP.write(str(sampleT * nT) + ' ' + str(z[0]) + ' ' + str(z[1]) + ' ' + str(z[2]) + '\n')
+                fileZMP.write(
+                    str(sampleT * nT)
+                    + " "
+                    + str(z[0])
+                    + " "
+                    + str(z[1])
+                    + " "
+                    + str(z[2])
+                    + "\n"
+                )
 
-        filePos0 = open(baseName + '_pos0.py', 'w')
+        filePos0 = open(baseName + "_pos0.py", "w")
         filePos0.write("dyninv_posinit = '")
         q0 = self.q[0]
         for x in q0[6:36]:
-            filePos0.write(str(x * 180.0 / pi) + ' ')
+            filePos0.write(str(x * 180.0 / pi) + " ")
         filePos0.write("   0 0 0 0 0 0 0 0 0 0  '")
diff --git a/src/dynamic_graph/sot/core/utils/thread_interruptible_loop.py b/src/dynamic_graph/sot/core/utils/thread_interruptible_loop.py
index 9ffeea5f..7b937c06 100644
--- a/src/dynamic_graph/sot/core/utils/thread_interruptible_loop.py
+++ b/src/dynamic_graph/sot/core/utils/thread_interruptible_loop.py
@@ -60,7 +60,7 @@ class ThreadInterruptibleLoop(threading.Thread):
                     self.pause()
             time.sleep(self.sleepTime)
         self.isRunning = False
-        print('Thread loop will now end.')
+        print("Thread loop will now end.")
 
     def start(self):
         self.setPlay(True)
@@ -88,7 +88,8 @@ def loopInThread(funLoop):
     class ThreadViewer(ThreadInterruptibleLoop):
         def __init__(self):
             ThreadInterruptibleLoop.__init__(self)
-#            self.start()
+
+        #            self.start()
 
         def loop(self):
             funLoop()
diff --git a/src/dynamic_graph/sot/core/utils/viewer_helper.py b/src/dynamic_graph/sot/core/utils/viewer_helper.py
index 2215cb05..ca78b11f 100644
--- a/src/dynamic_graph/sot/core/utils/viewer_helper.py
+++ b/src/dynamic_graph/sot/core/utils/viewer_helper.py
@@ -11,10 +11,10 @@ def stateFullSize(robot, additionalData=()):
 
 
 def refreshView(robot):
-    if robot.name == 'robot':
-        name = 'hrp'
-    if robot.name == 'robot_device':
-        name = 'hrp'
+    if robot.name == "robot":
+        name = "hrp"
+    if robot.name == "robot_device":
+        name = "hrp"
     else:
         name = robot.name
     robot.viewer.updateElementConfig(name, robot.stateFullSize())
@@ -24,39 +24,39 @@ def refreshView(robot):
 
 
 def incrementView(robot, dt):
-    '''Increment then refresh.'''
+    """Increment then refresh."""
     robot.incrementNoView(dt)
     robot.refresh()
 
 
 def setView(robot, *args):
-    '''Set robot config then refresh.'''
+    """Set robot config then refresh."""
     robot.setNoView(*args)
     # print('view')
     robot.refresh()
 
 
 def addRobotViewer(robot, **args):
-    '''
+    """
     Arguments are:
       * small=False
       * server='XML-RPC' == { 'XML-RPC' | 'CORBA' }
       * verbose=True
-    '''
-    verbose = args.get('verbose', True)
-    small = args.get('small', False)
-    small_extra = args.get('small_extra', 10)
-    server = args.get('server', 'XML-RPC')
+    """
+    verbose = args.get("verbose", True)
+    small = args.get("small", False)
+    small_extra = args.get("small_extra", 10)
+    server = args.get("server", "XML-RPC")
 
     try:
         import robotviewer
+
         RobotClass = robot.__class__
 
         if small:
             if verbose:
-                print('using a small robot')
-            RobotClass.stateFullSize = lambda x: \
-                stateFullSize(x, small_extra * (0.0, ))
+                print("using a small robot")
+            RobotClass.stateFullSize = lambda x: stateFullSize(x, small_extra * (0.0,))
         else:
             RobotClass.stateFullSize = stateFullSize
 
@@ -71,7 +71,7 @@ def addRobotViewer(robot, **args):
         robot.displayList = []
 
         # Check the connection
-        if args.get('dorefresh', True):
+        if args.get("dorefresh", True):
             robot.refresh()
 
     except Exception:
@@ -91,13 +91,15 @@ class VisualPinger:
         self.refresh()
 
     def refresh(self):
-        self.viewer.updateElementConfig('pong', [0, 0.9, self.pos * 0.1, 0, 0, 0])
+        self.viewer.updateElementConfig("pong", [0, 0.9, self.pos * 0.1, 0, 0, 0])
 
     def __call__(self):
         self.pos += 1
         self.refresh()
 
 
-def updateComDisplay(robot, comsig, objname='com'):
+def updateComDisplay(robot, comsig, objname="com"):
     if comsig.time > 0:
-        robot.viewer.updateElementConfig(objname, [comsig.value[0], comsig.value[1], 0, 0, 0, 0])
+        robot.viewer.updateElementConfig(
+            objname, [comsig.value[0], comsig.value[1], 0, 0, 0, 0]
+        )
diff --git a/src/dynamic_graph/sot/core/utils/viewer_loger.py b/src/dynamic_graph/sot/core/utils/viewer_loger.py
index 39ef50f4..d2759c5c 100644
--- a/src/dynamic_graph/sot/core/utils/viewer_loger.py
+++ b/src/dynamic_graph/sot/core/utils/viewer_loger.py
@@ -3,7 +3,7 @@ import os
 
 
 class ViewerLoger:
-    '''
+    """
     This class replace the robotviewer client and log the data sent to the
     viewer for future replay.
 
@@ -11,19 +11,29 @@ class ViewerLoger:
     from viewer_loger import ViewerLoger
     robot.viewer = ViewerLoger(robot)
 
-    '''
+    """
+
     def __init__(self, robot):
         self.robot = robot
         self.viewer = robot.viewer
         self.fileMap = {}
-        for f in glob.glob('/tmp/view*.dat'):
+        for f in glob.glob("/tmp/view*.dat"):
             os.remove(f)
 
     def updateElementConfig(self, name, state):
         t = self.robot.state.time
         if name not in self.fileMap:
-            self.fileMap[name] = open('/tmp/view_' + name + '.dat', 'w')
-        self.fileMap[name].write("\t".join([str(f) for f in [
-            t,
-        ] + list(state)]) + '\n')
+            self.fileMap[name] = open("/tmp/view_" + name + ".dat", "w")
+        self.fileMap[name].write(
+            "\t".join(
+                [
+                    str(f)
+                    for f in [
+                        t,
+                    ]
+                    + list(state)
+                ]
+            )
+            + "\n"
+        )
         self.viewer.updateElementConfig(name, state)
diff --git a/src/exception/exception-abstract.cpp b/src/exception/exception-abstract.cpp
index 97d7ddd1..17742eab 100644
--- a/src/exception/exception-abstract.cpp
+++ b/src/exception/exception-abstract.cpp
@@ -20,7 +20,8 @@ using namespace dynamicgraph::sot;
 const std::string ExceptionAbstract::EXCEPTION_NAME = "Abstract";
 
 ExceptionAbstract::ExceptionAbstract(const int &_code, const string &_msg)
-    : code(_code), message(_msg)
+    : code(_code),
+      message(_msg)
 
 {
   return;
@@ -65,7 +66,7 @@ ExceptionAbstract::Param::Param(const int &_line, const char *_function,
     : functionPTR(_function), line(_line), filePTR(_file), pointersSet(true) {
   sotDEBUGINOUT(25);
 }
-#endif //#ifdef SOT_EXCEPTION_PASSING_PARAM
+#endif  //#ifdef SOT_EXCEPTION_PASSING_PARAM
 
 /* ------------------------------------------------------------------------- */
 /* --- OP << --------------------------------------------------------------- */
@@ -81,11 +82,11 @@ ostream &operator<<(ostream &os, const ExceptionAbstract &error) {
   if (error.p.set)
     os << "Thrown from " << error.p.file << ": " << error.p.function << " (#"
        << error.p.line << ")" << endl;
-#endif //#ifdef SOT_EXCEPTION_PASSING_PARAM
+#endif  //#ifdef SOT_EXCEPTION_PASSING_PARAM
   return os;
 }
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 /** \file $Source$
  */
diff --git a/src/exception/exception-dynamic.cpp b/src/exception/exception-dynamic.cpp
index e154d138..d2ee691d 100644
--- a/src/exception/exception-dynamic.cpp
+++ b/src/exception/exception-dynamic.cpp
@@ -7,9 +7,10 @@
  *
  */
 
+#include <stdarg.h>
+
 #include <cstdio>
 #include <sot/core/exception-dynamic.hh>
-#include <stdarg.h>
 
 using namespace dynamicgraph::sot;
 
diff --git a/src/exception/exception-factory.cpp b/src/exception/exception-factory.cpp
index bda77b1e..310580b7 100644
--- a/src/exception/exception-factory.cpp
+++ b/src/exception/exception-factory.cpp
@@ -7,10 +7,11 @@
  *
  */
 
+#include <stdarg.h>
+
 #include <cstdio>
 #include <sot/core/debug.hh>
 #include <sot/core/exception-factory.hh>
-#include <stdarg.h>
 
 using namespace dynamicgraph::sot;
 
diff --git a/src/exception/exception-feature.cpp b/src/exception/exception-feature.cpp
index 34efa1ed..4c8c5563 100644
--- a/src/exception/exception-feature.cpp
+++ b/src/exception/exception-feature.cpp
@@ -7,9 +7,10 @@
  *
  */
 
+#include <stdarg.h>
+
 #include <cstdio>
 #include <sot/core/exception-feature.hh>
-#include <stdarg.h>
 
 using namespace dynamicgraph::sot;
 
diff --git a/src/exception/exception-signal.cpp b/src/exception/exception-signal.cpp
index 1cb6ce0b..1cc9f825 100644
--- a/src/exception/exception-signal.cpp
+++ b/src/exception/exception-signal.cpp
@@ -7,9 +7,10 @@
  *
  */
 
+#include <stdarg.h>
+
 #include <cstdio>
 #include <sot/core/exception-signal.hh>
-#include <stdarg.h>
 
 using namespace dynamicgraph::sot;
 
diff --git a/src/exception/exception-task.cpp b/src/exception/exception-task.cpp
index 1d301291..0d916fdf 100644
--- a/src/exception/exception-task.cpp
+++ b/src/exception/exception-task.cpp
@@ -7,9 +7,10 @@
  *
  */
 
+#include <stdarg.h>
+
 #include <cstdio>
 #include <sot/core/exception-task.hh>
-#include <stdarg.h>
 
 using namespace dynamicgraph::sot;
 
diff --git a/src/exception/exception-tools.cpp b/src/exception/exception-tools.cpp
index 6ef436bd..152c0b86 100644
--- a/src/exception/exception-tools.cpp
+++ b/src/exception/exception-tools.cpp
@@ -7,9 +7,10 @@
  *
  */
 
+#include <stdarg.h>
+
 #include <cstdio>
 #include <sot/core/exception-tools.hh>
-#include <stdarg.h>
 
 using namespace dynamicgraph::sot;
 
diff --git a/src/factory/additional-functions.cpp b/src/factory/additional-functions.cpp
index a8a28e39..89dab4d5 100644
--- a/src/factory/additional-functions.cpp
+++ b/src/factory/additional-functions.cpp
@@ -8,6 +8,7 @@
  */
 
 #include <dynamic-graph/signal.h>
+
 #include <sot/core/additional-functions.hh>
 #include <sot/core/debug.hh>
 #include <sot/core/factory.hh>
diff --git a/src/factory/pool.cpp b/src/factory/pool.cpp
index 5a820bc9..c77cd8c3 100644
--- a/src/factory/pool.cpp
+++ b/src/factory/pool.cpp
@@ -17,6 +17,7 @@
 
 /* --- SOT --- */
 #include <dynamic-graph/entity.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/feature-abstract.hh>
 #include <sot/core/pool.hh>
@@ -38,7 +39,7 @@ PoolStorage::~PoolStorage(void) {
 /* --------------------------------------------------------------------- */
 void PoolStorage::registerTask(const std::string &entname, TaskAbstract *ent) {
   Tasks::iterator entkey = task.find(entname);
-  if (entkey != task.end()) // key does exist
+  if (entkey != task.end())  // key does exist
   {
     throw ExceptionFactory(ExceptionFactory::OBJECT_CONFLICT,
                            "Another task already defined with the "
@@ -65,7 +66,7 @@ TaskAbstract &PoolStorage::getTask(const std::string &name) {
 void PoolStorage::registerFeature(const std::string &entname,
                                   FeatureAbstract *ent) {
   Features::iterator entkey = feature.find(entname);
-  if (entkey != feature.end()) // key does exist
+  if (entkey != feature.end())  // key does exist
   {
     throw ExceptionFactory(ExceptionFactory::OBJECT_CONFLICT,
                            "Another feature already defined with the"
@@ -157,5 +158,5 @@ void PoolStorage::destroy() {
 PoolStorage::PoolStorage() {}
 
 PoolStorage *PoolStorage::instance_ = 0;
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
diff --git a/src/feature/feature-1d.cpp b/src/feature/feature-1d.cpp
index fde0ec72..96357841 100644
--- a/src/feature/feature-1d.cpp
+++ b/src/feature/feature-1d.cpp
@@ -77,8 +77,7 @@ dynamicgraph::Matrix &Feature1D::computeJacobian(dynamicgraph::Matrix &res,
   res.resize(1, Jac.cols());
   res.fill(0);
   for (int j = 0; j < Jac.cols(); ++j)
-    for (int i = 0; i < Jac.rows(); ++i)
-      res(0, j) += err(i) * Jac(i, j);
+    for (int i = 0; i < Jac.rows(); ++i) res(0, j) += err(i) * Jac(i, j);
 
   sotDEBUGOUT(15);
   return res;
diff --git a/src/feature/feature-abstract.cpp b/src/feature/feature-abstract.cpp
index 2eeb603c..42c0791f 100644
--- a/src/feature/feature-abstract.cpp
+++ b/src/feature/feature-abstract.cpp
@@ -7,13 +7,14 @@
  *
  */
 
+#include <dynamic-graph/all-commands.h>
+
 #include <iostream>
+#include <sot/core/feature-abstract.hh>
+#include <sot/core/pool.hh>
 
 #include "sot/core/debug.hh"
 #include "sot/core/exception-feature.hh"
-#include <dynamic-graph/all-commands.h>
-#include <sot/core/feature-abstract.hh>
-#include <sot/core/pool.hh>
 
 using namespace dynamicgraph::sot;
 using dynamicgraph::sot::ExceptionFeature;
@@ -21,10 +22,11 @@ using dynamicgraph::sot::ExceptionFeature;
 const std::string FeatureAbstract::CLASS_NAME = "FeatureAbstract";
 
 FeatureAbstract::FeatureAbstract(const std::string &name)
-    : Entity(name), selectionSIN(NULL, "sotFeatureAbstract(" + name +
-                                           ")::input(flag)::selec"),
-      errordotSIN(NULL, "sotFeatureAbstract(" + name +
-                            ")::input(vector)::errordotIN"),
+    : Entity(name),
+      selectionSIN(NULL,
+                   "sotFeatureAbstract(" + name + ")::input(flag)::selec"),
+      errordotSIN(
+          NULL, "sotFeatureAbstract(" + name + ")::input(vector)::errordotIN"),
       errorSOUT(boost::bind(&FeatureAbstract::computeError, this, _1, _2),
                 selectionSIN,
                 "sotFeatureAbstract(" + name + ")::output(vector)::error"),
@@ -33,10 +35,10 @@ FeatureAbstract::FeatureAbstract(const std::string &name)
                    "sotFeatureAbstract(" + name + ")::output(vector)::errordot")
 
       ,
-      jacobianSOUT(boost::bind(&FeatureAbstract::computeJacobian, this, _1, _2),
-                   selectionSIN,
-                   "sotFeatureAbstract(" + name +
-                       ")::output(matrix)::jacobian"),
+      jacobianSOUT(
+          boost::bind(&FeatureAbstract::computeJacobian, this, _1, _2),
+          selectionSIN,
+          "sotFeatureAbstract(" + name + ")::output(matrix)::jacobian"),
       dimensionSOUT(boost::bind(&FeatureAbstract::getDimension, this, _1, _2),
                     selectionSIN,
                     "sotFeatureAbstract(" + name + ")::output(uint)::dim") {
@@ -90,8 +92,8 @@ std::string FeatureAbstract::getReferenceByName() const {
     return "none";
 }
 
-dynamicgraph::Vector &
-FeatureAbstract::computeErrorDot(dynamicgraph::Vector &res, int time) {
+dynamicgraph::Vector &FeatureAbstract::computeErrorDot(
+    dynamicgraph::Vector &res, int time) {
   const Flags &fl = selectionSIN.access(time);
   const int &dim = dimensionSOUT(time);
 
@@ -113,8 +115,7 @@ FeatureAbstract::computeErrorDot(dynamicgraph::Vector &res, int time) {
     }
 
     for (int i = 0; i < errdotDes.size(); ++i)
-      if (fl(i))
-        res(curr++) = -errdotDes(i);
+      if (fl(i)) res(curr++) = -errdotDes(i);
   } else
     res.setZero();
 
diff --git a/src/feature/feature-generic.cpp b/src/feature/feature-generic.cpp
index 94cb5fe2..a330dc77 100644
--- a/src/feature/feature-generic.cpp
+++ b/src/feature/feature-generic.cpp
@@ -27,7 +27,8 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(FeatureGeneric, "FeatureGeneric");
 /* --------------------------------------------------------------------- */
 
 FeatureGeneric::FeatureGeneric(const string &pointName)
-    : FeatureAbstract(pointName), dimensionDefault(0),
+    : FeatureAbstract(pointName),
+      dimensionDefault(0),
       errorSIN(NULL, "sotFeatureGeneric(" + name + ")::input(vector)::errorIN"),
       jacobianSIN(NULL,
                   "sotFeatureGeneric(" + name + ")::input(matrix)::jacobianIN")
@@ -64,13 +65,11 @@ unsigned int &FeatureGeneric::getDimension(unsigned int &dim, int time) {
 
   const Flags &fl = selectionSIN.access(time);
 
-  if (dimensionDefault == 0)
-    dimensionDefault = errorSIN.access(time).size();
+  if (dimensionDefault == 0) dimensionDefault = errorSIN.access(time).size();
 
   dim = 0;
   for (unsigned int i = 0; i < dimensionDefault; ++i)
-    if (fl(i))
-      dim++;
+    if (fl(i)) dim++;
 
   sotDEBUG(25) << "# Out }" << endl;
   return dim;
@@ -107,12 +106,10 @@ Vector &FeatureGeneric::computeError(Vector &res, int time) {
 
     for (int i = 0; i < err.size(); ++i)
       if (fl(i))
-        if (fl(i))
-          res(curr++) = err(i) - errDes(i);
+        if (fl(i)) res(curr++) = err(i) - errDes(i);
   } else {
     for (int i = 0; i < err.size(); ++i)
-      if (fl(i))
-        res(curr++) = err(i);
+      if (fl(i)) res(curr++) = err(i);
   }
 
   return res;
@@ -130,8 +127,7 @@ Matrix &FeatureGeneric::computeJacobian(Matrix &res, int time) {
 
   for (unsigned int i = 0; curr < dim; ++i)
     if (fl(i)) {
-      for (int j = 0; j < Jac.cols(); ++j)
-        res(curr, j) = Jac(i, j);
+      for (int j = 0; j < Jac.cols(); ++j) res(curr, j) = Jac(i, j);
       curr++;
     }
 
diff --git a/src/feature/feature-joint-limits-command.h b/src/feature/feature-joint-limits-command.h
index f998e4db..08fface5 100644
--- a/src/feature/feature-joint-limits-command.h
+++ b/src/feature/feature-joint-limits-command.h
@@ -9,12 +9,12 @@
 #ifndef FEATURE_JOINT_LIMITS_COMMAND_H
 #define FEATURE_JOINT_LIMITS_COMMAND_H
 
-#include <boost/assign/list_of.hpp>
-
 #include <dynamic-graph/command-getter.h>
 #include <dynamic-graph/command-setter.h>
 #include <dynamic-graph/command.h>
 
+#include <boost/assign/list_of.hpp>
+
 namespace dynamicgraph {
 namespace sot {
 namespace command {
@@ -24,7 +24,7 @@ using ::dynamicgraph::command::Value;
 
 // Command Actuate
 class Actuate : public Command {
-public:
+ public:
   virtual ~Actuate() {}
   /// Create command and store it in Entity
   /// \param entity instance of Entity owning this command
@@ -33,15 +33,15 @@ public:
       : Command(entity, std::vector<Value::Type>(), docstring) {}
   virtual Value doExecute() {
     FeatureJointLimits &fjl = static_cast<FeatureJointLimits &>(owner());
-    Flags fl(63); // 0x0000003f = 00000000000000000000000000111111
+    Flags fl(63);  // 0x0000003f = 00000000000000000000000000111111
     fjl.selectionSIN = (!fl);
     // return void
     return Value();
   }
-}; // class Actuate
-} // namespace featureJointLimits
-} // namespace command
+};  // class Actuate
+}  // namespace featureJointLimits
+}  // namespace command
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // FEATURE_JOINT_LIMITS_COMMAND_H
+#endif  // FEATURE_JOINT_LIMITS_COMMAND_H
diff --git a/src/feature/feature-joint-limits.cpp b/src/feature/feature-joint-limits.cpp
index be88135b..c36ef573 100644
--- a/src/feature/feature-joint-limits.cpp
+++ b/src/feature/feature-joint-limits.cpp
@@ -18,6 +18,7 @@
 using namespace std;
 
 #include <../src/feature/feature-joint-limits-command.h>
+
 #include <sot/core/factory.hh>
 
 /* --------------------------------------------------------------------- */
@@ -31,7 +32,8 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(FeatureJointLimits, "FeatureJointLimits");
 const double FeatureJointLimits::THRESHOLD_DEFAULT = .9;
 
 FeatureJointLimits::FeatureJointLimits(const string &fName)
-    : FeatureAbstract(fName), threshold(THRESHOLD_DEFAULT)
+    : FeatureAbstract(fName),
+      threshold(THRESHOLD_DEFAULT)
 
       ,
       jointSIN(NULL,
@@ -54,9 +56,10 @@ FeatureJointLimits::FeatureJointLimits(const string &fName)
   //
   std::string docstring;
   // Actuate
-  docstring = "    \n"
-              "    Actuate\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    Actuate\n"
+      "    \n";
   addCommand("actuate",
              new command::featureJointLimits::Actuate(*this, docstring));
 }
@@ -78,8 +81,7 @@ unsigned int &FeatureJointLimits::getDimension(unsigned int &dim, int time) {
 
   dim = 0;
   for (Matrix::Index i = 0; i < NBJL; ++i)
-    if (fl(static_cast<int>(i)))
-      dim++;
+    if (fl(static_cast<int>(i))) dim++;
 
   sotDEBUG(25) << "# Out }" << endl;
   return dim;
diff --git a/src/feature/feature-line-distance.cpp b/src/feature/feature-line-distance.cpp
index 36622bd6..48d2b24d 100644
--- a/src/feature/feature-line-distance.cpp
+++ b/src/feature/feature-line-distance.cpp
@@ -15,7 +15,6 @@
 #include <sot/core/debug.hh>
 #include <sot/core/exception-feature.hh>
 #include <sot/core/feature-line-distance.hh>
-
 #include <sot/core/matrix-geometry.hh>
 
 using namespace std;
@@ -34,8 +33,8 @@ FeatureLineDistance::FeatureLineDistance(const string &pointName)
     : FeatureAbstract(pointName),
       positionSIN(NULL, "sotFeatureLineDistance(" + name +
                             ")::input(matrixHomo)::position"),
-      articularJacobianSIN(NULL, "sotFeatureLineDistance(" + name +
-                                     ")::input(matrix)::Jq"),
+      articularJacobianSIN(
+          NULL, "sotFeatureLineDistance(" + name + ")::input(matrix)::Jq"),
       positionRefSIN(NULL, "sotFeatureLineDistance(" + name +
                                ")::input(vector)::positionRef"),
       vectorSIN(NULL,
@@ -104,7 +103,7 @@ Matrix &FeatureLineDistance::computeJacobian(Matrix &J, int time) {
     const Vector &vect = vectorSIN(time);
     const MatrixHomogeneous &M = positionSIN(time);
     MatrixRotation R;
-    R = M.linear(); // wRh
+    R = M.linear();  // wRh
 
     Matrix Skew(3, 3);
     Skew(0, 0) = 0;
diff --git a/src/feature/feature-point6d-relative.cpp b/src/feature/feature-point6d-relative.cpp
index a9a0484a..471d5e14 100644
--- a/src/feature/feature-point6d-relative.cpp
+++ b/src/feature/feature-point6d-relative.cpp
@@ -12,12 +12,12 @@
 /* --------------------------------------------------------------------- */
 
 /* --- SOT --- */
+#include <dynamic-graph/all-commands.h>
+#include <dynamic-graph/pool.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/exception-feature.hh>
 #include <sot/core/feature-point6d-relative.hh>
-
-#include <dynamic-graph/all-commands.h>
-#include <dynamic-graph/pool.h>
 #include <sot/core/macros.hh>
 #include <sot/core/matrix-geometry.hh>
 
@@ -101,8 +101,7 @@ Matrix &FeaturePoint6dRelative::computeJacobian(Matrix &Jres, int time) {
   unsigned int rJ = 0;
   for (unsigned int r = 0; r < 6; ++r)
     if (fl(r)) {
-      for (unsigned int c = 0; c < cJ; ++c)
-        Jres(rJ, c) = J(r, c);
+      for (unsigned int c = 0; c < cJ; ++c) Jres(rJ, c) = J(r, c);
       rJ++;
     }
 
@@ -166,12 +165,10 @@ Vector &FeaturePoint6dRelative::computeError(Vector &error, int time) {
   error.resize(dimensionSOUT(time));
   unsigned int cursor = 0;
   for (unsigned int i = 0; i < 3; ++i) {
-    if (fl(i))
-      error(cursor++) = Merr(i, 3);
+    if (fl(i)) error(cursor++) = Merr(i, 3);
   }
   for (unsigned int i = 0; i < 3; ++i) {
-    if (fl(i + 3))
-      error(cursor++) = rerr.angle() * rerr.axis()(i);
+    if (fl(i + 3)) error(cursor++) = rerr.angle() * rerr.axis()(i);
   }
 
   sotDEBUGOUT(15);
@@ -246,12 +243,10 @@ Vector &FeaturePoint6dRelative::computeErrorDot(Vector &errordot, int time) {
   errordot.resize(dimensionSOUT(time));
   unsigned int cursor = 0;
   for (unsigned int i = 0; i < 3; ++i) {
-    if (fl(i))
-      errordot(cursor++) = dtrerr(i);
+    if (fl(i)) errordot(cursor++) = dtrerr(i);
   }
   for (unsigned int i = 0; i < 3; ++i) {
-    if (fl(i + 3))
-      errordot(cursor++) = rerr.angle() * rerr.axis()(i);
+    if (fl(i + 3)) errordot(cursor++) = rerr.angle() * rerr.axis()(i);
   }
 
   sotDEBUGOUT(15);
diff --git a/src/feature/feature-point6d.cpp b/src/feature/feature-point6d.cpp
index 536fa2cf..6e631167 100644
--- a/src/feature/feature-point6d.cpp
+++ b/src/feature/feature-point6d.cpp
@@ -22,7 +22,6 @@
 #include <dynamic-graph/command.h>
 
 #include <Eigen/LU>
-
 #include <sot/core/debug.hh>
 #include <sot/core/exception-feature.hh>
 #include <sot/core/feature-point6d.hh>
@@ -46,14 +45,21 @@ const FeaturePoint6d::ComputationFrameType
     FeaturePoint6d::COMPUTATION_FRAME_DEFAULT = FRAME_DESIRED;
 
 FeaturePoint6d::FeaturePoint6d(const string &pointName)
-    : FeatureAbstract(pointName), computationFrame_(COMPUTATION_FRAME_DEFAULT),
-      positionSIN(NULL, "sotFeaturePoint6d(" + name +
-                            ")::input(matrixHomo)::position"),
+    : FeatureAbstract(pointName),
+      computationFrame_(COMPUTATION_FRAME_DEFAULT),
+      positionSIN(
+          NULL, "sotFeaturePoint6d(" + name + ")::input(matrixHomo)::position"),
       velocitySIN(NULL,
                   "sotFeaturePoint6d(" + name + ")::input(vector)::velocity"),
-      articularJacobianSIN(NULL, "sotFeaturePoint6d(" + name +
-                                     ")::input(matrix)::Jq"),
-      error_th_(), R_(), Rref_(), Rt_(), Rreft_(), P_(3, 3), Pinv_(3, 3),
+      articularJacobianSIN(
+          NULL, "sotFeaturePoint6d(" + name + ")::input(matrix)::Jq"),
+      error_th_(),
+      R_(),
+      Rref_(),
+      Rt_(),
+      Rreft_(),
+      P_(3, 3),
+      Pinv_(3, 3),
       accuracy_(1e-8) {
   jacobianSOUT.addDependency(positionSIN);
   jacobianSOUT.addDependency(articularJacobianSIN);
@@ -74,24 +80,26 @@ FeaturePoint6d::FeaturePoint6d(const string &pointName)
     using namespace dynamicgraph::command;
     std::string docstring;
     // Set computation frame
-    docstring = "Set computation frame\n"
-                "\n"
-                "  Input:\n"
-                "    a string: 'current' or 'desired'.\n"
-                "      If 'current', the error is defined as the rotation "
-                "vector (VectorUTheta)\n"
-                "      corresponding to the position of the reference in the "
-                "current frame:\n"
-                "                         -1 *\n"
-                "        error = utheta (M  M )\n"
-                "      If 'desired',      *-1\n"
-                "        error = utheta (M   M)\n";
+    docstring =
+        "Set computation frame\n"
+        "\n"
+        "  Input:\n"
+        "    a string: 'current' or 'desired'.\n"
+        "      If 'current', the error is defined as the rotation "
+        "vector (VectorUTheta)\n"
+        "      corresponding to the position of the reference in the "
+        "current frame:\n"
+        "                         -1 *\n"
+        "        error = utheta (M  M )\n"
+        "      If 'desired',      *-1\n"
+        "        error = utheta (M   M)\n";
     addCommand("frame",
                new dynamicgraph::command::Setter<FeaturePoint6d, std::string>(
                    *this, &FeaturePoint6d::computationFrame, docstring));
-    docstring = "Get frame of computation of the error\n"
-                "\n"
-                "  See command 'frame' for definition.\n";
+    docstring =
+        "Get frame of computation of the error\n"
+        "\n"
+        "  See command 'frame' for definition.\n";
     addCommand("getFrame",
                new dynamicgraph::command::Getter<FeaturePoint6d, std::string>(
                    *this, &FeaturePoint6d::computationFrame, docstring));
@@ -135,10 +143,10 @@ void FeaturePoint6d::computationFrame(const std::string &inFrame) {
 /// \brief Get computation frame
 std::string FeaturePoint6d::computationFrame() const {
   switch (computationFrame_) {
-  case FRAME_CURRENT:
-    return "current";
-  case FRAME_DESIRED:
-    return "desired";
+    case FRAME_CURRENT:
+      return "current";
+    case FRAME_DESIRED:
+      return "desired";
   }
   assert(false && "Case not handled");
   return "Case not handled";
@@ -154,8 +162,7 @@ unsigned int &FeaturePoint6d::getDimension(unsigned int &dim, int time) {
 
   dim = 0;
   for (int i = 0; i < 6; ++i)
-    if (fl(i))
-      dim++;
+    if (fl(i)) dim++;
 
   sotDEBUG(25) << "# Out }" << endl;
   return dim;
@@ -197,12 +204,10 @@ Matrix &FeaturePoint6d::computeJacobian(Matrix &J, int time) {
     if (isReferenceSet()) {
       const MatrixHomogeneous &wMhd = getReference()->positionSIN(time);
       wRhd = wMhd.linear();
-      for (unsigned int i = 0; i < 3; ++i)
-        hdth(i) = wMhd(i, 3) - wMh(i, 3);
+      for (unsigned int i = 0; i < 3; ++i) hdth(i) = wMhd(i, 3) - wMh(i, 3);
     } else {
       wRhd.setIdentity();
-      for (unsigned int i = 0; i < 3; ++i)
-        hdth(i) = -wMh(i, 3);
+      for (unsigned int i = 0; i < 3; ++i) hdth(i) = -wMh(i, 3);
     }
     Rhdth = (wRh.inverse()) * hdth;
     MatrixRotation hdRh;
@@ -264,8 +269,7 @@ Matrix &FeaturePoint6d::computeJacobian(Matrix &J, int time) {
   unsigned int rJ = 0;
   for (unsigned int r = 0; r < 6; ++r)
     if (fl(r)) {
-      for (unsigned int c = 0; c < cJ; ++c)
-        J(rJ, c) = LJq(r, c);
+      for (unsigned int c = 0; c < cJ; ++c) J(rJ, c) = LJq(r, c);
       rJ++;
     }
 
@@ -273,13 +277,13 @@ Matrix &FeaturePoint6d::computeJacobian(Matrix &J, int time) {
   return J;
 }
 
-#define SOT_COMPUTE_H1MH2(wMh, wMhd, hMhd)                                     \
-  {                                                                            \
-    MatrixHomogeneous hMw;                                                     \
-    hMw = wMh.inverse(Eigen::Affine);                                          \
-    sotDEBUG(15) << "hMw = " << hMw << endl;                                   \
-    hMhd = hMw * wMhd;                                                         \
-    sotDEBUG(15) << "hMhd = " << hMhd << endl;                                 \
+#define SOT_COMPUTE_H1MH2(wMh, wMhd, hMhd)     \
+  {                                            \
+    MatrixHomogeneous hMw;                     \
+    hMw = wMh.inverse(Eigen::Affine);          \
+    sotDEBUG(15) << "hMw = " << hMw << endl;   \
+    hMhd = hMw * wMhd;                         \
+    sotDEBUG(15) << "hMhd = " << hMhd << endl; \
   }
 
 /** Compute the error between two visual features from a subset
@@ -303,21 +307,21 @@ Vector &FeaturePoint6d::computeError(Vector &error, int time) {
     const MatrixHomogeneous &wMhd = getReference()->positionSIN(time);
     sotDEBUG(15) << "wMhd = " << wMhd << endl;
     switch (computationFrame_) {
-    case FRAME_CURRENT:
-      SOT_COMPUTE_H1MH2(wMh, wMhd, hMhd);
-      break;
-    case FRAME_DESIRED:
-      SOT_COMPUTE_H1MH2(wMhd, wMh, hMhd);
-      break; // Compute hdMh indeed.
+      case FRAME_CURRENT:
+        SOT_COMPUTE_H1MH2(wMh, wMhd, hMhd);
+        break;
+      case FRAME_DESIRED:
+        SOT_COMPUTE_H1MH2(wMhd, wMh, hMhd);
+        break;  // Compute hdMh indeed.
     };
   } else {
     switch (computationFrame_) {
-    case FRAME_CURRENT:
-      hMhd = wMh.inverse();
-      break;
-    case FRAME_DESIRED:
-      hMhd = wMh;
-      break; // Compute hdMh indeed.
+      case FRAME_CURRENT:
+        hMhd = wMh.inverse();
+        break;
+      case FRAME_DESIRED:
+        hMhd = wMh;
+        break;  // Compute hdMh indeed.
     };
   }
 
@@ -331,8 +335,7 @@ Vector &FeaturePoint6d::computeError(Vector &error, int time) {
   error.resize(dimensionSOUT(time));
   unsigned int cursor = 0;
   for (unsigned int i = 0; i < 3; ++i) {
-    if (fl(i))
-      error(cursor++) = hMhd(i, 3);
+    if (fl(i)) error(cursor++) = hMhd(i, 3);
   }
 
   if (fl(3) || fl(4) || fl(5)) {
@@ -340,8 +343,7 @@ Vector &FeaturePoint6d::computeError(Vector &error, int time) {
     hRhd = hMhd.linear();
     error_th_.fromRotationMatrix(hRhd);
     for (unsigned int i = 0; i < 3; ++i) {
-      if (fl(i + 3))
-        error(cursor++) = error_th_.angle() * error_th_.axis()(i);
+      if (fl(i + 3)) error(cursor++) = error_th_.angle() * error_th_.axis()(i);
     }
   }
 
@@ -436,17 +438,17 @@ Vector &FeaturePoint6d::computeErrordot(Vector &errordot, int time) {
     errorSOUT.recompute(time);
     inverseJacobianRodrigues();
     switch (computationFrame_) {
-    case FRAME_CURRENT:
-      // \dot{e}_{t} = R^{T} v
-      errordot_t_ = Rt_ * v_;
-      // \dot{e}_{\theta} = P^{-1}(e_{theta})R^{*T}\omega
-      Rreftomega_ = Rreft_ * omega_;
-      errordot_th_ = Pinv_ * Rreftomega_;
-      break;
-    case FRAME_DESIRED:
-      errordot_t_ = Rreft_ * (omega_.cross(tref_ - t_) - v_);
-      errordot_th_ = -Pinv_ * (Rt_ * omega_);
-      break;
+      case FRAME_CURRENT:
+        // \dot{e}_{t} = R^{T} v
+        errordot_t_ = Rt_ * v_;
+        // \dot{e}_{\theta} = P^{-1}(e_{theta})R^{*T}\omega
+        Rreftomega_ = Rreft_ * omega_;
+        errordot_th_ = Pinv_ * Rreftomega_;
+        break;
+      case FRAME_DESIRED:
+        errordot_t_ = Rreft_ * (omega_.cross(tref_ - t_) - v_);
+        errordot_th_ = -Pinv_ * (Rt_ * omega_);
+        break;
     }
   } else {
     errordot_t_.setZero();
diff --git a/src/feature/feature-pose.cpp b/src/feature/feature-pose.cpp
index c3b9cc4f..211aa93d 100644
--- a/src/feature/feature-pose.cpp
+++ b/src/feature/feature-pose.cpp
@@ -13,18 +13,15 @@
 /* --- SOT --- */
 //#define VP_DEBUG
 //#define VP_DEBUG_MODE 45
-#include <boost/mpl/if.hpp>
-#include <boost/type_traits/is_same.hpp>
-
 #include <dynamic-graph/command-bind.h>
 #include <dynamic-graph/command-getter.h>
 #include <dynamic-graph/command-setter.h>
 #include <dynamic-graph/command.h>
 
-#include <pinocchio/multibody/liegroup/liegroup.hpp>
-
 #include <Eigen/LU>
-
+#include <boost/mpl/if.hpp>
+#include <boost/type_traits/is_same.hpp>
+#include <pinocchio/multibody/liegroup/liegroup.hpp>
 #include <sot/core/factory.hh>
 #include <sot/core/feature-pose.hh>
 #include <sot/core/feature-pose.hxx>
@@ -36,7 +33,8 @@ SOT_CORE_DISABLE_WARNING_PUSH
 SOT_CORE_DISABLE_WARNING_DEPRECATED
 typedef FeaturePose<R3xSO3Representation> FeaturePose_t;
 typedef FeaturePose<SE3Representation> FeaturePoseSE3_t;
-template <> DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(FeaturePose_t, "FeaturePose");
+template <>
+DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(FeaturePose_t, "FeaturePose");
 template <>
 DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(FeaturePoseSE3_t, "FeaturePoseSE3");
 SOT_CORE_DISABLE_WARNING_POP
@@ -45,5 +43,5 @@ namespace dynamicgraph {
 namespace sot {
 template class FeaturePose<R3xSO3Representation>;
 template class FeaturePose<SE3Representation>;
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
diff --git a/src/feature/feature-posture.cpp b/src/feature/feature-posture.cpp
index ad636cd6..ca60c5c8 100644
--- a/src/feature/feature-posture.cpp
+++ b/src/feature/feature-posture.cpp
@@ -1,14 +1,14 @@
 // Copyright 2010, François Bleibel, Thomas Moulard, Olivier Stasse,
 // JRL, CNRS/AIST.
 
-#include <boost/assign/list_of.hpp>
 #include <dynamic-graph/command-bind.h>
 #include <dynamic-graph/factory.h>
 #include <dynamic-graph/pool.h>
-#include <string>
 
+#include <boost/assign/list_of.hpp>
 #include <boost/numeric/conversion/cast.hpp>
 #include <sot/core/feature-posture.hh>
+#include <string>
 namespace dg = ::dynamicgraph;
 
 using dynamicgraph::sot::FeatureAbstract;
@@ -19,7 +19,7 @@ using command::Command;
 using command::Value;
 
 class FeaturePosture::SelectDof : public Command {
-public:
+ public:
   virtual ~SelectDof() {}
   SelectDof(FeaturePosture &entity, const std::string &docstring)
       : Command(entity, boost::assign::list_of(Value::UNSIGNED)(Value::BOOL),
@@ -32,32 +32,34 @@ public:
     feature.selectDof(dofId, control);
     return Value();
   }
-}; // class SelectDof
+};  // class SelectDof
 
 FeaturePosture::FeaturePosture(const std::string &name)
     : FeatureAbstract(name),
       state_(NULL, "FeaturePosture(" + name + ")::input(Vector)::state"),
       posture_(0, "FeaturePosture(" + name + ")::input(Vector)::posture"),
       postureDot_(0, "FeaturePosture(" + name + ")::input(Vector)::postureDot"),
-      activeDofs_(), nbActiveDofs_(0) {
+      activeDofs_(),
+      nbActiveDofs_(0) {
   signalRegistration(state_ << posture_ << postureDot_);
 
   errorSOUT.addDependency(state_);
   jacobianSOUT.setConstant(Matrix());
 
   std::string docstring;
-  docstring = "    \n"
-              "    Select degree of freedom to control\n"
-              "    \n"
-              "      input:\n"
-              "        - positive integer: rank of degree of freedom,\n"
-              "        - boolean: whether to control the selected degree of "
-              "freedom.\n"
-              "    \n"
-              "      Note: rank should be more than 5 since posture is "
-              "independent\n"
-              "        from freeflyer position.\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    Select degree of freedom to control\n"
+      "    \n"
+      "      input:\n"
+      "        - positive integer: rank of degree of freedom,\n"
+      "        - boolean: whether to control the selected degree of "
+      "freedom.\n"
+      "    \n"
+      "      Note: rank should be more than 5 since posture is "
+      "independent\n"
+      "        from freeflyer position.\n"
+      "    \n";
   addCommand("selectDof", new SelectDof(*this, docstring));
 }
 
@@ -84,8 +86,9 @@ dg::Vector &FeaturePosture::computeError(dg::Vector &res, int t) {
 }
 
 dg::Matrix &FeaturePosture::computeJacobian(dg::Matrix &, int) {
-  throw std::runtime_error("jacobian signal should be constant."
-                           " This function should never be called");
+  throw std::runtime_error(
+      "jacobian signal should be constant."
+      " This function should never be called");
 }
 
 dg::Vector &FeaturePosture::computeErrorDot(dg::Vector &res, int t) {
@@ -94,8 +97,7 @@ dg::Vector &FeaturePosture::computeErrorDot(dg::Vector &res, int t) {
   res.resize(nbActiveDofs_);
   std::size_t index = 0;
   for (std::size_t i = 0; i < activeDofs_.size(); ++i) {
-    if (activeDofs_[i])
-      res(index++) = -postureDot(i);
+    if (activeDofs_[i]) res(index++) = -postureDot(i);
   }
   return res;
 }
@@ -127,7 +129,7 @@ void FeaturePosture::selectDof(unsigned dofId, bool control) {
       activeDofs_[dofId] = true;
       nbActiveDofs_++;
     }
-  } else { // control = false
+  } else {  // control = false
     if (activeDofs_[dofId]) {
       activeDofs_[dofId] = false;
       nbActiveDofs_--;
@@ -148,5 +150,5 @@ void FeaturePosture::selectDof(unsigned dofId, bool control) {
 }
 
 DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(FeaturePosture, "FeaturePosture");
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
diff --git a/src/feature/feature-task.cpp b/src/feature/feature-task.cpp
index bb6b7290..2177dab2 100644
--- a/src/feature/feature-task.cpp
+++ b/src/feature/feature-task.cpp
@@ -13,6 +13,7 @@
 
 /* --- SOT --- */
 #include <dynamic-graph/pool.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/exception-feature.hh>
 #include <sot/core/feature-task.hh>
@@ -40,7 +41,6 @@ FeatureTask::FeatureTask(const string &pointName) : FeatureGeneric(pointName) {}
 
 void FeatureTask::display(std::ostream &os) const {
   os << "Feature from task <" << getName();
-  if (taskPtr)
-    os << ": from task " << taskPtr->getName();
+  if (taskPtr) os << ": from task " << taskPtr->getName();
   os << std::endl;
 }
diff --git a/src/feature/feature-vector3.cpp b/src/feature/feature-vector3.cpp
index 9bfefa4c..9b7899d3 100644
--- a/src/feature/feature-vector3.cpp
+++ b/src/feature/feature-vector3.cpp
@@ -16,9 +16,8 @@
 //#define VP_DEBUG_MODE 45
 #include <sot/core/debug.hh>
 #include <sot/core/exception-feature.hh>
-#include <sot/core/feature-vector3.hh>
-
 #include <sot/core/factory.hh>
+#include <sot/core/feature-vector3.hh>
 #include <sot/core/matrix-geometry.hh>
 
 using namespace dynamicgraph::sot;
@@ -35,12 +34,12 @@ FeatureVector3::FeatureVector3(const string &pointName)
     : FeatureAbstract(pointName),
       vectorSIN(NULL,
                 "sotFeatureVector3(" + name + ")::input(vector3)::vector"),
-      positionSIN(NULL, "sotFeaturePoint6d(" + name +
-                            ")::input(matrixHomo)::position"),
-      articularJacobianSIN(NULL, "sotFeatureVector3(" + name +
-                                     ")::input(matrix)::Jq"),
-      positionRefSIN(NULL, "sotFeatureVector3(" + name +
-                               ")::input(vector)::positionRef") {
+      positionSIN(
+          NULL, "sotFeaturePoint6d(" + name + ")::input(matrixHomo)::position"),
+      articularJacobianSIN(
+          NULL, "sotFeatureVector3(" + name + ")::input(matrix)::Jq"),
+      positionRefSIN(
+          NULL, "sotFeatureVector3(" + name + ")::input(vector)::positionRef") {
   jacobianSOUT.addDependency(positionSIN);
   jacobianSOUT.addDependency(articularJacobianSIN);
 
diff --git a/src/feature/feature-visual-point.cpp b/src/feature/feature-visual-point.cpp
index c768f6c4..b2167272 100644
--- a/src/feature/feature-visual-point.cpp
+++ b/src/feature/feature-visual-point.cpp
@@ -27,11 +27,12 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(FeatureVisualPoint, "FeatureVisualPoint");
 /* --------------------------------------------------------------------- */
 
 FeatureVisualPoint::FeatureVisualPoint(const string &pointName)
-    : FeatureAbstract(pointName), L(),
+    : FeatureAbstract(pointName),
+      L(),
       xySIN(NULL, "sotFeatureVisualPoint(" + name + ")::input(vector)::xy"),
       ZSIN(NULL, "sotFeatureVisualPoint(" + name + ")::input(double)::Z"),
-      articularJacobianSIN(NULL, "sotFeatureVisualPoint(" + name +
-                                     ")::input(matrix)::Jq") {
+      articularJacobianSIN(
+          NULL, "sotFeatureVisualPoint(" + name + ")::input(matrix)::Jq") {
   ZSIN = 1.;
 
   jacobianSOUT.addDependency(xySIN);
@@ -64,10 +65,8 @@ unsigned int &FeatureVisualPoint::getDimension(unsigned int &dim, int time) {
   const Flags &fl = selectionSIN.access(time);
 
   dim = 0;
-  if (fl(0))
-    dim++;
-  if (fl(1))
-    dim++;
+  if (fl(0)) dim++;
+  if (fl(1)) dim++;
 
   sotDEBUG(25) << "# Out }" << endl;
   return dim;
@@ -166,10 +165,8 @@ void FeatureVisualPoint::display(std::ostream &os) const {
   try {
     const Vector &xy = xySIN.accessCopy();
     const Flags &fl = selectionSIN.accessCopy();
-    if (fl(0))
-      os << " x=" << xy(0);
-    if (fl(1))
-      os << " y=" << xy(1);
+    if (fl(0)) os << " x=" << xy(0);
+    if (fl(1)) os << " y=" << xy(1);
   } catch (ExceptionAbstract e) {
     os << " XY or select not set.";
   }
diff --git a/src/feature/visual-point-projecter.cpp b/src/feature/visual-point-projecter.cpp
index 4a8e19c6..6f1c500f 100644
--- a/src/feature/visual-point-projecter.cpp
+++ b/src/feature/visual-point-projecter.cpp
@@ -4,6 +4,7 @@
  */
 
 #include <dynamic-graph/factory.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/visual-point-projecter.hh>
 
@@ -44,9 +45,8 @@ VisualPointProjecter::VisualPointProjecter(const std::string &name)
 /* --- SIGNALS ---------------------------------------------------------- */
 /* --- SIGNALS ---------------------------------------------------------- */
 
-dynamicgraph::Vector &
-VisualPointProjecter::point3DgazeSOUT_function(dynamicgraph::Vector &p3g,
-                                               int iter) {
+dynamicgraph::Vector &VisualPointProjecter::point3DgazeSOUT_function(
+    dynamicgraph::Vector &p3g, int iter) {
   const dynamicgraph::Vector &p3 = m_point3DSIN(iter);
   const MatrixHomogeneous &M = m_transfoSIN(iter);
   MatrixHomogeneous Mi;
@@ -55,8 +55,8 @@ VisualPointProjecter::point3DgazeSOUT_function(dynamicgraph::Vector &p3g,
   return p3g;
 }
 
-dynamicgraph::Vector &
-VisualPointProjecter::point2DSOUT_function(dynamicgraph::Vector &p2, int iter) {
+dynamicgraph::Vector &VisualPointProjecter::point2DSOUT_function(
+    dynamicgraph::Vector &p2, int iter) {
   sotDEBUGIN(15);
 
   const dynamicgraph::Vector &p3 = m_point3DgazeSOUT(iter);
@@ -86,5 +86,5 @@ void VisualPointProjecter::display(std::ostream &os) const {
   os << "VisualPointProjecter " << getName();
 }
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
diff --git a/src/filters/causal-filter.cpp b/src/filters/causal-filter.cpp
index 4d0d2c4d..0ace0ad2 100644
--- a/src/filters/causal-filter.cpp
+++ b/src/filters/causal-filter.cpp
@@ -15,7 +15,6 @@
  */
 
 #include <iostream>
-
 #include <sot/core/causal-filter.hh>
 
 using namespace dynamicgraph::sot;
@@ -38,12 +37,15 @@ CausalFilter::CausalFilter(const double &timestep, const int &xSize,
                            const Eigen::VectorXd &filter_numerator,
                            const Eigen::VectorXd &filter_denominator)
 
-    : m_dt(timestep), m_x_size(xSize),
+    : m_dt(timestep),
+      m_x_size(xSize),
       m_filter_order_m(filter_numerator.size()),
       m_filter_order_n(filter_denominator.size()),
       m_filter_numerator(filter_numerator),
-      m_filter_denominator(filter_denominator), m_first_sample(true),
-      m_pt_numerator(0), m_pt_denominator(0),
+      m_filter_denominator(filter_denominator),
+      m_first_sample(true),
+      m_pt_numerator(0),
+      m_pt_denominator(0),
       m_input_buffer(Eigen::MatrixXd::Zero(xSize, filter_numerator.size())),
       m_output_buffer(
           Eigen::MatrixXd::Zero(xSize, filter_denominator.size() - 1)) {
@@ -56,8 +58,7 @@ void CausalFilter::get_x_dx_ddx(const Eigen::VectorXd &base_x,
                                 Eigen::VectorXd &x_output_dx_ddx) {
   // const dynamicgraph::Vector &base_x = m_xSIN(iter);
   if (m_first_sample) {
-    for (int i = 0; i < m_filter_order_m; i++)
-      m_input_buffer.col(i) = base_x;
+    for (int i = 0; i < m_filter_order_m; i++) m_input_buffer.col(i) = base_x;
     for (int i = 0; i < m_filter_order_n - 1; i++)
       m_output_buffer.col(i) =
           base_x * m_filter_numerator.sum() / m_filter_denominator.sum();
@@ -112,8 +113,7 @@ void CausalFilter::switch_filter(const Eigen::VectorXd &filter_numerator,
   m_input_buffer.resize(Eigen::NoChange, filter_order_m);
   m_output_buffer.resize(Eigen::NoChange, filter_order_n - 1);
 
-  for (int i = 0; i < filter_order_m; i++)
-    m_input_buffer.col(i) = current_x;
+  for (int i = 0; i < filter_order_m; i++) m_input_buffer.col(i) = current_x;
 
   for (int i = 0; i < filter_order_n - 1; i++)
     m_output_buffer.col(i) =
diff --git a/src/filters/filter-differentiator.cpp b/src/filters/filter-differentiator.cpp
index f30a7e3f..4769606b 100644
--- a/src/filters/filter-differentiator.cpp
+++ b/src/filters/filter-differentiator.cpp
@@ -16,16 +16,17 @@
 
 #define LOGFILE "/tmp/fd_log.dat"
 
-#define LOG(x)                                                                 \
-  {                                                                            \
-    std::ofstream LogFile;                                                     \
-    LogFile.open(LOGFILE, std::ofstream::app);                                 \
-    LogFile << x << std::endl;                                                 \
-    LogFile.close();                                                           \
+#define LOG(x)                                 \
+  {                                            \
+    std::ofstream LogFile;                     \
+    LogFile.open(LOGFILE, std::ofstream::app); \
+    LogFile << x << std::endl;                 \
+    LogFile.close();                           \
   }
 
 #include <dynamic-graph/all-commands.h>
 #include <dynamic-graph/factory.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/filter-differentiator.hh>
 //#include <sot/torque_control/motor-model.hh>
@@ -55,7 +56,8 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(FilterDifferentiator,
 /* --- CONSTRUCTION ------------------------------------------------- */
 /* --- CONSTRUCTION ------------------------------------------------- */
 FilterDifferentiator::FilterDifferentiator(const std::string &name)
-    : Entity(name), CONSTRUCT_SIGNAL_IN(x, dynamicgraph::Vector),
+    : Entity(name),
+      CONSTRUCT_SIGNAL_IN(x, dynamicgraph::Vector),
       CONSTRUCT_SIGNAL_OUT(x_filtered, dynamicgraph::Vector, m_x_dx_ddxSINNER),
       CONSTRUCT_SIGNAL_OUT(dx, dynamicgraph::Vector, m_x_dx_ddxSINNER),
       CONSTRUCT_SIGNAL_OUT(ddx, dynamicgraph::Vector, m_x_dx_ddxSINNER),
@@ -78,10 +80,10 @@ FilterDifferentiator::FilterDifferentiator(const std::string &name)
                                               "Numerator of the filter",
                                               "Denominator of the filter")));
   addCommand("switch_filter",
-             makeCommandVoid2(*this, &FilterDifferentiator::switch_filter,
-                              docCommandVoid2("Switch Filter.",
-                                              "Numerator of the filter",
-                                              "Denominator of the filter")));
+             makeCommandVoid2(
+                 *this, &FilterDifferentiator::switch_filter,
+                 docCommandVoid2("Switch Filter.", "Numerator of the filter",
+                                 "Denominator of the filter")));
 }
 
 /* --- COMMANDS ------------------------------------------------------ */
@@ -117,8 +119,7 @@ void FilterDifferentiator::switch_filter(
 
 DEFINE_SIGNAL_INNER_FUNCTION(x_dx_ddx, dynamicgraph::Vector) {
   sotDEBUG(15) << "Compute x_dx inner signal " << iter << std::endl;
-  if (s.size() != 3 * m_x_size)
-    s.resize(3 * m_x_size);
+  if (s.size() != 3 * m_x_size) s.resize(3 * m_x_size);
   // read encoders
   const dynamicgraph::Vector &base_x = m_xSIN(iter);
   assert(base_x.size() == m_x_size);
@@ -136,8 +137,7 @@ DEFINE_SIGNAL_OUT_FUNCTION(x_filtered, dynamicgraph::Vector) {
   sotDEBUG(15) << "Compute x_filtered output signal " << iter << std::endl;
 
   const dynamicgraph::Vector &x_dx_ddx = m_x_dx_ddxSINNER(iter);
-  if (s.size() != m_x_size)
-    s.resize(m_x_size);
+  if (s.size() != m_x_size) s.resize(m_x_size);
   s = x_dx_ddx.head(m_x_size);
   return s;
 }
@@ -146,8 +146,7 @@ DEFINE_SIGNAL_OUT_FUNCTION(dx, dynamicgraph::Vector) {
   sotDEBUG(15) << "Compute dx output signal " << iter << std::endl;
 
   const dynamicgraph::Vector &x_dx_ddx = m_x_dx_ddxSINNER(iter);
-  if (s.size() != m_x_size)
-    s.resize(m_x_size);
+  if (s.size() != m_x_size) s.resize(m_x_size);
   s = x_dx_ddx.segment(m_x_size, m_x_size);
   return s;
 }
@@ -156,8 +155,7 @@ DEFINE_SIGNAL_OUT_FUNCTION(ddx, dynamicgraph::Vector) {
   sotDEBUG(15) << "Compute ddx output signal " << iter << std::endl;
 
   const dynamicgraph::Vector &x_dx_ddx = m_x_dx_ddxSINNER(iter);
-  if (s.size() != m_x_size)
-    s.resize(m_x_size);
+  if (s.size() != m_x_size) s.resize(m_x_size);
   s = x_dx_ddx.tail(m_x_size);
   return s;
 }
@@ -170,5 +168,5 @@ void FilterDifferentiator::display(std::ostream &os) const {
   }
 }
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
diff --git a/src/filters/madgwickahrs.cpp b/src/filters/madgwickahrs.cpp
index e21be756..baabe9cf 100644
--- a/src/filters/madgwickahrs.cpp
+++ b/src/filters/madgwickahrs.cpp
@@ -10,11 +10,11 @@
 //
 //=========================================================================
 
+#include <dynamic-graph/all-commands.h>
 #include <dynamic-graph/factory.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/madgwickahrs.hh>
-
-#include <dynamic-graph/all-commands.h>
 #include <sot/core/stop-watch.hh>
 
 namespace dynamicgraph {
@@ -42,12 +42,18 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(MadgwickAHRS, "MadgwickAHRS");
 /* --- CONSTRUCTION -------------------------------------------------- */
 /* ------------------------------------------------------------------- */
 MadgwickAHRS::MadgwickAHRS(const std::string &name)
-    : Entity(name), CONSTRUCT_SIGNAL_IN(accelerometer, dynamicgraph::Vector),
+    : Entity(name),
+      CONSTRUCT_SIGNAL_IN(accelerometer, dynamicgraph::Vector),
       CONSTRUCT_SIGNAL_IN(gyroscope, dynamicgraph::Vector),
       CONSTRUCT_SIGNAL_OUT(imu_quat, dynamicgraph::Vector,
                            m_gyroscopeSIN << m_accelerometerSIN),
-      m_initSucceeded(false), m_beta(betaDef), m_q0(1.0), m_q1(0.0), m_q2(0.0),
-      m_q3(0.0), m_sampleFreq(512.0) {
+      m_initSucceeded(false),
+      m_beta(betaDef),
+      m_q0(1.0),
+      m_q1(0.0),
+      m_q2(0.0),
+      m_q3(0.0),
+      m_sampleFreq(512.0) {
   Entity::signalRegistration(INPUT_SIGNALS << OUTPUT_SIGNALS);
 
   /* Commands. */
@@ -69,8 +75,7 @@ MadgwickAHRS::MadgwickAHRS(const std::string &name)
 }
 
 void MadgwickAHRS::init(const double &dt) {
-  if (dt <= 0.0)
-    return SEND_MSG("Timestep must be positive", MSG_TYPE_ERROR);
+  if (dt <= 0.0) return SEND_MSG("Timestep must be positive", MSG_TYPE_ERROR);
   m_sampleFreq = 1.0 / dt;
   m_initSucceeded = true;
 }
@@ -107,8 +112,7 @@ DEFINE_SIGNAL_OUT_FUNCTION(imu_quat, dynamicgraph::Vector) {
     // Update state with new measurment
     madgwickAHRSupdateIMU(gyroscope(0), gyroscope(1), gyroscope(2),
                           accelerometer(0), accelerometer(1), accelerometer(2));
-    if (s.size() != 4)
-      s.resize(4);
+    if (s.size() != 4) s.resize(4);
     s(0) = m_q0;
     s(1) = m_q1;
     s(2) = m_q2;
@@ -136,7 +140,7 @@ double MadgwickAHRS::invSqrt(double x) {
     y = *(float*)&i;
     y = y * (1.5f - (halfx * y * y));
     return y;*/
-  return (1.0 / sqrt(x)); // we're not in the 70's
+  return (1.0 / sqrt(x));  // we're not in the 70's
 }
 
 // IMU algorithm update
@@ -226,5 +230,5 @@ void MadgwickAHRS::display(std::ostream &os) const {
   } catch (ExceptionSignal e) {
   }
 }
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
diff --git a/src/math/op-point-modifier.cpp b/src/math/op-point-modifier.cpp
index b2e89140..f77af946 100644
--- a/src/math/op-point-modifier.cpp
+++ b/src/math/op-point-modifier.cpp
@@ -25,10 +25,11 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(OpPointModifier, "OpPointModifier");
 /* --------------------------------------------------------------------- */
 
 OpPointModifier::OpPointModifier(const std::string &name)
-    : Entity(name), jacobianSIN(NULL, "OpPointModifior(" + name +
-                                          ")::input(matrix)::jacobianIN"),
-      positionSIN(NULL, "OpPointModifior(" + name +
-                            ")::input(matrixhomo)::positionIN"),
+    : Entity(name),
+      jacobianSIN(NULL,
+                  "OpPointModifior(" + name + ")::input(matrix)::jacobianIN"),
+      positionSIN(
+          NULL, "OpPointModifior(" + name + ")::input(matrixhomo)::positionIN"),
       jacobianSOUT(
           boost::bind(&OpPointModifier::jacobianSOUT_function, this, _1, _2),
           jacobianSIN,
@@ -37,13 +38,13 @@ OpPointModifier::OpPointModifier(const std::string &name)
           boost::bind(&OpPointModifier::positionSOUT_function, this, _1, _2),
           positionSIN,
           "OpPointModifior(" + name + ")::output(matrixhomo)::position"),
-      transformation(), isEndEffector(true) {
+      transformation(),
+      isEndEffector(true) {
   sotDEBUGIN(15);
 
   signalRegistration(jacobianSIN << positionSIN << jacobianSOUT
                                  << positionSOUT);
   {
-
     using namespace dynamicgraph::command;
     addCommand(
         "getTransformation",
@@ -64,16 +65,15 @@ OpPointModifier::OpPointModifier(const std::string &name)
   sotDEBUGOUT(15);
 }
 
-dynamicgraph::Matrix &
-OpPointModifier::jacobianSOUT_function(dynamicgraph::Matrix &res,
-                                       const int &iter) {
+dynamicgraph::Matrix &OpPointModifier::jacobianSOUT_function(
+    dynamicgraph::Matrix &res, const int &iter) {
   if (isEndEffector) {
     const dynamicgraph::Matrix &aJa = jacobianSIN(iter);
     const MatrixHomogeneous &aMb = transformation;
 
     MatrixTwist bVa;
     buildFrom(aMb.inverse(), bVa);
-    res = bVa * aJa; // res := bJb
+    res = bVa * aJa;  // res := bJb
     return res;
   } else {
     /* Consider that the jacobian of point A in frame A is given: J  = aJa
@@ -106,13 +106,12 @@ OpPointModifier::jacobianSOUT_function(dynamicgraph::Matrix &res,
         res(i + 3, j) = oJa(i + 3, j);
       }
     }
-    return res; // res := 0Jb
+    return res;  // res := 0Jb
   }
 }
 
-MatrixHomogeneous &
-OpPointModifier::positionSOUT_function(MatrixHomogeneous &res,
-                                       const int &iter) {
+MatrixHomogeneous &OpPointModifier::positionSOUT_function(
+    MatrixHomogeneous &res, const int &iter) {
   sotDEBUGIN(15);
   sotDEBUGIN(15) << iter << " " << positionSIN.getTime()
                  << positionSOUT.getTime() << endl;
diff --git a/src/math/vector-quaternion.cpp b/src/math/vector-quaternion.cpp
index ead76d20..eb505fe1 100644
--- a/src/math/vector-quaternion.cpp
+++ b/src/math/vector-quaternion.cpp
@@ -96,7 +96,7 @@ MatrixRotation &VectorQuaternion::toMatrix(MatrixRotation &rot) const {
   double z2 = _z * _z;
   double r2 = _r * _r;
 
-  rotmat(0, 0) = r2 + x2 - y2 - z2; // fill diagonal terms
+  rotmat(0, 0) = r2 + x2 - y2 - z2;  // fill diagonal terms
   rotmat(1, 1) = r2 - x2 + y2 - z2;
   rotmat(2, 2) = r2 - x2 - y2 + z2;
 
@@ -107,7 +107,7 @@ MatrixRotation &VectorQuaternion::toMatrix(MatrixRotation &rot) const {
   double ry = _r * _y;
   double rz = _r * _z;
 
-  rotmat(0, 1) = 2 * (xy - rz); // fill off diagonal terms
+  rotmat(0, 1) = 2 * (xy - rz);  // fill off diagonal terms
   rotmat(0, 2) = 2 * (zx + ry);
   rotmat(1, 0) = 2 * (xy + rz);
   rotmat(1, 2) = 2 * (yz - rx);
diff --git a/src/matrix/derivator.cpp b/src/matrix/derivator.cpp
index 3032b719..e592b738 100644
--- a/src/matrix/derivator.cpp
+++ b/src/matrix/derivator.cpp
@@ -33,22 +33,24 @@ using namespace dynamicgraph;
 //     &regFunctiondoubleDerivator );
 // }
 
-#define SOT_FACTORY_TEMPLATE_ENTITY_PLUGIN(sotClassType, sotType, className)   \
-  template <> const double Derivator<sotType>::TIMESTEP_DEFAULT = 1.;          \
-  template <> std::string sotClassType<sotType>::getTypeName(void) {           \
-    return #sotType;                                                           \
-  }                                                                            \
-  template <>                                                                  \
-  const std::string sotClassType<sotType>::CLASS_NAME =                        \
-      std::string(className) + "_of_" + #sotType;                              \
-  extern "C" {                                                                 \
-  Entity *                                                                     \
-      regFunction##_##sotType##_##sotClassType(const std::string &objname) {   \
-    return new sotClassType<sotType>(objname);                                 \
-  }                                                                            \
-  EntityRegisterer regObj##_##sotType##_##sotClassType(                        \
-      std::string(className) + "_of_" + #sotType,                              \
-      &regFunction##_##sotType##_##sotClassType);                              \
+#define SOT_FACTORY_TEMPLATE_ENTITY_PLUGIN(sotClassType, sotType, className) \
+  template <>                                                                \
+  const double Derivator<sotType>::TIMESTEP_DEFAULT = 1.;                    \
+  template <>                                                                \
+  std::string sotClassType<sotType>::getTypeName(void) {                     \
+    return #sotType;                                                         \
+  }                                                                          \
+  template <>                                                                \
+  const std::string sotClassType<sotType>::CLASS_NAME =                      \
+      std::string(className) + "_of_" + #sotType;                            \
+  extern "C" {                                                               \
+  Entity *regFunction##_##sotType##_##sotClassType(                          \
+      const std::string &objname) {                                          \
+    return new sotClassType<sotType>(objname);                               \
+  }                                                                          \
+  EntityRegisterer regObj##_##sotType##_##sotClassType(                      \
+      std::string(className) + "_of_" + #sotType,                            \
+      &regFunction##_##sotType##_##sotClassType);                            \
   }
 
 namespace dynamicgraph {
@@ -57,15 +59,15 @@ SOT_FACTORY_TEMPLATE_ENTITY_PLUGIN(Derivator, double, "Derivator")
 SOT_FACTORY_TEMPLATE_ENTITY_PLUGIN(Derivator, Vector, "Derivator")
 SOT_FACTORY_TEMPLATE_ENTITY_PLUGIN(Derivator, Matrix, "Derivator")
 SOT_FACTORY_TEMPLATE_ENTITY_PLUGIN(Derivator, VectorQuaternion, "Derivator")
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 #include <sot/core/derivator-impl.hh>
 
 #ifdef WIN32
-#define SOT_FACTORY_TEMPLATE_ENTITY_PLUGIN_WIN32(sotClassType, sotType,        \
-                                                 className)                    \
-  sotClassType##sotType## ::sotClassType##sotType##(const std::string &name)   \
+#define SOT_FACTORY_TEMPLATE_ENTITY_PLUGIN_WIN32(sotClassType, sotType,      \
+                                                 className)                  \
+  sotClassType##sotType## ::sotClassType##sotType##(const std::string &name) \
       : sotClassType<sotType>(name){};
 
 typedef double Double;
diff --git a/src/matrix/double-constant.cpp b/src/matrix/double-constant.cpp
index 48ad16ec..5ac7e345 100644
--- a/src/matrix/double-constant.cpp
+++ b/src/matrix/double-constant.cpp
@@ -6,9 +6,9 @@
  *
  */
 
-#include <sot/core/double-constant.hh>
-
 #include <dynamic-graph/command-setter.h>
+
+#include <sot/core/double-constant.hh>
 #include <sot/core/factory.hh>
 
 namespace dynamicgraph {
@@ -24,12 +24,13 @@ DoubleConstant::DoubleConstant(const std::string &name)
   // Commands
 
   // set
-  std::string docstring = "    \n"
-                          "    Set value of output signal\n"
-                          "    \n"
-                          "      input:\n"
-                          "        - a double\n"
-                          "    \n";
+  std::string docstring =
+      "    \n"
+      "    Set value of output signal\n"
+      "    \n"
+      "      input:\n"
+      "        - a double\n"
+      "    \n";
   addCommand("set", new ::dynamicgraph::command::Setter<DoubleConstant, double>(
                         *this, &DoubleConstant::setValue, docstring));
 }
@@ -38,5 +39,5 @@ void DoubleConstant::setValue(const double &inValue) {
   SOUT.setConstant(inValue);
 }
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
diff --git a/src/matrix/fir-filter.cpp b/src/matrix/fir-filter.cpp
index adb2087c..358cf450 100644
--- a/src/matrix/fir-filter.cpp
+++ b/src/matrix/fir-filter.cpp
@@ -65,15 +65,15 @@ void FIRFilter<Vector, Matrix>::reset_signal(Vector &res,
   res.fill(0);
 }
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 #include <sot/core/fir-filter-impl.hh>
 
 #ifdef WIN32
-#define DEFINE_SPECIFICATION(sotClassType, sotSigType, sotCoefType)            \
-  sotClassType##sotSigType##sotCoefType::                                      \
-      sotClassType##sotSigType##sotCoefType(const std::string &name)           \
+#define DEFINE_SPECIFICATION(sotClassType, sotSigType, sotCoefType)  \
+  sotClassType##sotSigType##sotCoefType::                            \
+      sotClassType##sotSigType##sotCoefType(const std::string &name) \
       : sotClassType<sotSigType, sotCoefType>(name){};
 
 namespace dynamicgraph {
@@ -83,6 +83,6 @@ typedef Value dynamicgraph::command::Value;
 DEFINE_SPECIFICATION(FIRFilter, Double, Double)
 DEFINE_SPECIFICATION(FIRFilter, Vector, Double)
 DEFINE_SPECIFICATION(FIRFilter, Vector, Matrix)
-} // namespace sot
-} // namespace dynamicgraph
-#endif // WIN32
+}  // namespace sot
+}  // namespace dynamicgraph
+#endif  // WIN32
diff --git a/src/matrix/integrator-euler-python-module-py.cc b/src/matrix/integrator-euler-python-module-py.cc
index 022483ea..2b44c62a 100644
--- a/src/matrix/integrator-euler-python-module-py.cc
+++ b/src/matrix/integrator-euler-python-module-py.cc
@@ -1,8 +1,6 @@
-#include <dynamic-graph/python/module.hh>
-
 #include <boost/python/suite/indexing/vector_indexing_suite.hpp>
 #include <dynamic-graph/python/dynamic-graph-py.hh>
-
+#include <dynamic-graph/python/module.hh>
 #include <sot/core/integrator-euler.hh>
 
 namespace dg = dynamicgraph;
@@ -11,28 +9,31 @@ namespace dgs = dynamicgraph::sot;
 using dg::Matrix;
 using dg::Vector;
 
-template <typename S, typename C> void exposeIntegratorEuler() {
+template <typename S, typename C>
+void exposeIntegratorEuler() {
   typedef dgs::IntegratorEuler<S, C> IE_t;
 
   const std::string cName = dgc::Value::typeName(dgc::ValueHelper<C>::TypeID);
 
   dg::python::exposeEntity<IE_t>()
-      .add_property("numerators",
-                    +[](const IE_t &e) {
-                      return dg::python::to_py_list(e.numCoeffs().begin(),
-                                                    e.numCoeffs().end());
-                    },
-                    +[](IE_t &e, bp::object iterable) {
-                      e.numCoeffs(dg::python::to_std_vector<C>(iterable));
-                    })
-      .add_property("denominators",
-                    +[](const IE_t &e) {
-                      return dg::python::to_py_list(e.denomCoeffs().begin(),
-                                                    e.denomCoeffs().end());
-                    },
-                    +[](IE_t &e, bp::object iterable) {
-                      e.denomCoeffs(dg::python::to_std_vector<C>(iterable));
-                    });
+      .add_property(
+          "numerators",
+          +[](const IE_t &e) {
+            return dg::python::to_py_list(e.numCoeffs().begin(),
+                                          e.numCoeffs().end());
+          },
+          +[](IE_t &e, bp::object iterable) {
+            e.numCoeffs(dg::python::to_std_vector<C>(iterable));
+          })
+      .add_property(
+          "denominators",
+          +[](const IE_t &e) {
+            return dg::python::to_py_list(e.denomCoeffs().begin(),
+                                          e.denomCoeffs().end());
+          },
+          +[](IE_t &e, bp::object iterable) {
+            e.denomCoeffs(dg::python::to_std_vector<C>(iterable));
+          });
 }
 
 BOOST_PYTHON_MODULE(wrap) {
diff --git a/src/matrix/integrator-euler.cpp b/src/matrix/integrator-euler.cpp
index 03416ec0..e8693b94 100644
--- a/src/matrix/integrator-euler.cpp
+++ b/src/matrix/integrator-euler.cpp
@@ -7,12 +7,11 @@
  *
  */
 
+#include <sot/core/integrator-euler-impl.hh>
 #include <sot/core/integrator-euler.hh>
 
 #include "integrator-euler.t.cpp"
 
-#include <sot/core/integrator-euler-impl.hh>
-
 #ifdef WIN32
 IntegratorEulerVectorMatrix::IntegratorEulerVectorMatrix(
     const std::string &name)
@@ -27,4 +26,4 @@ IntegratorEulerVectorDouble::IntegratorEulerVectorDouble(
 std::string IntegratorEulerVectorDouble::getTypeName(void) {
   return "IntegratorEulerVectorDouble";
 }
-#endif // WIN32
+#endif  // WIN32
diff --git a/src/matrix/integrator-euler.t.cpp b/src/matrix/integrator-euler.t.cpp
index b8307fb2..acd53186 100644
--- a/src/matrix/integrator-euler.t.cpp
+++ b/src/matrix/integrator-euler.t.cpp
@@ -28,8 +28,8 @@ using namespace dynamicgraph;
     return CLASS_NAME;                                                         \
   }                                                                            \
   extern "C" {                                                                 \
-  Entity *                                                                     \
-      regFunction##_##sotSigType##_##sotCoefType(const std::string &objname) { \
+  Entity *regFunction##_##sotSigType##_##sotCoefType(                          \
+      const std::string &objname) {                                            \
     return new sotClassType<sotSigType, sotCoefType>(objname);                 \
   }                                                                            \
   EntityRegisterer regObj##_##sotSigType##_##sotCoefType(                      \
@@ -50,5 +50,5 @@ SOT_FACTORY_TEMPLATE_ENTITY_PLUGIN_EULER(IntegratorEuler, Vector, double,
 template class IntegratorEuler<double, double>;
 template class IntegratorEuler<Vector, double>;
 template class IntegratorEuler<Vector, Matrix>;
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
diff --git a/src/matrix/matrix-constant-command.h b/src/matrix/matrix-constant-command.h
index b6b64e34..f6cfc97d 100644
--- a/src/matrix/matrix-constant-command.h
+++ b/src/matrix/matrix-constant-command.h
@@ -9,12 +9,12 @@
 #ifndef MATRIX_CONSTANT_COMMAND_H
 #define MATRIX_CONSTANT_COMMAND_H
 
-#include <boost/assign/list_of.hpp>
-
 #include <dynamic-graph/command-getter.h>
 #include <dynamic-graph/command-setter.h>
 #include <dynamic-graph/command.h>
 
+#include <boost/assign/list_of.hpp>
+
 namespace dynamicgraph {
 namespace sot {
 namespace command {
@@ -24,7 +24,7 @@ using ::dynamicgraph::command::Value;
 
 // Command Resize
 class Resize : public Command {
-public:
+ public:
   virtual ~Resize() {}
   /// Create command and store it in Entity
   /// \param entity instance of Entity owning this command
@@ -44,10 +44,10 @@ public:
     // return void
     return Value();
   }
-}; // class Resize
-} // namespace matrixConstant
-} // namespace command
-} // namespace sot
-} // namespace dynamicgraph
+};  // class Resize
+}  // namespace matrixConstant
+}  // namespace command
+}  // namespace sot
+}  // namespace dynamicgraph
 
-#endif // MATRIX_CONSTANT_COMMAND_H
+#endif  // MATRIX_CONSTANT_COMMAND_H
diff --git a/src/matrix/matrix-constant.cpp b/src/matrix/matrix-constant.cpp
index 0d9fb4d8..eb22fd73 100644
--- a/src/matrix/matrix-constant.cpp
+++ b/src/matrix/matrix-constant.cpp
@@ -23,7 +23,9 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(MatrixConstant, "MatrixConstant");
 /* --------------------------------------------------------------------- */
 
 MatrixConstant::MatrixConstant(const std::string &name)
-    : Entity(name), rows(0), cols(0),
+    : Entity(name),
+      rows(0),
+      cols(0),
       SOUT("sotMatrixConstant(" + name + ")::output(matrix)::sout") {
   SOUT.setDependencyType(TimeDependency<int>::BOOL_DEPENDENT);
   signalRegistration(SOUT);
@@ -32,20 +34,22 @@ MatrixConstant::MatrixConstant(const std::string &name)
 
   // Resize
   std::string docstring;
-  docstring = "    \n"
-              "    Resize the matrix and set it to zero.\n"
-              "      Input\n"
-              "        - unsigned int: number of lines.\n"
-              "        - unsigned int: number of columns.\n"
-              "\n";
+  docstring =
+      "    \n"
+      "    Resize the matrix and set it to zero.\n"
+      "      Input\n"
+      "        - unsigned int: number of lines.\n"
+      "        - unsigned int: number of columns.\n"
+      "\n";
   addCommand("resize", new command::matrixConstant::Resize(*this, docstring));
   // set
-  docstring = "    \n"
-              "    Set value of output signal\n"
-              "    \n"
-              "      input:\n"
-              "        - a matrix\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    Set value of output signal\n"
+      "    \n"
+      "      input:\n"
+      "        - a matrix\n"
+      "    \n";
   addCommand(
       "set",
       new ::dynamicgraph::command::Setter<MatrixConstant, dynamicgraph::Matrix>(
diff --git a/src/matrix/matrix-svd.cpp b/src/matrix/matrix-svd.cpp
index 103bb099..95963aa0 100644
--- a/src/matrix/matrix-svd.cpp
+++ b/src/matrix/matrix-svd.cpp
@@ -55,4 +55,4 @@ void dampedInverse(const Matrix &_inputMatrix, Matrix &_inverseMatrix,
   dampedInverse(svd, _inverseMatrix, threshold);
 }
 
-} // namespace dynamicgraph
+}  // namespace dynamicgraph
diff --git a/src/matrix/operator-python-module-py.cc b/src/matrix/operator-python-module-py.cc
index d9e3a753..75bb1a2b 100644
--- a/src/matrix/operator-python-module-py.cc
+++ b/src/matrix/operator-python-module-py.cc
@@ -1,5 +1,4 @@
 #include "dynamic-graph/python/module.hh"
-
 #include "operator.hh"
 
 namespace dg = dynamicgraph;
@@ -9,7 +8,8 @@ namespace bp = boost::python;
 typedef bp::return_value_policy<bp::reference_existing_object>
     reference_existing_object;
 
-template <typename Operator> void exposeUnaryOp() {
+template <typename Operator>
+void exposeUnaryOp() {
   typedef dgs::UnaryOp<Operator> O_t;
   dg::python::exposeEntity<O_t, bp::bases<dg::Entity>,
                            dg::python::AddCommands>()
@@ -17,7 +17,8 @@ template <typename Operator> void exposeUnaryOp() {
       .def_readonly("sout", &O_t::SOUT);
 }
 
-template <typename Operator> void exposeBinaryOp() {
+template <typename Operator>
+void exposeBinaryOp() {
   typedef dgs::BinaryOp<Operator> O_t;
   dg::python::exposeEntity<O_t, bp::bases<dg::Entity>,
                            dg::python::AddCommands>()
@@ -26,7 +27,8 @@ template <typename Operator> void exposeBinaryOp() {
       .def_readonly("sout", &O_t::SOUT);
 }
 
-template <typename Operator> auto exposeVariadicOpBase() {
+template <typename Operator>
+auto exposeVariadicOpBase() {
   typedef dgs::VariadicOp<Operator> O_t;
   typedef typename O_t::Base B_t;
   return dg::python::exposeEntity<O_t, bp::bases<dg::Entity>,
@@ -42,11 +44,13 @@ template <typename Operator> auto exposeVariadicOpBase() {
            "get the number of input signal.", bp::arg("size"));
 }
 
-template <typename Operator> struct exposeVariadicOpImpl {
+template <typename Operator>
+struct exposeVariadicOpImpl {
   static void run() { exposeVariadicOpBase<Operator>(); }
 };
 
-template <typename T> struct exposeVariadicOpImpl<dgs::AdderVariadic<T> > {
+template <typename T>
+struct exposeVariadicOpImpl<dgs::AdderVariadic<T> > {
   static void run() {
     typedef dgs::VariadicOp<dgs::AdderVariadic<T> > E_t;
     exposeVariadicOpBase<dgs::AdderVariadic<T> >().add_property(
@@ -56,7 +60,8 @@ template <typename T> struct exposeVariadicOpImpl<dgs::AdderVariadic<T> > {
   }
 };
 
-template <typename Operator> void exposeVariadicOp() {
+template <typename Operator>
+void exposeVariadicOp() {
   exposeVariadicOpImpl<Operator>::run();
 }
 
diff --git a/src/matrix/operator.cpp b/src/matrix/operator.cpp
index 58f0bd52..f199f7a4 100644
--- a/src/matrix/operator.cpp
+++ b/src/matrix/operator.cpp
@@ -17,12 +17,12 @@ namespace dg = ::dynamicgraph;
 /* ------- GENERIC HELPERS -------------------------------------------------- */
 /* ---------------------------------------------------------------------------*/
 
-#define REGISTER_UNARY_OP(OpType, name)                                        \
-  template <>                                                                  \
-  const std::string UnaryOp<OpType>::CLASS_NAME = std::string(#name);          \
-  Entity *regFunction_##name(const std::string &objname) {                     \
-    return new UnaryOp<OpType>(objname);                                       \
-  }                                                                            \
+#define REGISTER_UNARY_OP(OpType, name)                               \
+  template <>                                                         \
+  const std::string UnaryOp<OpType>::CLASS_NAME = std::string(#name); \
+  Entity *regFunction_##name(const std::string &objname) {            \
+    return new UnaryOp<OpType>(objname);                              \
+  }                                                                   \
   EntityRegisterer regObj_##name(std::string(#name), &regFunction_##name)
 
 /* ---------------------------------------------------------------------------*/
@@ -85,12 +85,12 @@ REGISTER_UNARY_OP(UThetaToQuaternion, UThetaToQuaternion);
 /* ---------------------------------------------------------------------------*/
 /* ---------------------------------------------------------------------------*/
 
-#define REGISTER_BINARY_OP(OpType, name)                                       \
-  template <>                                                                  \
-  const std::string BinaryOp<OpType>::CLASS_NAME = std::string(#name);         \
-  Entity *regFunction_##name(const std::string &objname) {                     \
-    return new BinaryOp<OpType>(objname);                                      \
-  }                                                                            \
+#define REGISTER_BINARY_OP(OpType, name)                               \
+  template <>                                                          \
+  const std::string BinaryOp<OpType>::CLASS_NAME = std::string(#name); \
+  Entity *regFunction_##name(const std::string &objname) {             \
+    return new BinaryOp<OpType>(objname);                              \
+  }                                                                    \
   EntityRegisterer regObj_##name(std::string(#name), &regFunction_##name)
 
 /* --- MULTIPLICATION --------------------------------------------------- */
@@ -123,12 +123,12 @@ REGISTER_BINARY_OP(WeightedAdder<dynamicgraph::Matrix>, WeightAdd_of_matrix);
 REGISTER_BINARY_OP(WeightedAdder<dynamicgraph::Vector>, WeightAdd_of_vector);
 REGISTER_BINARY_OP(WeightedAdder<double>, WeightAdd_of_double);
 
-#define REGISTER_VARIADIC_OP(OpType, name)                                     \
-  template <>                                                                  \
-  const std::string VariadicOp<OpType>::CLASS_NAME = std::string(#name);       \
-  Entity *regFunction_##name(const std::string &objname) {                     \
-    return new VariadicOp<OpType>(objname);                                    \
-  }                                                                            \
+#define REGISTER_VARIADIC_OP(OpType, name)                               \
+  template <>                                                            \
+  const std::string VariadicOp<OpType>::CLASS_NAME = std::string(#name); \
+  Entity *regFunction_##name(const std::string &objname) {               \
+    return new VariadicOp<OpType>(objname);                              \
+  }                                                                      \
   EntityRegisterer regObj_##name(std::string(#name), &regFunction_##name)
 
 /* --- VectorMix ------------------------------------------------------------ */
@@ -152,8 +152,8 @@ REGISTER_VARIADIC_OP(Multiplier<double>, Multiply_of_double);
 REGISTER_VARIADIC_OP(BoolOp<0>, And);
 REGISTER_VARIADIC_OP(BoolOp<1>, Or);
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 /* --- TODO ------------------------------------------------------------------*/
 // The following commented lines are sot-v1 entities that are still waiting
diff --git a/src/matrix/operator.hh b/src/matrix/operator.hh
index 1b62bff6..bd11c8be 100644
--- a/src/matrix/operator.hh
+++ b/src/matrix/operator.hh
@@ -9,22 +9,19 @@
  *
  */
 
-#include <boost/function.hpp>
-
-#include <sot/core/binary-op.hh>
-#include <sot/core/unary-op.hh>
-#include <sot/core/variadic-op.hh>
-
-#include <sot/core/matrix-geometry.hh>
-
 #include <dynamic-graph/all-commands.h>
 #include <dynamic-graph/factory.h>
+#include <dynamic-graph/linear-algebra.h>
 
+#include <boost/function.hpp>
 #include <boost/numeric/conversion/cast.hpp>
 #include <deque>
-#include <dynamic-graph/linear-algebra.h>
+#include <sot/core/binary-op.hh>
 #include <sot/core/debug.hh>
 #include <sot/core/factory.hh>
+#include <sot/core/matrix-geometry.hh>
+#include <sot/core/unary-op.hh>
+#include <sot/core/variadic-op.hh>
 
 #include "../tools/type-name-helper.hh"
 
@@ -38,7 +35,8 @@ namespace dg = ::dynamicgraph;
 
 namespace dynamicgraph {
 namespace sot {
-template <typename TypeIn, typename TypeOut> struct UnaryOpHeader {
+template <typename TypeIn, typename TypeOut>
+struct UnaryOpHeader {
   typedef TypeIn Tin;
   typedef TypeOut Tout;
   static inline std::string nameTypeIn(void) {
@@ -49,11 +47,13 @@ template <typename TypeIn, typename TypeOut> struct UnaryOpHeader {
   }
   inline void addSpecificCommands(Entity &, Entity::CommandMap_t &) {}
   inline std::string getDocString() const {
-    return std::string("Undocumented unary operator\n"
-                       "  - input  ") +
+    return std::string(
+               "Undocumented unary operator\n"
+               "  - input  ") +
            nameTypeIn() +
-           std::string("\n"
-                       "  - output ") +
+           std::string(
+               "\n"
+               "  - output ") +
            nameTypeOut() + std::string("\n");
   }
 };
@@ -129,9 +129,10 @@ struct VectorComponent : public UnaryOpHeader<dg::Vector, double> {
     ADD_COMMAND("setIndex", command::makeCommandVoid1(ent, callback, doc));
   }
   inline std::string getDocString() const {
-    std::string docString("Select a component of a vector\n"
-                          "  - input  vector\n"
-                          "  - output double");
+    std::string docString(
+        "Select a component of a vector\n"
+        "  - input  vector\n"
+        "  - output double");
     return docString;
   }
 };
@@ -143,11 +144,10 @@ struct MatrixSelector : public UnaryOpHeader<dg::Matrix, dg::Matrix> {
     assert((jmin <= jmax) && (jmax <= m.cols()));
     res.resize(imax - imin, jmax - jmin);
     for (int i = imin; i < imax; ++i)
-      for (int j = jmin; j < jmax; ++j)
-        res(i - imin, j - jmin) = m(i, j);
+      for (int j = jmin; j < jmax; ++j) res(i - imin, j - jmin) = m(i, j);
   }
 
-public:
+ public:
   int imin, imax;
   int jmin, jmax;
 
@@ -181,14 +181,13 @@ public:
 
 /* ---------------------------------------------------------------------- */
 struct MatrixColumnSelector : public UnaryOpHeader<dg::Matrix, dg::Vector> {
-public:
+ public:
   inline void operator()(const Tin &m, Tout &res) const {
     assert((imin <= imax) && (imax <= m.rows()));
     assert(jcol < m.cols());
 
     res.resize(imax - imin);
-    for (int i = imin; i < imax; ++i)
-      res(i - imin) = m(i, jcol);
+    for (int i = imin; i < imax; ++i) res(i - imin) = m(i, jcol);
   }
 
   int imin, imax;
@@ -228,7 +227,7 @@ struct Diagonalizer : public UnaryOpHeader<Vector, Matrix> {
     res = r.asDiagonal();
   }
 
-public:
+ public:
   Diagonalizer(void) : nbr(0), nbc(0) {}
   unsigned int nbr, nbc;
   inline void resize(const int &r, const int &c) {
@@ -265,9 +264,10 @@ struct Normalize : public UnaryOpHeader<dg::Vector, double> {
   }
 
   inline std::string getDocString() const {
-    std::string docString("Computes the norm of a vector\n"
-                          "  - input  vector\n"
-                          "  - output double");
+    std::string docString(
+        "Computes the norm of a vector\n"
+        "  - input  vector\n"
+        "  - output double");
     return docString;
   }
 };
@@ -363,28 +363,23 @@ struct MatrixHomoToPoseRollPitchYaw
     dg::Vector t(3);
     t = M.translation();
     res.resize(6);
-    for (unsigned int i = 0; i < 3; ++i)
-      res(i) = t(i);
-    for (unsigned int i = 0; i < 3; ++i)
-      res(i + 3) = r(i);
+    for (unsigned int i = 0; i < 3; ++i) res(i) = t(i);
+    for (unsigned int i = 0; i < 3; ++i) res(i + 3) = r(i);
   }
 };
 
 struct PoseRollPitchYawToMatrixHomo
     : public UnaryOpHeader<Vector, MatrixHomogeneous> {
   inline void operator()(const dg::Vector &vect, MatrixHomogeneous &Mres) {
-
     VectorRollPitchYaw r;
-    for (unsigned int i = 0; i < 3; ++i)
-      r(i) = vect(i + 3);
+    for (unsigned int i = 0; i < 3; ++i) r(i) = vect(i + 3);
     MatrixRotation R = (Eigen::AngleAxisd(r(2), Eigen::Vector3d::UnitZ()) *
                         Eigen::AngleAxisd(r(1), Eigen::Vector3d::UnitY()) *
                         Eigen::AngleAxisd(r(0), Eigen::Vector3d::UnitX()))
                            .toRotationMatrix();
 
     dg::Vector t(3);
-    for (unsigned int i = 0; i < 3; ++i)
-      t(i) = vect(i);
+    for (unsigned int i = 0; i < 3; ++i) t(i) = vect(i);
 
     // buildFrom(R,t);
     Mres = Eigen::Translation3d(t) * R;
@@ -394,8 +389,7 @@ struct PoseRollPitchYawToMatrixHomo
 struct PoseRollPitchYawToPoseUTheta : public UnaryOpHeader<Vector, Vector> {
   inline void operator()(const dg::Vector &vect, dg::Vector &vectres) {
     VectorRollPitchYaw r;
-    for (unsigned int i = 0; i < 3; ++i)
-      r(i) = vect(i + 3);
+    for (unsigned int i = 0; i < 3; ++i) r(i) = vect(i + 3);
     MatrixRotation R = (Eigen::AngleAxisd(r(2), Eigen::Vector3d::UnitZ()) *
                         Eigen::AngleAxisd(r(1), Eigen::Vector3d::UnitY()) *
                         Eigen::AngleAxisd(r(0), Eigen::Vector3d::UnitX()))
@@ -529,14 +523,17 @@ struct BinaryOpHeader {
   }
   inline void addSpecificCommands(Entity &, Entity::CommandMap_t &) {}
   inline std::string getDocString() const {
-    return std::string("Undocumented binary operator\n"
-                       "  - input  ") +
+    return std::string(
+               "Undocumented binary operator\n"
+               "  - input  ") +
            nameTypeIn1() +
-           std::string("\n"
-                       "  -        ") +
+           std::string(
+               "\n"
+               "  -        ") +
            nameTypeIn2() +
-           std::string("\n"
-                       "  - output ") +
+           std::string(
+               "\n"
+               "  - output ") +
            nameTypeOut() + std::string("\n");
   }
 };
@@ -567,9 +564,9 @@ operator()(const dynamicgraph::sot::MatrixHomogeneous &f,
 }
 
 template <>
-inline void Multiplier_FxE__E<double, dynamicgraph::Vector>::
-operator()(const double &x, const dynamicgraph::Vector &v,
-           dynamicgraph::Vector &res) const {
+inline void Multiplier_FxE__E<double, dynamicgraph::Vector>::operator()(
+    const double &x, const dynamicgraph::Vector &v,
+    dynamicgraph::Vector &res) const {
   res = v;
   res *= x;
 }
@@ -584,7 +581,8 @@ typedef Multiplier_FxE__E<MatrixTwist, dynamicgraph::Vector>
     Multiplier_matrixTwist_vector;
 
 /* --- SUBSTRACTION ----------------------------------------------------- */
-template <typename T> struct Substraction : public BinaryOpHeader<T, T, T> {
+template <typename T>
+struct Substraction : public BinaryOpHeader<T, T, T> {
   inline void operator()(const T &v1, const T &v2, T &r) const {
     r = v1;
     r -= v2;
@@ -595,7 +593,7 @@ template <typename T> struct Substraction : public BinaryOpHeader<T, T, T> {
 struct VectorStack
     : public BinaryOpHeader<dynamicgraph::Vector, dynamicgraph::Vector,
                             dynamicgraph::Vector> {
-public:
+ public:
   int v1min, v1max;
   int v2min, v2max;
   inline void operator()(const dynamicgraph::Vector &v1,
@@ -670,8 +668,7 @@ struct ConvolutionTemporal
                           dynamicgraph::Vector &res) {
     const Vector::Index nconv = (Vector::Index)f1.size(), nsig = f2.rows();
     sotDEBUG(15) << "Size: " << nconv << "x" << nsig << std::endl;
-    if (nconv > f2.cols())
-      return; // TODO: error, this should not happen
+    if (nconv > f2.cols()) return;  // TODO: error, this should not happen
 
     res.resize(nsig);
     res.fill(0);
@@ -680,8 +677,7 @@ struct ConvolutionTemporal
          iter++) {
       const dynamicgraph::Vector &s_tau = *iter;
       sotDEBUG(45) << "Sig" << j << ": " << s_tau;
-      if (s_tau.size() != nsig)
-        return; // TODO: error throw;
+      if (s_tau.size() != nsig) return;  // TODO: error throw;
       for (int i = 0; i < nsig; ++i) {
         res(i) += f2(i, j) * s_tau(i);
       }
@@ -692,31 +688,35 @@ struct ConvolutionTemporal
                          const dynamicgraph::Matrix &m2,
                          dynamicgraph::Vector &res) {
     memory.push_front(v1);
-    while ((Vector::Index)memory.size() > m2.cols())
-      memory.pop_back();
+    while ((Vector::Index)memory.size() > m2.cols()) memory.pop_back();
     convolution(memory, m2, res);
   }
 };
 
 /* --- BOOLEAN REDUCTION ------------------------------------------------ */
 
-template <typename T> struct Comparison : public BinaryOpHeader<T, T, bool> {
+template <typename T>
+struct Comparison : public BinaryOpHeader<T, T, bool> {
   inline void operator()(const T &a, const T &b, bool &res) const {
     res = (a < b);
   }
   inline std::string getDocString() const {
     typedef BinaryOpHeader<T, T, bool> Base;
-    return std::string("Comparison of inputs:\n"
-                       "  - input  ") +
+    return std::string(
+               "Comparison of inputs:\n"
+               "  - input  ") +
            Base::nameTypeIn1() +
-           std::string("\n"
-                       "  -        ") +
+           std::string(
+               "\n"
+               "  -        ") +
            Base::nameTypeIn2() +
-           std::string("\n"
-                       "  - output ") +
+           std::string(
+               "\n"
+               "  - output ") +
            Base::nameTypeOut() +
-           std::string("\n"
-                       "  sout = ( sin1 < sin2 )\n");
+           std::string(
+               "\n"
+               "  sout = ( sin1 < sin2 )\n");
   }
 };
 
@@ -735,20 +735,25 @@ struct MatrixComparison : public BinaryOpHeader<T1, T2, bool> {
   }
   inline std::string getDocString() const {
     typedef BinaryOpHeader<T1, T2, bool> Base;
-    return std::string("Comparison of inputs:\n"
-                       "  - input  ") +
+    return std::string(
+               "Comparison of inputs:\n"
+               "  - input  ") +
            Base::nameTypeIn1() +
-           std::string("\n"
-                       "  -        ") +
+           std::string(
+               "\n"
+               "  -        ") +
            Base::nameTypeIn2() +
-           std::string("\n"
-                       "  - output ") +
+           std::string(
+               "\n"
+               "  - output ") +
            Base::nameTypeOut() +
-           std::string("\n"
-                       "  sout = ( sin1 < sin2 ).op()\n") +
-           std::string("\n"
-                       "  where op is either any (default) or all. The "
-                       "comparison can be made <=.\n");
+           std::string(
+               "\n"
+               "  sout = ( sin1 < sin2 ).op()\n") +
+           std::string(
+               "\n"
+               "  where op is either any (default) or all. The "
+               "comparison can be made <=.\n");
   }
   MatrixComparison() : any(true), equal(false) {}
   inline void addSpecificCommands(Entity &ent,
@@ -774,8 +779,9 @@ struct MatrixComparison : public BinaryOpHeader<T1, T2, bool> {
 namespace dynamicgraph {
 namespace sot {
 
-template <typename T> struct WeightedAdder : public BinaryOpHeader<T, T, T> {
-public:
+template <typename T>
+struct WeightedAdder : public BinaryOpHeader<T, T, T> {
+ public:
   double gain1, gain2;
   inline void operator()(const T &v1, const T &v2, T &res) const {
     res = v1;
@@ -807,8 +813,8 @@ public:
   }
 };
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 namespace dynamicgraph {
 namespace sot {
@@ -821,7 +827,8 @@ std::string VariadicAbstract<Tin, Tout, Time>::getTypeOutName(void) {
   return TypeNameHelper<Tout>::typeName();
 }
 
-template <typename TypeIn, typename TypeOut> struct VariadicOpHeader {
+template <typename TypeIn, typename TypeOut>
+struct VariadicOpHeader {
   typedef TypeIn Tin;
   typedef TypeOut Tout;
   inline static std::string nameTypeIn(void) {
@@ -834,18 +841,19 @@ template <typename TypeIn, typename TypeOut> struct VariadicOpHeader {
   inline void initialize(VariadicOp<Op> *, Entity::CommandMap_t &) {}
   inline void updateSignalNumber(const int &) {}
   inline std::string getDocString() const {
-    return std::string("Undocumented variadic operator\n"
-                       "  - input  " +
-                       nameTypeIn() +
-                       "\n"
-                       "  - output " +
-                       nameTypeOut() + "\n");
+    return std::string(
+        "Undocumented variadic operator\n"
+        "  - input  " +
+        nameTypeIn() +
+        "\n"
+        "  - output " +
+        nameTypeOut() + "\n");
   }
 };
 
 /* --- VectorMix ------------------------------------------------------------ */
 struct VectorMix : public VariadicOpHeader<Vector, Vector> {
-public:
+ public:
   typedef VariadicOp<VectorMix> Base;
   struct segment_t {
     Vector::Index index, size, input;
@@ -890,7 +898,8 @@ public:
 };
 
 /* --- ADDITION --------------------------------------------------------- */
-template <typename T> struct AdderVariadic : public VariadicOpHeader<T, T> {
+template <typename T>
+struct AdderVariadic : public VariadicOpHeader<T, T> {
   typedef VariadicOp<AdderVariadic> Base;
 
   Base *entity;
@@ -899,11 +908,9 @@ template <typename T> struct AdderVariadic : public VariadicOpHeader<T, T> {
   AdderVariadic() : coeffs() {}
   inline void operator()(const std::vector<const T *> &vs, T &res) const {
     assert(vs.size() == (std::size_t)coeffs.size());
-    if (vs.size() == 0)
-      return;
+    if (vs.size() == 0) return;
     res = coeffs[0] * (*vs[0]);
-    for (std::size_t i = 1; i < vs.size(); ++i)
-      res += coeffs[i] * (*vs[i]);
+    for (std::size_t i = 1; i < vs.size(); ++i) res += coeffs[i] * (*vs[i]);
   }
 
   inline void setCoeffs(const Vector &c) {
@@ -932,7 +939,8 @@ template <typename T> struct AdderVariadic : public VariadicOpHeader<T, T> {
 };
 
 /* --- MULTIPLICATION --------------------------------------------------- */
-template <typename T> struct Multiplier : public VariadicOpHeader<T, T> {
+template <typename T>
+struct Multiplier : public VariadicOpHeader<T, T> {
   typedef VariadicOp<Multiplier> Base;
 
   inline void operator()(const std::vector<const T *> &vs, T &res) const {
@@ -940,8 +948,7 @@ template <typename T> struct Multiplier : public VariadicOpHeader<T, T> {
       setIdentity(res);
     else {
       res = *vs[0];
-      for (std::size_t i = 1; i < vs.size(); ++i)
-        res *= *vs[i];
+      for (std::size_t i = 1; i < vs.size(); ++i) res *= *vs[i];
     }
   }
 
@@ -951,62 +958,58 @@ template <typename T> struct Multiplier : public VariadicOpHeader<T, T> {
     ent->setSignalNumber(2);
   }
 };
-template <> inline void Multiplier<double>::setIdentity(double &res) const {
+template <>
+inline void Multiplier<double>::setIdentity(double &res) const {
   res = 1;
 }
 template <>
-inline void Multiplier<MatrixHomogeneous>::
-operator()(const std::vector<const MatrixHomogeneous *> &vs,
-           MatrixHomogeneous &res) const {
+inline void Multiplier<MatrixHomogeneous>::operator()(
+    const std::vector<const MatrixHomogeneous *> &vs,
+    MatrixHomogeneous &res) const {
   if (vs.size() == 0)
     setIdentity(res);
   else {
     res = *vs[0];
-    for (std::size_t i = 1; i < vs.size(); ++i)
-      res = res * *vs[i];
+    for (std::size_t i = 1; i < vs.size(); ++i) res = res * *vs[i];
   }
 }
 template <>
-inline void Multiplier<Vector>::
-operator()(const std::vector<const Vector *> &vs, Vector &res) const {
+inline void Multiplier<Vector>::operator()(
+    const std::vector<const Vector *> &vs, Vector &res) const {
   if (vs.size() == 0)
     res.resize(0);
   else {
     res = *vs[0];
-    for (std::size_t i = 1; i < vs.size(); ++i)
-      res.array() *= vs[i]->array();
+    for (std::size_t i = 1; i < vs.size(); ++i) res.array() *= vs[i]->array();
   }
 }
 
 /* --- BOOLEAN --------------------------------------------------------- */
-template <int operation> struct BoolOp : public VariadicOpHeader<bool, bool> {
+template <int operation>
+struct BoolOp : public VariadicOpHeader<bool, bool> {
   typedef VariadicOp<BoolOp> Base;
 
   inline void operator()(const std::vector<const bool *> &vs, bool &res) const {
     // TODO computation could be optimized with lazy evaluation of the
     // signals. When the output result is know, the remaining signals are
     // not computed.
-    if (vs.size() == 0)
-      return;
+    if (vs.size() == 0) return;
     res = *vs[0];
-    for (std::size_t i = 1; i < vs.size(); ++i)
-      switch (operation) {
-      case 0:
-        if (!res)
-          return;
-        res = *vs[i];
-        break;
-      case 1:
-        if (res)
-          return;
-        res = *vs[i];
-        break;
+    for (std::size_t i = 1; i < vs.size(); ++i) switch (operation) {
+        case 0:
+          if (!res) return;
+          res = *vs[i];
+          break;
+        case 1:
+          if (res) return;
+          res = *vs[i];
+          break;
       }
   }
 };
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 /* --- TODO ------------------------------------------------------------------*/
 // The following commented lines are sot-v1 entities that are still waiting
diff --git a/src/matrix/vector-constant-command.h b/src/matrix/vector-constant-command.h
index cc24ed68..80a1564b 100644
--- a/src/matrix/vector-constant-command.h
+++ b/src/matrix/vector-constant-command.h
@@ -9,12 +9,12 @@
 #ifndef VECTOR_CONSTANT_COMMAND_H
 #define VECTOR_CONSTANT_COMMAND_H
 
-#include <boost/assign/list_of.hpp>
-
 #include <dynamic-graph/command-getter.h>
 #include <dynamic-graph/command-setter.h>
 #include <dynamic-graph/command.h>
 
+#include <boost/assign/list_of.hpp>
+
 namespace dynamicgraph {
 namespace sot {
 namespace command {
@@ -24,7 +24,7 @@ using ::dynamicgraph::command::Value;
 
 // Command Resize
 class Resize : public Command {
-public:
+ public:
   virtual ~Resize() {}
   /// Create command and store it in Entity
   /// \param entity instance of Entity owning this command
@@ -41,10 +41,10 @@ public:
     // return void
     return Value();
   }
-}; // class Resize
-} // namespace vectorConstant
-} // namespace command
+};  // class Resize
+}  // namespace vectorConstant
+}  // namespace command
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // VECTOR_CONSTANT_COMMAND_H
+#endif  // VECTOR_CONSTANT_COMMAND_H
diff --git a/src/matrix/vector-constant.cpp b/src/matrix/vector-constant.cpp
index 8b9eb231..4b19bd22 100644
--- a/src/matrix/vector-constant.cpp
+++ b/src/matrix/vector-constant.cpp
@@ -22,7 +22,8 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(VectorConstant, "VectorConstant");
 /* --- VECTOR ---------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 VectorConstant::VectorConstant(const std::string &name)
-    : Entity(name), rows(0),
+    : Entity(name),
+      rows(0),
       SOUT("sotVectorConstant(" + name + ")::output(vector)::sout") {
   SOUT.setDependencyType(TimeDependency<int>::BOOL_DEPENDENT);
   signalRegistration(SOUT);
@@ -32,19 +33,21 @@ VectorConstant::VectorConstant(const std::string &name)
   //
   // Resize
   std::string docstring;
-  docstring = "    \n"
-              "    Resize the vector and set it to zero.\n"
-              "      Input\n"
-              "        unsigned size.\n"
-              "\n";
+  docstring =
+      "    \n"
+      "    Resize the vector and set it to zero.\n"
+      "      Input\n"
+      "        unsigned size.\n"
+      "\n";
   addCommand("resize", new command::vectorConstant::Resize(*this, docstring));
   // set
-  docstring = "    \n"
-              "    Set value of output signal\n"
-              "    \n"
-              "      input:\n"
-              "        - a vector\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    Set value of output signal\n"
+      "    \n"
+      "      input:\n"
+      "        - a vector\n"
+      "    \n";
   addCommand(
       "set",
       new ::dynamicgraph::command::Setter<VectorConstant, dynamicgraph::Vector>(
diff --git a/src/matrix/vector-to-rotation.cpp b/src/matrix/vector-to-rotation.cpp
index 1d954075..50eb30cf 100644
--- a/src/matrix/vector-to-rotation.cpp
+++ b/src/matrix/vector-to-rotation.cpp
@@ -7,12 +7,11 @@
  *
  */
 
-#include <sot/core/vector-to-rotation.hh>
-
 #include <sot/core/debug.hh>
 #include <sot/core/factory.hh>
 #include <sot/core/macros-signal.hh>
 #include <sot/core/macros.hh>
+#include <sot/core/vector-to-rotation.hh>
 
 using namespace std;
 using namespace dynamicgraph::sot;
@@ -28,21 +27,21 @@ SOT_CORE_DISABLE_WARNING_POP
 /* --------------------------------------------------------------------- */
 
 VectorToRotation::VectorToRotation(const std::string &name)
-    : Entity(name), size(0), axes(0),
+    : Entity(name),
+      size(0),
+      axes(0),
       SIN(NULL, "sotVectorToRotation(" + name + ")::output(vector)::sin"),
       SOUT(SOT_MEMBER_SIGNAL_1(VectorToRotation::computeRotation, SIN,
                                dynamicgraph::Vector),
            "sotVectorToRotation(" + name + ")::output(matrixRotation)::sout") {
-
   signalRegistration(SIN << SOUT);
 }
 /* --------------------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 
-MatrixRotation &
-VectorToRotation::computeRotation(const dynamicgraph::Vector &angles,
-                                  MatrixRotation &res) {
+MatrixRotation &VectorToRotation::computeRotation(
+    const dynamicgraph::Vector &angles, MatrixRotation &res) {
   res.setIdentity();
   MatrixRotation Ra, Rtmp;
   for (unsigned int i = 0; i < size; ++i) {
@@ -51,27 +50,27 @@ VectorToRotation::computeRotation(const dynamicgraph::Vector &angles,
     const double sa = sin(angles(i));
     const unsigned int i_X = 0, i_Y = 1, i_Z = 2;
     switch (axes[i]) {
-    case AXIS_X: {
-      Ra(i_Y, i_Y) = ca;
-      Ra(i_Y, i_Z) = -sa;
-      Ra(i_Z, i_Y) = sa;
-      Ra(i_Z, i_Z) = ca;
-      break;
-    }
-    case AXIS_Y: {
-      Ra(i_Z, i_Z) = ca;
-      Ra(i_Z, i_X) = -sa;
-      Ra(i_X, i_Z) = sa;
-      Ra(i_X, i_X) = ca;
-      break;
-    }
-    case AXIS_Z: {
-      Ra(i_X, i_X) = ca;
-      Ra(i_X, i_Y) = -sa;
-      Ra(i_Y, i_X) = sa;
-      Ra(i_Y, i_Y) = ca;
-      break;
-    }
+      case AXIS_X: {
+        Ra(i_Y, i_Y) = ca;
+        Ra(i_Y, i_Z) = -sa;
+        Ra(i_Z, i_Y) = sa;
+        Ra(i_Z, i_Z) = ca;
+        break;
+      }
+      case AXIS_Y: {
+        Ra(i_Z, i_Z) = ca;
+        Ra(i_Z, i_X) = -sa;
+        Ra(i_X, i_Z) = sa;
+        Ra(i_X, i_X) = ca;
+        break;
+      }
+      case AXIS_Z: {
+        Ra(i_X, i_X) = ca;
+        Ra(i_X, i_Y) = -sa;
+        Ra(i_Y, i_X) = sa;
+        Ra(i_Y, i_Y) = ca;
+        break;
+      }
     }
 
     sotDEBUG(15) << "R" << i << " = " << Ra;
diff --git a/src/python-module.cc b/src/python-module.cc
index 099ab666..16fb1f17 100644
--- a/src/python-module.cc
+++ b/src/python-module.cc
@@ -1,9 +1,9 @@
-#include "dynamic-graph/python/module.hh"
-#include "dynamic-graph/python/signal.hh"
-
 #include <sot/core/device.hh>
 #include <sot/core/flags.hh>
 
+#include "dynamic-graph/python/module.hh"
+#include "dynamic-graph/python/signal.hh"
+
 namespace dg = dynamicgraph;
 namespace dgs = dynamicgraph::sot;
 
@@ -46,11 +46,12 @@ BOOST_PYTHON_MODULE(wrap) {
            "Remove the signal to the refresh list", bp::arg("name"))
       .def("clear", &PeriodicCall::clear,
            "Clear all signals and commands from the refresh list.")
-      .def("__str__", +[](const PeriodicCall &e) {
-        std::ostringstream os;
-        e.display(os);
-        return os.str();
-      });
+      .def(
+          "__str__", +[](const PeriodicCall &e) {
+            std::ostringstream os;
+            e.display(os);
+            return os.str();
+          });
 
   dynamicgraph::python::exposeEntity<dgs::Device>()
       .add_property("after", bp::make_function(&dgs::Device::periodicCallAfter,
@@ -87,16 +88,18 @@ BOOST_PYTHON_MODULE(wrap) {
       .def("__bool__", &Flags::operator bool)
       .def("reversed", &Flags::operator!)
 
-      .def("set",
-           +[](Flags &f, const std::string &s) {
-             std::istringstream is(s);
-             is >> f;
-           })
-      .def("__str__", +[](const Flags &f) {
-        std::ostringstream os;
-        os << f;
-        return os.str();
-      });
+      .def(
+          "set",
+          +[](Flags &f, const std::string &s) {
+            std::istringstream is(s);
+            is >> f;
+          })
+      .def(
+          "__str__", +[](const Flags &f) {
+            std::ostringstream os;
+            os << f;
+            return os.str();
+          });
 
   dg::python::exposeSignalsOfType<Flags, int>("Flags");
 }
diff --git a/src/signal/signal-cast.cpp b/src/signal/signal-cast.cpp
index c20bf06e..f9407b22 100644
--- a/src/signal/signal-cast.cpp
+++ b/src/signal/signal-cast.cpp
@@ -7,18 +7,17 @@
  *
  */
 
-#include <Eigen/Core>
 #include <dynamic-graph/eigen-io.h>
-#include <dynamic-graph/signal-caster.h>
-#include <iomanip>
-#include <sot/core/matrix-geometry.hh>
-#include <sot/core/pool.hh>
-
 #include <dynamic-graph/signal-cast-helper.h>
 #include <dynamic-graph/signal-caster.h>
+
+#include <Eigen/Core>
+#include <iomanip>
 #include <sot/core/feature-abstract.hh>
 #include <sot/core/flags.hh>
+#include <sot/core/matrix-geometry.hh>
 #include <sot/core/multi-bound.hh>
+#include <sot/core/pool.hh>
 #include <sot/core/trajectory.hh>
 
 #ifdef WIN32
@@ -176,4 +175,4 @@ void SignalCast<VectorMultiBound>::trace(const VectorMultiBound &t,
 DG_ADD_CASTER(sot::VectorMultiBound, sotVMB);
 */
 
-} // namespace dynamicgraph
+}  // namespace dynamicgraph
diff --git a/src/sot/flags.cpp b/src/sot/flags.cpp
index 29a5642d..8744bb05 100644
--- a/src/sot/flags.cpp
+++ b/src/sot/flags.cpp
@@ -12,9 +12,10 @@
 /* --------------------------------------------------------------------- */
 
 /*! System framework */
-#include <list>
 #include <stdlib.h>
 
+#include <list>
+
 /*! Local Framework */
 #include <sot/core/debug.hh>
 #include <sot/core/flags.hh>
@@ -32,17 +33,17 @@ Flags::Flags(const char *_flags)
     : flags(strlen(_flags)), outOfRangeFlag(false) {
   for (unsigned int i = 0; i < flags.size(); ++i) {
     switch (_flags[i]) {
-    case '0':
-      flags[i] = false;
-      break;
-    case '1':
-      flags[i] = true;
-      break;
-    case ' ':
-      break;
-    default:
-      throw std::invalid_argument("Could not parse input string " +
-                                  std::string(_flags) + ". Expected 0 or 1.");
+      case '0':
+        flags[i] = false;
+        break;
+      case '1':
+        flags[i] = true;
+        break;
+      case ' ':
+        break;
+      default:
+        throw std::invalid_argument("Could not parse input string " +
+                                    std::string(_flags) + ". Expected 0 or 1.");
     }
   }
 }
@@ -51,19 +52,16 @@ Flags::Flags(const std::vector<bool> &_flags)
     : flags(_flags), outOfRangeFlag(false) {}
 
 Flags::operator bool(void) const {
-  if (outOfRangeFlag)
-    return true;
+  if (outOfRangeFlag) return true;
   for (unsigned int i = 0; i < flags.size(); ++i)
-    if (flags[i])
-      return true;
+    if (flags[i]) return true;
   return false;
 }
 
 /* --------------------------------------------------------------------- */
 
 bool Flags::operator()(const int &i) const {
-  if (i < (int)flags.size())
-    return flags[i];
+  if (i < (int)flags.size()) return flags[i];
   return outOfRangeFlag;
 }
 
@@ -72,13 +70,11 @@ void Flags::add(const bool &b) { flags.push_back(b); }
 
 /* --------------------------------------------------------------------- */
 void Flags::set(const unsigned int &idx) {
-  if (idx < flags.size())
-    flags[idx] = true;
+  if (idx < flags.size()) flags[idx] = true;
 }
 
 void Flags::unset(const unsigned int &idx) {
-  if (idx < flags.size())
-    flags[idx] = false;
+  if (idx < flags.size()) flags[idx] = false;
 }
 
 namespace dynamicgraph {
@@ -128,8 +124,7 @@ Flags &Flags::operator|=(const Flags &f2) {
 
 /* --------------------------------------------------------------------- */
 std::ostream &operator<<(std::ostream &os, const Flags &fl) {
-  for (auto f : fl.flags)
-    os << (f ? '1' : '0');
+  for (auto f : fl.flags) os << (f ? '1' : '0');
   return os;
 }
 
@@ -138,17 +133,17 @@ std::istream &operator>>(std::istream &is, Flags &fl) {
   fl.flags.clear();
   while (is.get(c).good()) {
     switch (c) {
-    case '0':
-      fl.flags.push_back(false);
-      break;
-    case '1':
-      fl.flags.push_back(true);
-      break;
-    case ' ':
-      break;
-    default:
-      throw std::invalid_argument("Could not parse input character " +
-                                  std::string(1, c) + ". Expected 0 or 1.");
+      case '0':
+        fl.flags.push_back(false);
+        break;
+      case '1':
+        fl.flags.push_back(true);
+        break;
+      case ' ':
+        break;
+      default:
+        throw std::invalid_argument("Could not parse input character " +
+                                    std::string(1, c) + ". Expected 0 or 1.");
     }
   }
   return is;
diff --git a/src/sot/memory-task-sot.cpp b/src/sot/memory-task-sot.cpp
index 07110b44..135276a1 100644
--- a/src/sot/memory-task-sot.cpp
+++ b/src/sot/memory-task-sot.cpp
@@ -29,11 +29,10 @@ void MemoryTaskSOT::initMemory(const Matrix::Index nJ, const Matrix::Index mJ) {
 
   svd = SVD_t(nJ, mJ, Eigen::ComputeThinU | Eigen::ComputeFullV);
   // If the constraint is well conditioned, the kernel can be pre-allocated.
-  if (mJ > nJ)
-    kernelMem.resize(mJ - nJ, mJ);
+  if (mJ > nJ) kernelMem.resize(mJ - nJ, mJ);
 
   JK.setZero();
   Jt.setZero();
 }
 
-void MemoryTaskSOT::display(std::ostream & /*os*/) const {} // TODO
+void MemoryTaskSOT::display(std::ostream& /*os*/) const {}  // TODO
diff --git a/src/sot/sot-command.h b/src/sot/sot-command.h
index 2b390a1c..c07608d8 100644
--- a/src/sot/sot-command.h
+++ b/src/sot/sot-command.h
@@ -9,12 +9,12 @@
 #ifndef SOT_COMMAND_H
 #define SOT_COMMAND_H
 
-#include <boost/assign/list_of.hpp>
-
 #include <dynamic-graph/command-getter.h>
 #include <dynamic-graph/command-setter.h>
 #include <dynamic-graph/command.h>
 
+#include <boost/assign/list_of.hpp>
+
 namespace dynamicgraph {
 namespace sot {
 namespace command {
@@ -24,7 +24,7 @@ using ::dynamicgraph::command::Value;
 
 // Command Push
 class Push : public Command {
-public:
+ public:
   virtual ~Push() {}
   /// Create command and store it in Entity
   /// \param entity instance of Entity owning this command
@@ -41,11 +41,11 @@ public:
     // return void
     return Value();
   }
-}; // class Push
+};  // class Push
 
 // Command Remove
 class Remove : public Command {
-public:
+ public:
   virtual ~Remove() {}
   /// Create command and store it in Entity
   /// \param entity instance of Entity owning this command
@@ -62,11 +62,11 @@ public:
     // return void
     return Value();
   }
-}; // class Remove
+};  // class Remove
 
 // Command Up
 class Up : public Command {
-public:
+ public:
   virtual ~Up() {}
   /// Create command and store it in Entity
   /// \param entity instance of Entity owning this command
@@ -83,11 +83,11 @@ public:
     // return void
     return Value();
   }
-}; // class Remove
+};  // class Remove
 
 // Command Down
 class Down : public Command {
-public:
+ public:
   virtual ~Down() {}
   /// Create command and store it in Entity
   /// \param entity instance of Entity owning this command
@@ -104,11 +104,11 @@ public:
     // return void
     return Value();
   }
-}; // class Down
+};  // class Down
 
 // Command Display
 class Display : public Command {
-public:
+ public:
   virtual ~Display() {}
   /// Create command and store it in Entity
   /// \param entity instance of Entity owning this command
@@ -123,11 +123,11 @@ public:
     // return the stack
     return Value(returnString.str());
   }
-}; // class Display
+};  // class Display
 
 // Command List
 class List : public Command {
-public:
+ public:
   virtual ~List() {}
   /// Create command and store it in Entity
   /// \param entity instance of Entity owning this command
@@ -150,11 +150,11 @@ public:
     // return the stack
     return Value(returnString.str());
   }
-}; // class List
+};  // class List
 
 // Command Clear
 class Clear : public Command {
-public:
+ public:
   virtual ~Clear() {}
   /// Clear the stack
   /// \param docstring documentation of the command
@@ -167,11 +167,11 @@ public:
     // return the stack
     return Value();
   }
-}; // class Clear
+};  // class Clear
 
-} // namespace classSot
-} // namespace command
+}  // namespace classSot
+}  // namespace command
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // SOT_COMMAND_H
+#endif  // SOT_COMMAND_H
diff --git a/src/sot/sot.cpp b/src/sot/sot.cpp
index 01a5c8a4..88ee365d 100644
--- a/src/sot/sot.cpp
+++ b/src/sot/sot.cpp
@@ -18,22 +18,22 @@
 /* SOT */
 #ifdef VP_DEBUG
 class sotSOT__INIT {
-public:
+ public:
   sotSOT__INIT(void) { dynamicgraph::sot::DebugTrace::openFile(); }
 };
 sotSOT__INIT sotSOT_initiator;
-#endif //#ifdef VP_DEBUG
-
-#include <sot/core/sot.hh>
+#endif  //#ifdef VP_DEBUG
 
 #include <dynamic-graph/command-direct-getter.h>
 #include <dynamic-graph/command-direct-setter.h>
+
 #include <sot/core/factory.hh>
 #include <sot/core/feature-posture.hh>
 #include <sot/core/matrix-geometry.hh>
 #include <sot/core/matrix-svd.hh>
 #include <sot/core/memory-task-sot.hh>
 #include <sot/core/pool.hh>
+#include <sot/core/sot.hh>
 #include <sot/core/task.hh>
 
 using namespace std;
@@ -50,17 +50,20 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(Sot, "SOT");
 
 const double Sot::INVERSION_THRESHOLD_DEFAULT = 1e-4;
 const Eigen::IOFormat python(Eigen::FullPrecision, 0,
-                             ", ",     // coeff sep
-                             ",\n",    // row sep
-                             "[", "]", // row prefix and suffix
-                             "[", "]"  // mat prefix and suffix
+                             ", ",      // coeff sep
+                             ",\n",     // row sep
+                             "[", "]",  // row prefix and suffix
+                             "[", "]"   // mat prefix and suffix
 );
 
 /* --------------------------------------------------------------------- */
 /* --- CONSTRUCTION ---------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 Sot::Sot(const std::string &name)
-    : Entity(name), stack(), nbJoints(0), enablePostureTaskAcceleration(false),
+    : Entity(name),
+      stack(),
+      nbJoints(0),
+      enablePostureTaskAcceleration(false),
       maxControlIncrementSquaredNorm(std::numeric_limits<double>::max()),
       q0SIN(NULL, "sotSOT(" + name + ")::input(double)::q0"),
       proj0SIN(NULL, "sotSOT(" + name + ")::input(double)::proj0"),
@@ -77,23 +80,25 @@ Sot::Sot(const std::string &name)
   //
   std::string docstring;
 
-  docstring = "    \n"
-              "    setNumberDofs.\n"
-              "    \n"
-              "      Input:\n"
-              "        - a positive integer : number of degrees of freedom of "
-              "the robot.\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    setNumberDofs.\n"
+      "    \n"
+      "      Input:\n"
+      "        - a positive integer : number of degrees of freedom of "
+      "the robot.\n"
+      "    \n";
   addCommand("setSize", new dynamicgraph::command::Setter<Sot, unsigned int>(
                             *this, &Sot::defineNbDof, docstring));
 
-  docstring = "    \n"
-              "    getNumberDofs.\n"
-              "    \n"
-              "      Output:\n"
-              "        - a positive integer : number of degrees of freedom of "
-              "the robot.\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    getNumberDofs.\n"
+      "    \n"
+      "      Output:\n"
+      "        - a positive integer : number of degrees of freedom of "
+      "the robot.\n"
+      "    \n";
   addCommand("getSize",
              new dynamicgraph::command::Getter<Sot, const unsigned int &>(
                  *this, &Sot::getNbDof, docstring));
@@ -116,15 +121,16 @@ Sot::Sot(const std::string &name)
                      "level",
                      "boolean")));
 
-  docstring = "    \n"
-              "    Maximum allowed squared norm of control increment.\n"
-              "    A task whose control increment is above this value is\n"
-              "    discarded. It defaults to the maximum double value.\n"
-              "    \n"
-              "    WARNING: This is a security feature and is **not** a good\n"
-              "             way of adding a proper constraint on the control\n"
-              "             generated by SoT.\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    Maximum allowed squared norm of control increment.\n"
+      "    A task whose control increment is above this value is\n"
+      "    discarded. It defaults to the maximum double value.\n"
+      "    \n"
+      "    WARNING: This is a security feature and is **not** a good\n"
+      "             way of adding a proper constraint on the control\n"
+      "             generated by SoT.\n"
+      "    \n";
 
   addCommand("setMaxControlIncrementSquaredNorm",
              dynamicgraph::command::makeDirectSetter(
@@ -140,54 +146,61 @@ Sot::Sot(const std::string &name)
                              "       - a double\n"
                              "    \n"));
 
-  docstring = "    \n"
-              "    push a task into the stack.\n"
-              "    \n"
-              "      Input:\n"
-              "        - a string : Name of the task.\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    push a task into the stack.\n"
+      "    \n"
+      "      Input:\n"
+      "        - a string : Name of the task.\n"
+      "    \n";
   addCommand("push", new command::classSot::Push(*this, docstring));
 
-  docstring = "    \n"
-              "    remove a task into the stack.\n"
-              "    \n"
-              "      Input:\n"
-              "        - a string : Name of the task.\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    remove a task into the stack.\n"
+      "    \n"
+      "      Input:\n"
+      "        - a string : Name of the task.\n"
+      "    \n";
   addCommand("remove", new command::classSot::Remove(*this, docstring));
 
-  docstring = "    \n"
-              "    up a task into the stack.\n"
-              "    \n"
-              "      Input:\n"
-              "        - a string : Name of the task.\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    up a task into the stack.\n"
+      "    \n"
+      "      Input:\n"
+      "        - a string : Name of the task.\n"
+      "    \n";
   addCommand("up", new command::classSot::Up(*this, docstring));
 
-  docstring = "    \n"
-              "    down a task into the stack.\n"
-              "    \n"
-              "      Input:\n"
-              "        - a string : Name of the task.\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    down a task into the stack.\n"
+      "    \n"
+      "      Input:\n"
+      "        - a string : Name of the task.\n"
+      "    \n";
   addCommand("down", new command::classSot::Down(*this, docstring));
 
   // Display
-  docstring = "    \n"
-              "    display the list of tasks pushed inside the stack.\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    display the list of tasks pushed inside the stack.\n"
+      "    \n";
   addCommand("display", new command::classSot::Display(*this, docstring));
 
   // Clear
-  docstring = "    \n"
-              "    clear the list of tasks pushed inside the stack.\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    clear the list of tasks pushed inside the stack.\n"
+      "    \n";
   addCommand("clear", new command::classSot::Clear(*this, docstring));
 
   // List
-  docstring = "    \n"
-              "    returns the list of tasks pushed inside the stack.\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    returns the list of tasks pushed inside the stack.\n"
+      "    \n";
   addCommand("list", new command::classSot::List(*this, docstring));
 }
 
@@ -321,8 +334,7 @@ const Matrix &computeJacobianActivated(TaskAbstract *Ta, Task *T, Matrix &Jmem,
       if (!controlSelec) {
         Jmem = Ta->jacobianSOUT.accessCopy();
         for (int i = 0; i < Jmem.cols(); ++i)
-          if (!controlSelec(i))
-            Jmem.col(i).setZero();
+          if (!controlSelec(i)) Jmem.col(i).setZero();
         return Jmem;
       } else
         return Ta->jacobianSOUT.accessCopy();
@@ -367,8 +379,7 @@ bool updateControl(MemoryTaskSOT *mem, const Matrix::Index rankJ,
     tmpControl.noalias() = kernel * tmpVar.head(kernel.cols());
   } else
     tmpControl.noalias() = svd.matrixV().leftCols(rankJ) * tmpTask.head(rankJ);
-  if (tmpControl.squaredNorm() > threshold)
-    return false;
+  if (tmpControl.squaredNorm() > threshold) return false;
   control += tmpControl;
   return true;
 }
@@ -389,8 +400,7 @@ MemoryTaskSOT *getMemory(TaskAbstract &t, const Matrix::Index &tDim,
                          const Matrix::Index &nDof) {
   MemoryTaskSOT *mem = dynamic_cast<MemoryTaskSOT *>(t.memoryInternal);
   if (NULL == mem) {
-    if (NULL != t.memoryInternal)
-      delete t.memoryInternal;
+    if (NULL != t.memoryInternal) delete t.memoryInternal;
     mem = new MemoryTaskSOT(tDim, nDof);
     t.memoryInternal = mem;
   }
@@ -413,28 +423,28 @@ MemoryTaskSOT *getMemory(TaskAbstract &t, const Matrix::Index &tDim,
 
 #ifdef WITH_CHRONO
 #define TIME_STREAM DYNAMIC_GRAPH_ENTITY_DEBUG(*this)
-#define sotINIT_CHRONO1                                                        \
-  struct timespec t0, t1;                                                      \
+#define sotINIT_CHRONO1   \
+  struct timespec t0, t1; \
   double dt
 #define sotSTART_CHRONO1 clock_gettime(CLOCK_THREAD_CPUTIME_ID, &t0)
-#define sotCHRONO1                                                             \
-  clock_gettime(CLOCK_THREAD_CPUTIME_ID, &t1);                                 \
-  dt = ((double)(t1.tv_sec - t0.tv_sec) * 1e6 +                                \
-        (double)(t1.tv_nsec - t0.tv_nsec) / 1e3);                              \
+#define sotCHRONO1                                \
+  clock_gettime(CLOCK_THREAD_CPUTIME_ID, &t1);    \
+  dt = ((double)(t1.tv_sec - t0.tv_sec) * 1e6 +   \
+        (double)(t1.tv_nsec - t0.tv_nsec) / 1e3); \
   TIME_STREAM << "dT " << (long int)dt << std::endl
 #define sotINITPARTCOUNTERS struct timespec tpart0
 #define sotSTARTPARTCOUNTERS clock_gettime(CLOCK_THREAD_CPUTIME_ID, &tpart0)
-#define sotCOUNTER(nbc1, nbc2)                                                 \
-  clock_gettime(CLOCK_THREAD_CPUTIME_ID, &tpart##nbc2);                        \
-  dt##nbc2 = ((double)(tpart##nbc2.tv_sec - tpart##nbc1.tv_sec) * 1e6 +        \
+#define sotCOUNTER(nbc1, nbc2)                                          \
+  clock_gettime(CLOCK_THREAD_CPUTIME_ID, &tpart##nbc2);                 \
+  dt##nbc2 = ((double)(tpart##nbc2.tv_sec - tpart##nbc1.tv_sec) * 1e6 + \
               (double)(tpart##nbc2.tv_nsec - tpart##nbc1.tv_nsec) / 1e3)
-#define sotINITCOUNTER(nbc1)                                                   \
-  struct timespec tpart##nbc1;                                                 \
+#define sotINITCOUNTER(nbc1)   \
+  struct timespec tpart##nbc1; \
   double dt##nbc1 = 0;
-#define sotPRINTCOUNTER(nbc1)                                                  \
-  TIME_STREAM << "dt" << iterTask << '_' << nbc1 << ' ' << (long int)dt##nbc1  \
+#define sotPRINTCOUNTER(nbc1)                                                 \
+  TIME_STREAM << "dt" << iterTask << '_' << nbc1 << ' ' << (long int)dt##nbc1 \
               << ' '
-#else // #ifdef  WITH_CHRONO
+#else  // #ifdef  WITH_CHRONO
 #define sotINIT_CHRONO1
 #define sotSTART_CHRONO1
 #define sotCHRONO1
@@ -443,7 +453,7 @@ MemoryTaskSOT *getMemory(TaskAbstract &t, const Matrix::Index &tDim,
 #define sotCOUNTER(nbc1, nbc2)
 #define sotINITCOUNTER(nbc1)
 #define sotPRINTCOUNTER(nbc1)
-#endif // #ifdef  WITH_CHRONO
+#endif  // #ifdef  WITH_CHRONO
 
 void Sot::taskVectorToMlVector(const VectorMultiBound &taskVector,
                                Vector &res) {
@@ -524,30 +534,28 @@ dynamicgraph::Vector &Sot::computeControlLaw(dynamicgraph::Vector &control,
     sotDEBUG(15) << "Task: e_" << taskA.getName() << std::endl;
 
     /// Computing first the jacobian may be a little faster overall.
-    if (!fullPostureTask)
-      taskA.jacobianSOUT.recompute(iterTime);
+    if (!fullPostureTask) taskA.jacobianSOUT.recompute(iterTime);
     taskA.taskSOUT.recompute(iterTime);
     const Matrix::Index dim = taskA.taskSOUT.accessCopy().size();
-    sotCOUNTER(0, 1); // Direct Dynamic
+    sotCOUNTER(0, 1);  // Direct Dynamic
 
     /* Init memory. */
     MemoryTaskSOT *mem = getMemory(taskA, dim, nbJoints);
-    /***/ sotCOUNTER(1, 2); // first allocs
+    /***/ sotCOUNTER(1, 2);  // first allocs
 
     Matrix::Index rankJ = -1;
     taskVectorToMlVector(taskA.taskSOUT(iterTime), mem->err);
 
     if (fullPostureTask) {
-      /***/ sotCOUNTER(2, 3); // compute JK*S
-      /***/ sotCOUNTER(3, 4); // compute Jt
+      /***/ sotCOUNTER(2, 3);  // compute JK*S
+      /***/ sotCOUNTER(3, 4);  // compute Jt
 
       // Jp = kernel.transpose()
       rankJ = kernel.cols();
-      /***/ sotCOUNTER(4, 5); // SVD and rank
+      /***/ sotCOUNTER(4, 5);  // SVD and rank
 
       /* --- COMPUTE QDOT AND P --- */
-      if (!controlIsZero)
-        mem->err.noalias() -= control.tail(nbJoints - 6);
+      if (!controlIsZero) mem->err.noalias() -= control.tail(nbJoints - 6);
       mem->tmpVar.head(rankJ).noalias() =
           kernel.transpose().rightCols(nbJoints - 6) * mem->err;
       control.noalias() += kernel * mem->tmpVar.head(rankJ);
@@ -558,7 +566,7 @@ dynamicgraph::Vector &Sot::computeControlLaw(dynamicgraph::Vector &control,
       /* --- COMPUTE S * JK --- */
       const Matrix &JK =
           computeJacobianActivated(&taskA, task, mem->JK, iterTime);
-      /***/ sotCOUNTER(2, 3); // compute JK*S
+      /***/ sotCOUNTER(2, 3);  // compute JK*S
 
       /* --- COMPUTE Jt --- */
       const Matrix *Jt = &mem->Jt;
@@ -566,7 +574,7 @@ dynamicgraph::Vector &Sot::computeControlLaw(dynamicgraph::Vector &control,
         mem->Jt.noalias() = JK * kernel;
       else
         Jt = &JK;
-      /***/ sotCOUNTER(3, 4); // compute Jt
+      /***/ sotCOUNTER(3, 4);  // compute Jt
 
       /* --- SVD and RANK--- */
       SVD_t &svd = mem->svd;
@@ -578,11 +586,10 @@ dynamicgraph::Vector &Sot::computeControlLaw(dynamicgraph::Vector &control,
       while (rankJ < svd.singularValues().size() &&
              th < svd.singularValues()[rankJ])
         ++rankJ;
-      /***/ sotCOUNTER(4, 5); // SVD and rank
+      /***/ sotCOUNTER(4, 5);  // SVD and rank
 
       /* --- COMPUTE QDOT AND P --- */
-      if (!controlIsZero)
-        mem->err.noalias() -= JK * control;
+      if (!controlIsZero) mem->err.noalias() -= JK * control;
 
       bool success = updateControl(mem, rankJ, has_kernel, kernel, control,
                                    maxControlIncrementSquaredNorm);
@@ -613,7 +620,7 @@ dynamicgraph::Vector &Sot::computeControlLaw(dynamicgraph::Vector &control,
             << mem->tmpControl.transpose().format(python) << '\n';
       }
     }
-    /***/ sotCOUNTER(5, 6); // QDOT + Projector
+    /***/ sotCOUNTER(5, 6);  // QDOT + Projector
 
     sotDEBUG(2) << "Proj non optimal (rankJ= " << rankJ
                 << ", iterTask =" << iterTask << ")";
@@ -626,8 +633,7 @@ dynamicgraph::Vector &Sot::computeControlLaw(dynamicgraph::Vector &control,
     sotPRINTCOUNTER(4);
     sotPRINTCOUNTER(5);
     sotPRINTCOUNTER(6);
-    if (last || kernel.cols() == 0)
-      break;
+    if (last || kernel.cols() == 0) break;
   }
 
   sotCHRONO1;
@@ -640,7 +646,6 @@ dynamicgraph::Vector &Sot::computeControlLaw(dynamicgraph::Vector &control,
 /* --- DISPLAY --------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 void Sot::display(std::ostream &os) const {
-
   os << "+-----------------" << std::endl
      << "+   SOT     " << std::endl
      << "+-----------------" << std::endl;
diff --git a/src/task/gain-adaptive.cpp b/src/task/gain-adaptive.cpp
index 0fab95c7..1acfce74 100644
--- a/src/task/gain-adaptive.cpp
+++ b/src/task/gain-adaptive.cpp
@@ -13,14 +13,12 @@
 /* --------------------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
+#include <dynamic-graph/command-bind.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/exception-signal.hh>
 #include <sot/core/factory.hh>
 
-#include <sot/core/debug.hh>
-
-#include <dynamic-graph/command-bind.h>
-
 using namespace dynamicgraph::sot;
 using namespace dynamicgraph;
 
@@ -34,11 +32,11 @@ const double GainAdaptive::TAN_DEFAULT = 1;
 /* --------------------------------------------------------------------- */
 /* --------------------------------------------------------------------- */
 
-#define __SOT_GAIN_ADAPTATIVE_INIT                                             \
-  Entity(name), coeff_a(0), coeff_b(0), coeff_c(0),                            \
-      errorSIN(NULL, "sotGainAdaptive(" + name + ")::input(vector)::error"),   \
-      gainSOUT(boost::bind(&GainAdaptive::computeGain, this, _1, _2),          \
-               errorSIN,                                                       \
+#define __SOT_GAIN_ADAPTATIVE_INIT                                           \
+  Entity(name), coeff_a(0), coeff_b(0), coeff_c(0),                          \
+      errorSIN(NULL, "sotGainAdaptive(" + name + ")::input(vector)::error"), \
+      gainSOUT(boost::bind(&GainAdaptive::computeGain, this, _1, _2),        \
+               errorSIN,                                                     \
                "sotGainAdaptive(" + name + ")::output(double)::gain")
 
 void GainAdaptive::addCommands() {
@@ -56,22 +54,24 @@ void GainAdaptive::addCommands() {
              makeCommandVoid1(*this, &GainAdaptive::init, docstring));
 
   // Command Set
-  docstring = "    \n"
-              "    set\n"
-              "      Input:\n"
-              "        floating point value: value at 0,\n"
-              "        floating point value: value at infinity,\n"
-              "        floating point value: value at slope,\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    set\n"
+      "      Input:\n"
+      "        floating point value: value at 0,\n"
+      "        floating point value: value at infinity,\n"
+      "        floating point value: value at slope,\n"
+      "    \n";
   addCommand("set", makeCommandVoid3(*this, &GainAdaptive::init, docstring));
-  docstring = "    \n"
-              "    set from value at 0 and infinity, with a passing point\n"
-              "      Input:\n"
-              "        floating point value: value at 0,\n"
-              "        floating point value: value at infinity,\n"
-              "        floating point value: reference point,\n"
-              "        floating point value: percentage at ref point.\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    set from value at 0 and infinity, with a passing point\n"
+      "      Input:\n"
+      "        floating point value: value at 0,\n"
+      "        floating point value: value at infinity,\n"
+      "        floating point value: reference point,\n"
+      "        floating point value: percentage at ref point.\n"
+      "    \n";
   addCommand(
       "setByPoint",
       makeCommandVoid4(*this, &GainAdaptive::initFromPassingPoint, docstring));
@@ -133,7 +133,7 @@ void GainAdaptive::init(const double &valueAt0, const double &valueAtInfty,
 void GainAdaptive::initFromPassingPoint(const double &valueAt0,
                                         const double &valueAtInfty,
                                         const double &xref,
-                                        const double &p) // gref )
+                                        const double &p)  // gref )
 {
   coeff_c = valueAtInfty;
   coeff_a = valueAt0 - valueAtInfty;
diff --git a/src/task/multi-bound.cpp b/src/task/multi-bound.cpp
index 2590b4e8..650d1324 100644
--- a/src/task/multi-bound.cpp
+++ b/src/task/multi-bound.cpp
@@ -14,22 +14,36 @@
 using namespace dynamicgraph::sot;
 
 MultiBound::MultiBound(const double x)
-    : mode(MODE_SINGLE), boundSingle(x), boundSup(0), boundInf(0),
-      boundSupSetup(false), boundInfSetup(false) {}
+    : mode(MODE_SINGLE),
+      boundSingle(x),
+      boundSup(0),
+      boundInf(0),
+      boundSupSetup(false),
+      boundInfSetup(false) {}
 
 MultiBound::MultiBound(const double xi, const double xs)
-    : mode(MODE_DOUBLE), boundSingle(0), boundSup(xs), boundInf(xi),
-      boundSupSetup(true), boundInfSetup(true) {}
+    : mode(MODE_DOUBLE),
+      boundSingle(0),
+      boundSup(xs),
+      boundInf(xi),
+      boundSupSetup(true),
+      boundInfSetup(true) {}
 
 MultiBound::MultiBound(const double x, const MultiBound::SupInfType bound)
-    : mode(MODE_DOUBLE), boundSingle(0), boundSup((bound == BOUND_SUP) ? x : 0),
-      boundInf((bound == BOUND_INF) ? x : 0), boundSupSetup(bound == BOUND_SUP),
+    : mode(MODE_DOUBLE),
+      boundSingle(0),
+      boundSup((bound == BOUND_SUP) ? x : 0),
+      boundInf((bound == BOUND_INF) ? x : 0),
+      boundSupSetup(bound == BOUND_SUP),
       boundInfSetup(bound == BOUND_INF) {}
 
 MultiBound::MultiBound(const MultiBound &clone)
-    : mode(clone.mode), boundSingle(clone.boundSingle),
-      boundSup(clone.boundSup), boundInf(clone.boundInf),
-      boundSupSetup(clone.boundSupSetup), boundInfSetup(clone.boundInfSetup) {}
+    : mode(clone.mode),
+      boundSingle(clone.boundSingle),
+      boundSup(clone.boundSup),
+      boundInf(clone.boundInf),
+      boundSupSetup(clone.boundSupSetup),
+      boundInfSetup(clone.boundInfSetup) {}
 
 MultiBound::MultiBoundModeType MultiBound::getMode(void) const { return mode; }
 double MultiBound::getSingleBound(void) const {
@@ -45,20 +59,20 @@ double MultiBound::getDoubleBound(const MultiBound::SupInfType bound) const {
                             "Accessing double bound of a non-double type.");
   }
   switch (bound) {
-  case BOUND_SUP: {
-    if (!boundSupSetup) {
-      SOT_THROW ExceptionTask(ExceptionTask::BOUND_TYPE,
-                              "Accessing un-setup sup bound.");
+    case BOUND_SUP: {
+      if (!boundSupSetup) {
+        SOT_THROW ExceptionTask(ExceptionTask::BOUND_TYPE,
+                                "Accessing un-setup sup bound.");
+      }
+      return boundSup;
     }
-    return boundSup;
-  }
-  case BOUND_INF: {
-    if (!boundInfSetup) {
-      SOT_THROW ExceptionTask(ExceptionTask::BOUND_TYPE,
-                              "Accessing un-setup inf bound");
+    case BOUND_INF: {
+      if (!boundInfSetup) {
+        SOT_THROW ExceptionTask(ExceptionTask::BOUND_TYPE,
+                                "Accessing un-setup inf bound");
+      }
+      return boundInf;
     }
-    return boundInf;
-  }
   }
   return 0;
 }
@@ -68,10 +82,10 @@ bool MultiBound::getDoubleBoundSetup(const MultiBound::SupInfType bound) const {
                             "Accessing double bound of a non-double type.");
   }
   switch (bound) {
-  case BOUND_SUP:
-    return boundSupSetup;
-  case BOUND_INF:
-    return boundInfSetup;
+    case BOUND_SUP:
+      return boundSupSetup;
+    case BOUND_INF:
+      return boundInfSetup;
   }
   return false;
 }
@@ -82,14 +96,14 @@ void MultiBound::setDoubleBound(SupInfType boundType, double boundValue) {
     boundInfSetup = false;
   }
   switch (boundType) {
-  case BOUND_INF:
-    boundInfSetup = true;
-    boundInf = boundValue;
-    break;
-  case BOUND_SUP:
-    boundSupSetup = true;
-    boundSup = boundValue;
-    break;
+    case BOUND_INF:
+      boundInfSetup = true;
+      boundInf = boundValue;
+      break;
+    case BOUND_SUP:
+      boundSupSetup = true;
+      boundSup = boundValue;
+      break;
   }
 }
 void MultiBound::unsetDoubleBound(SupInfType boundType) {
@@ -99,12 +113,12 @@ void MultiBound::unsetDoubleBound(SupInfType boundType) {
     boundInfSetup = false;
   } else {
     switch (boundType) {
-    case BOUND_INF:
-      boundInfSetup = false;
-      break;
-    case BOUND_SUP:
-      boundSupSetup = false;
-      break;
+      case BOUND_INF:
+        boundInfSetup = false;
+        break;
+      case BOUND_SUP:
+        boundSupSetup = false;
+        break;
     }
   }
 }
@@ -131,24 +145,24 @@ namespace sot {
 
 std::ostream &operator<<(std::ostream &os, const MultiBound &m) {
   switch (m.mode) {
-  case MultiBound::MODE_SINGLE: {
-    os << m.boundSingle;
-    break;
-  }
-  case MultiBound::MODE_DOUBLE: {
-    os << "(";
-    if (m.boundInfSetup)
-      os << m.boundInf;
-    else
-      os << "--";
-    os << ",";
-    if (m.boundSupSetup)
-      os << m.boundSup;
-    else
-      os << "--";
-    os << ")";
-    break;
-  }
+    case MultiBound::MODE_SINGLE: {
+      os << m.boundSingle;
+      break;
+    }
+    case MultiBound::MODE_DOUBLE: {
+      os << "(";
+      if (m.boundInfSetup)
+        os << m.boundInf;
+      else
+        os << "--";
+      os << ",";
+      if (m.boundSupSetup)
+        os << m.boundSup;
+      else
+        os << "--";
+      os << ")";
+      break;
+    }
   }
   return os;
 }
@@ -215,8 +229,7 @@ std::ostream &operator<<(std::ostream &os, const VectorMultiBound &v) {
   os << "[" << v.size() << "](";
   for (VectorMultiBound::const_iterator iter = v.begin(); iter != v.end();
        ++iter) {
-    if (iter != v.begin())
-      os << ",";
+    if (iter != v.begin()) os << ",";
     os << (*iter);
   }
   return os << ")";
diff --git a/src/task/task-abstract.cpp b/src/task/task-abstract.cpp
index 2c9fafd1..7070b939 100644
--- a/src/task/task-abstract.cpp
+++ b/src/task/task-abstract.cpp
@@ -23,7 +23,8 @@ using namespace dynamicgraph;
 /* --------------------------------------------------------------------- */
 
 TaskAbstract::TaskAbstract(const std::string &n)
-    : Entity(n), memoryInternal(NULL),
+    : Entity(n),
+      memoryInternal(NULL),
       taskSOUT("sotTaskAbstract(" + n + ")::output(vector)::task"),
       jacobianSOUT("sotTaskAbstract(" + n + ")::output(matrix)::jacobian") {
   taskRegistration();
diff --git a/src/task/task-command.h b/src/task/task-command.h
index 04704c07..be34bbbb 100644
--- a/src/task/task-command.h
+++ b/src/task/task-command.h
@@ -9,12 +9,12 @@
 #ifndef TASK_COMMAND_H
 #define TASK_COMMAND_H
 
-#include <boost/assign/list_of.hpp>
-
 #include <dynamic-graph/command-getter.h>
 #include <dynamic-graph/command-setter.h>
 #include <dynamic-graph/command.h>
 
+#include <boost/assign/list_of.hpp>
+
 namespace dynamicgraph {
 namespace sot {
 namespace command {
@@ -24,7 +24,7 @@ using ::dynamicgraph::command::Value;
 
 // Command ListFeatures
 class ListFeatures : public Command {
-public:
+ public:
   virtual ~ListFeatures() {}
   /// Create command and store it in Entity
   /// \param entity instance of Entity owning this command
@@ -42,10 +42,10 @@ public:
     result += "]";
     return Value(result);
   }
-}; // class ListFeatures
-} // namespace task
-} // namespace command
+};  // class ListFeatures
+}  // namespace task
+}  // namespace command
 } /* namespace sot */
 } /* namespace dynamicgraph */
 
-#endif // TASK_COMMAND_H
+#endif  // TASK_COMMAND_H
diff --git a/src/task/task-conti.cpp b/src/task/task-conti.cpp
index 986e2275..4129f95e 100644
--- a/src/task/task-conti.cpp
+++ b/src/task/task-conti.cpp
@@ -13,6 +13,7 @@
 
 /* SOT */
 #include <dynamic-graph/linear-algebra.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/factory.hh>
 #include <sot/core/task-conti.hh>
@@ -28,16 +29,17 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(TaskConti, "TaskConti");
 /* --------------------------------------------------------------------- */
 
 TaskConti::TaskConti(const std::string &n)
-    : Task(n), timeRef(TIME_REF_UNSIGNIFICANT), mu(0),
+    : Task(n),
+      timeRef(TIME_REF_UNSIGNIFICANT),
+      mu(0),
       controlPrevSIN(NULL, "sotTaskConti(" + n + ")::input(double)::q0") {
   taskSOUT.setFunction(
       boost::bind(&TaskConti::computeContiDesiredVelocity, this, _1, _2));
   signalRegistration(controlPrevSIN);
 }
 
-VectorMultiBound &
-TaskConti::computeContiDesiredVelocity(VectorMultiBound &desvel2b,
-                                       const int &timecurr) {
+VectorMultiBound &TaskConti::computeContiDesiredVelocity(
+    VectorMultiBound &desvel2b, const int &timecurr) {
   sotDEBUG(15) << "# In {" << endl;
 
   dynamicgraph::Vector desvel = errorSOUT(timecurr);
@@ -49,12 +51,10 @@ TaskConti::computeContiDesiredVelocity(VectorMultiBound &desvel2b,
     dynamicgraph::Vector deref(J.rows());
     sotDEBUG(15) << "q0 = " << q0 << std::endl;
     sotDEBUG(25) << "J = " << J << std::endl;
-    if (q0.size() != (J.cols() - 6))
-      throw; // TODO
+    if (q0.size() != (J.cols() - 6)) throw;  // TODO
     for (int i = 0; i < J.rows(); ++i) {
       deref(i) = 0;
-      for (int j = 6; j < J.cols(); ++j)
-        deref(i) += J(i, j) * q0(j - 6);
+      for (int j = 6; j < J.cols(); ++j) deref(i) += J(i, j) * q0(j - 6);
     }
 
     if (timeRef == TIME_REF_TO_BE_SET) {
@@ -82,8 +82,7 @@ TaskConti::computeContiDesiredVelocity(VectorMultiBound &desvel2b,
     sotDEBUG(25) << "task: " << desvel << std::endl;
 
     desvel2b.resize(desvel.size());
-    for (int i = 0; i < desvel.size(); ++i)
-      desvel2b[i] = desvel(i);
+    for (int i = 0; i < desvel.size(); ++i) desvel2b[i] = desvel(i);
 
     sotDEBUG(15) << "# Out }" << endl;
     return desvel2b;
@@ -91,8 +90,7 @@ TaskConti::computeContiDesiredVelocity(VectorMultiBound &desvel2b,
     const dynamicgraph::Vector &desvel = errorSOUT(timecurr);
     const double &gain = controlGainSIN(timecurr);
     desvel2b.resize(desvel.size());
-    for (int i = 0; i < desvel.size(); ++i)
-      desvel2b[i] = -gain * desvel(i);
+    for (int i = 0; i < desvel.size(); ++i) desvel2b[i] = -gain * desvel(i);
     return desvel2b;
   }
 }
diff --git a/src/task/task-pd.cpp b/src/task/task-pd.cpp
index b47fcdf2..73d2aebb 100644
--- a/src/task/task-pd.cpp
+++ b/src/task/task-pd.cpp
@@ -13,6 +13,7 @@
 
 /* SOT */
 #include <dynamic-graph/all-commands.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/task-pd.hh>
 
@@ -29,7 +30,9 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(TaskPD, "TaskPD");
 /* --------------------------------------------------------------------- */
 
 TaskPD::TaskPD(const std::string &n)
-    : Task(n), previousError(), beta(1),
+    : Task(n),
+      previousError(),
+      beta(1),
       errorDotSOUT(boost::bind(&TaskPD::computeErrorDot, this, _1, _2),
                    errorSOUT,
                    "sotTaskPD(" + n + ")::output(vector)::errorDotOUT"),
diff --git a/src/task/task-unilateral.cpp b/src/task/task-unilateral.cpp
index e8cf9f8f..e09db949 100644
--- a/src/task/task-unilateral.cpp
+++ b/src/task/task-unilateral.cpp
@@ -30,13 +30,14 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(TaskUnilateral, "TaskUnilateral");
 /* --------------------------------------------------------------------- */
 
 TaskUnilateral::TaskUnilateral(const std::string &n)
-    : Task(n), featureList(),
+    : Task(n),
+      featureList(),
       positionSIN(NULL,
                   "sotTaskUnilateral(" + n + ")::input(vector)::position"),
-      referenceInfSIN(NULL, "sotTaskUnilateral(" + n +
-                                ")::input(vector)::referenceInf"),
-      referenceSupSIN(NULL, "sotTaskUnilateral(" + n +
-                                ")::input(vector)::referenceSup"),
+      referenceInfSIN(
+          NULL, "sotTaskUnilateral(" + n + ")::input(vector)::referenceInf"),
+      referenceSupSIN(
+          NULL, "sotTaskUnilateral(" + n + ")::input(vector)::referenceSup"),
       dtSIN(NULL, "sotTaskUnilateral(" + n + ")::input(double)::dt") {
   taskSOUT.setFunction(
       boost::bind(&TaskUnilateral::computeTaskUnilateral, this, _1, _2));
diff --git a/src/task/task.cpp b/src/task/task.cpp
index 80bad033..7bf4f65c 100644
--- a/src/task/task.cpp
+++ b/src/task/task.cpp
@@ -12,12 +12,13 @@
 /* --------------------------------------------------------------------- */
 
 /* SOT */
+#include <dynamic-graph/all-commands.h>
+
 #include <sot/core/debug.hh>
+#include <sot/core/pool.hh>
 #include <sot/core/task.hh>
 
 #include "../src/task/task-command.h"
-#include <dynamic-graph/all-commands.h>
-#include <sot/core/pool.hh>
 
 using namespace std;
 using namespace dynamicgraph::sot;
@@ -31,7 +32,9 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(Task, "Task");
 /* --------------------------------------------------------------------- */
 
 Task::Task(const std::string &n)
-    : TaskAbstract(n), featureList(), withDerivative(false),
+    : TaskAbstract(n),
+      featureList(),
+      withDerivative(false),
       controlGainSIN(NULL, "sotTask(" + n + ")::input(double)::controlGain"),
       dampingGainSINOUT(NULL, "sotTask(" + n + ")::in/output(double)::damping")
       // TODO As far as I understand, this is not used in this class.
@@ -69,12 +72,13 @@ void Task::initCommands(void) {
   //
   std::string docstring;
   // AddFeature
-  docstring = "    \n"
-              "    Add a feature to the task\n"
-              "    \n"
-              "      Input:\n"
-              "        - name of the feature\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    Add a feature to the task\n"
+      "    \n"
+      "      Input:\n"
+      "        - name of the feature\n"
+      "    \n";
   addCommand("add",
              makeCommandVoid1(*this, &Task::addFeatureFromName, docstring));
 
@@ -85,16 +89,18 @@ void Task::initCommands(void) {
              makeDirectGetter(*this, &withDerivative,
                               docDirectGetter("withDerivative", "bool")));
   // ClearFeatureList
-  docstring = "    \n"
-              "    Clear the list of features of the task\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    Clear the list of features of the task\n"
+      "    \n";
 
   addCommand("clear",
              makeCommandVoid0(*this, &Task::clearFeatureList, docstring));
   // List features
-  docstring = "    \n"
-              "    Returns the list of features of the task\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    Returns the list of features of the task\n"
+      "    \n";
 
   addCommand("list", new command::task::ListFeatures(*this, docstring));
 }
@@ -113,7 +119,6 @@ void Task::addFeatureFromName(const std::string &featureName) {
 }
 
 void Task::clearFeatureList(void) {
-
   for (FeatureList_t::iterator iter = featureList.begin();
        iter != featureList.end(); ++iter) {
     FeatureAbstract &s = **iter;
@@ -183,7 +188,7 @@ dynamicgraph::Vector &Task::computeError(dynamicgraph::Vector &error,
       const dynamicgraph::Vector &partialError = feature.errorSOUT(time);
 
       const dynamicgraph::Vector::Index dim = partialError.size();
-      while (cursorError + dim > dimError) // DEBUG It was >=
+      while (cursorError + dim > dimError)  // DEBUG It was >=
       {
         dimError *= 2;
         error.resize(dimError);
@@ -206,8 +211,8 @@ dynamicgraph::Vector &Task::computeError(dynamicgraph::Vector &error,
   return error;
 }
 
-dynamicgraph::Vector &
-Task::computeErrorTimeDerivative(dynamicgraph::Vector &res, int time) {
+dynamicgraph::Vector &Task::computeErrorTimeDerivative(
+    dynamicgraph::Vector &res, int time) {
   res.resize(errorSOUT(time).size());
   dynamicgraph::Vector::Index cursor = 0;
 
@@ -224,8 +229,8 @@ Task::computeErrorTimeDerivative(dynamicgraph::Vector &res, int time) {
   return res;
 }
 
-VectorMultiBound &
-Task::computeTaskExponentialDecrease(VectorMultiBound &errorRef, int time) {
+VectorMultiBound &Task::computeTaskExponentialDecrease(
+    VectorMultiBound &errorRef, int time) {
   sotDEBUG(15) << "# In {" << endl;
   const dynamicgraph::Vector &errSingleBound = errorSOUT(time);
   const double &gain = controlGainSIN(time);
diff --git a/src/tools/binary-int-to-uint.cpp b/src/tools/binary-int-to-uint.cpp
index 531fc0cc..6e1f74be 100644
--- a/src/tools/binary-int-to-uint.cpp
+++ b/src/tools/binary-int-to-uint.cpp
@@ -28,10 +28,10 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(BinaryIntToUint, "BinaryIntToUint");
 BinaryIntToUint::BinaryIntToUint(const string &fname)
     : Entity(fname),
       binaryIntSIN(NULL, "BinaryIntToUint(" + name + ")::input(int)::sin"),
-      binaryUintSOUT(boost::bind(&BinaryIntToUint::computeOutput, this, _1, _2),
-                     binaryIntSIN,
-                     "BinaryIntToUint(" + name +
-                         ")::output(unsigned int)::sout") {
+      binaryUintSOUT(
+          boost::bind(&BinaryIntToUint::computeOutput, this, _1, _2),
+          binaryIntSIN,
+          "BinaryIntToUint(" + name + ")::output(unsigned int)::sout") {
   signalRegistration(binaryIntSIN << binaryUintSOUT);
 }
 
diff --git a/src/tools/clamp-workspace.cpp b/src/tools/clamp-workspace.cpp
index 11a62111..02c73d26 100644
--- a/src/tools/clamp-workspace.cpp
+++ b/src/tools/clamp-workspace.cpp
@@ -8,7 +8,6 @@
  */
 
 #include <cmath>
-
 #include <sot/core/clamp-workspace.hh>
 
 using namespace std;
@@ -21,8 +20,9 @@ using namespace dynamicgraph;
 DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(ClampWorkspace, "ClampWorkspace");
 
 ClampWorkspace::ClampWorkspace(const string &fName)
-    : Entity(fName), positionrefSIN(NULL, "ClampWorkspace(" + name +
-                                              ")::input(double)::positionref"),
+    : Entity(fName),
+      positionrefSIN(
+          NULL, "ClampWorkspace(" + name + ")::input(double)::positionref"),
       positionSIN(NULL, "ClampWorkspace(" + name + ")::input(double)::position")
 
       ,
@@ -44,15 +44,23 @@ ClampWorkspace::ClampWorkspace(const string &fName)
       timeUpdate(0)
 
       ,
-      alpha(6, 6), alphabar(6, 6)
+      alpha(6, 6),
+      alphabar(6, 6)
 
       ,
       pd(3)
 
       ,
-      beta(1), scale(0), dm_min(0.019), dm_max(0.025), dm_min_yaw(0.019),
-      dm_max_yaw(0.119), theta_min(-30. * 3.14159 / 180.),
-      theta_max(5. * 3.14159 / 180.), mode(1), frame(FRAME_POINT)
+      beta(1),
+      scale(0),
+      dm_min(0.019),
+      dm_max(0.025),
+      dm_min_yaw(0.019),
+      dm_max_yaw(0.119),
+      theta_min(-30. * 3.14159 / 180.),
+      theta_max(5. * 3.14159 / 180.),
+      mode(1),
+      frame(FRAME_POINT)
 
 {
   alpha.setZero();
@@ -94,18 +102,18 @@ void ClampWorkspace::update(int time) {
     }
 
     switch (mode) {
-    case 0:
-      alpha(i, i) = 0;
-      alphabar(i, i) = 1;
-      break;
-    case 1:
-      alpha(i, i) = 1;
-      alphabar(i, i) = 0;
-      break;
-    case 2:
-    default:
-      alpha(i, i) = 0.5 * (1 + tanh(1 / Y - 1 / (1 - Y)));
-      alphabar(i, i) = 1 - alpha(i);
+      case 0:
+        alpha(i, i) = 0;
+        alphabar(i, i) = 1;
+        break;
+      case 1:
+        alpha(i, i) = 1;
+        alphabar(i, i) = 0;
+        break;
+      case 2:
+      default:
+        alpha(i, i) = 0.5 * (1 + tanh(1 / Y - 1 / (1 - Y)));
+        alphabar(i, i) = 1 - alpha(i);
     }
 
     if (i == 2) {
diff --git a/src/tools/com-freezer.cpp b/src/tools/com-freezer.cpp
index 175ebc06..700e3440 100644
--- a/src/tools/com-freezer.cpp
+++ b/src/tools/com-freezer.cpp
@@ -8,6 +8,7 @@
  */
 
 #include <dynamic-graph/factory.h>
+
 #include <sot/core/com-freezer.hh>
 #include <sot/core/debug.hh>
 
@@ -17,7 +18,9 @@ using namespace dynamicgraph::sot;
 DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(CoMFreezer, "CoMFreezer");
 
 CoMFreezer::CoMFreezer(const std::string &name)
-    : Entity(name), m_lastCoM(3), m_previousPGInProcess(false),
+    : Entity(name),
+      m_lastCoM(3),
+      m_previousPGInProcess(false),
       m_lastStopTime(-1)
 
       ,
@@ -40,9 +43,8 @@ CoMFreezer::~CoMFreezer(void) {
   return;
 }
 
-dynamicgraph::Vector &
-CoMFreezer::computeFreezedCoM(dynamicgraph::Vector &freezedCoM,
-                              const int &time) {
+dynamicgraph::Vector &CoMFreezer::computeFreezedCoM(
+    dynamicgraph::Vector &freezedCoM, const int &time) {
   sotDEBUGIN(15);
 
   unsigned PGInProcess = PGInProcessSIN(time);
diff --git a/src/tools/device.cpp b/src/tools/device.cpp
index 262b7bf0..d07de744 100644
--- a/src/tools/device.cpp
+++ b/src/tools/device.cpp
@@ -14,19 +14,20 @@
 #define ENABLE_RT_LOG
 
 #include "sot/core/device.hh"
+
 #include <iostream>
 #include <sot/core/debug.hh>
 #include <sot/core/macros.hh>
 using namespace std;
 
-#include <Eigen/Geometry>
 #include <dynamic-graph/all-commands.h>
 #include <dynamic-graph/factory.h>
 #include <dynamic-graph/linear-algebra.h>
 #include <dynamic-graph/real-time-logger.h>
-#include <sot/core/matrix-geometry.hh>
 
+#include <Eigen/Geometry>
 #include <pinocchio/multibody/liegroup/special-euclidean.hpp>
+#include <sot/core/matrix-geometry.hh>
 using namespace dynamicgraph::sot;
 using namespace dynamicgraph;
 
@@ -70,7 +71,9 @@ Device::~Device() {
 }
 
 Device::Device(const std::string &n)
-    : Entity(n), state_(6), sanityCheck_(true),
+    : Entity(n),
+      state_(6),
+      sanityCheck_(true),
       controlInputType_(CONTROL_INPUT_ONE_INTEGRATION),
       controlSIN(NULL, "Device(" + n + ")::input(double)::control"),
       attitudeSIN(NULL, "Device(" + n + ")::input(vector3)::attitudeIN"),
@@ -89,7 +92,8 @@ Device::Device(const std::string &n)
       pseudoTorqueSOUT("Device(" + n + ")::output(vector)::ptorque")
 
       ,
-      ffPose_(), forceZero6(6) {
+      ffPose_(),
+      forceZero6(6) {
   forceZero6.fill(0);
   /* --- SIGNALS --- */
   for (int i = 0; i < 4; ++i) {
@@ -121,20 +125,23 @@ Device::Device(const std::string &n)
   {
     std::string docstring;
     /* Command setStateSize. */
-    docstring = "\n"
-                "    Set size of state vector\n"
-                "\n";
+    docstring =
+        "\n"
+        "    Set size of state vector\n"
+        "\n";
     addCommand("resize", new command::Setter<Device, unsigned int>(
                              *this, &Device::setStateSize, docstring));
-    docstring = "\n"
-                "    Set state vector value\n"
-                "\n";
+    docstring =
+        "\n"
+        "    Set state vector value\n"
+        "\n";
     addCommand("set", new command::Setter<Device, Vector>(
                           *this, &Device::setState, docstring));
 
-    docstring = "\n"
-                "    Set velocity vector value\n"
-                "\n";
+    docstring =
+        "\n"
+        "    Set velocity vector value\n"
+        "\n";
     addCommand("setVelocity", new command::Setter<Device, Vector>(
                                   *this, &Device::setVelocity, docstring));
 
@@ -145,35 +152,39 @@ Device::Device(const std::string &n)
                command::makeCommandVoid1(*this, setRootPtr, docstring));
 
     /* Second Order Integration set. */
-    docstring = "\n"
-                "    Set the position calculous starting from  \n"
-                "    acceleration measure instead of velocity \n"
-                "\n";
+    docstring =
+        "\n"
+        "    Set the position calculous starting from  \n"
+        "    acceleration measure instead of velocity \n"
+        "\n";
 
     addCommand("setSecondOrderIntegration",
                command::makeCommandVoid0(
                    *this, &Device::setSecondOrderIntegration, docstring));
 
     /* Display information */
-    docstring = "\n"
-                "    Display information on device  \n"
-                "\n";
+    docstring =
+        "\n"
+        "    Display information on device  \n"
+        "\n";
     addCommand("display", command::makeCommandVoid0(*this, &Device::cmdDisplay,
                                                     docstring));
 
     /* SET of control input type. */
-    docstring = "\n"
-                "    Set the type of control input which can be  \n"
-                "    acceleration, velocity, or position\n"
-                "\n";
+    docstring =
+        "\n"
+        "    Set the type of control input which can be  \n"
+        "    acceleration, velocity, or position\n"
+        "\n";
 
     addCommand("setControlInputType",
                new command::Setter<Device, string>(
                    *this, &Device::setControlInputType, docstring));
 
-    docstring = "\n"
-                "    Enable/Disable sanity checks\n"
-                "\n";
+    docstring =
+        "\n"
+        "    Enable/Disable sanity checks\n"
+        "\n";
     addCommand("setSanityCheck",
                new command::Setter<Device, bool>(*this, &Device::setSanityCheck,
                                                  docstring));
@@ -233,36 +244,38 @@ void Device::setState(const Vector &st) {
     SOT_CORE_DISABLE_WARNING_PUSH
     SOT_CORE_DISABLE_WARNING_FALLTHROUGH
     switch (controlInputType_) {
-    case CONTROL_INPUT_TWO_INTEGRATION:
-      dgRTLOG()
-          << "Sanity check for this control is not well supported. "
-             "In order to make it work, use pinocchio and the contact forces "
-             "to estimate the joint torques for the given acceleration.\n";
-      if (s != lowerTorque_.size() || s != upperTorque_.size()) {
-        std::ostringstream os;
-        os << "dynamicgraph::sot::Device::setState: upper and/or lower torque"
-              "bounds do not match state size. Input State size = "
-           << st.size() << ", lowerTorque_.size() = " << lowerTorque_.size()
-           << ", upperTorque_.size() = " << upperTorque_.size()
-           << ". Set them first with setTorqueBounds.";
-        throw std::invalid_argument(os.str().c_str());
+      case CONTROL_INPUT_TWO_INTEGRATION:
+        dgRTLOG()
+            << "Sanity check for this control is not well supported. "
+               "In order to make it work, use pinocchio and the contact forces "
+               "to estimate the joint torques for the given acceleration.\n";
+        if (s != lowerTorque_.size() || s != upperTorque_.size()) {
+          std::ostringstream os;
+          os << "dynamicgraph::sot::Device::setState: upper and/or lower torque"
+                "bounds do not match state size. Input State size = "
+             << st.size() << ", lowerTorque_.size() = " << lowerTorque_.size()
+             << ", upperTorque_.size() = " << upperTorque_.size()
+             << ". Set them first with setTorqueBounds.";
+          throw std::invalid_argument(os.str().c_str());
+          // fall through
+        }
+      case CONTROL_INPUT_ONE_INTEGRATION:
+        if (s != lowerVelocity_.size() || s != upperVelocity_.size()) {
+          std::ostringstream os;
+          os << "dynamicgraph::sot::Device::setState: upper and/or lower "
+                "velocity"
+                " bounds do not match state size. Input State size = "
+             << st.size()
+             << ", lowerVelocity_.size() = " << lowerVelocity_.size()
+             << ", upperVelocity_.size() = " << upperVelocity_.size()
+             << ". Set them first with setVelocityBounds.";
+          throw std::invalid_argument(os.str().c_str());
+        }
         // fall through
-      }
-    case CONTROL_INPUT_ONE_INTEGRATION:
-      if (s != lowerVelocity_.size() || s != upperVelocity_.size()) {
-        std::ostringstream os;
-        os << "dynamicgraph::sot::Device::setState: upper and/or lower velocity"
-              " bounds do not match state size. Input State size = "
-           << st.size() << ", lowerVelocity_.size() = " << lowerVelocity_.size()
-           << ", upperVelocity_.size() = " << upperVelocity_.size()
-           << ". Set them first with setVelocityBounds.";
-        throw std::invalid_argument(os.str().c_str());
-      }
-      // fall through
-    case CONTROL_INPUT_NO_INTEGRATION:
-      break;
-    default:
-      throw std::invalid_argument("Invalid control mode type.");
+      case CONTROL_INPUT_NO_INTEGRATION:
+        break;
+      default:
+        throw std::invalid_argument("Invalid control mode type.");
     }
     SOT_CORE_DISABLE_WARNING_POP
   }
@@ -285,9 +298,8 @@ void Device::setRoot(const Matrix &root) {
 void Device::setRoot(const MatrixHomogeneous &worldMwaist) {
   VectorRollPitchYaw r = (worldMwaist.linear().eulerAngles(2, 1, 0)).reverse();
   Vector q = state_;
-  q = worldMwaist.translation(); // abusive ... but working.
-  for (unsigned int i = 0; i < 3; ++i)
-    q(i + 3) = r(i);
+  q = worldMwaist.translation();  // abusive ... but working.
+  for (unsigned int i = 0; i < 3; ++i) q(i + 3) = r(i);
 }
 
 void Device::setSecondOrderIntegration() {
@@ -320,30 +332,30 @@ void Device::setSanityCheck(const bool &enableCheck) {
     SOT_CORE_DISABLE_WARNING_PUSH
     SOT_CORE_DISABLE_WARNING_FALLTHROUGH
     switch (controlInputType_) {
-    case CONTROL_INPUT_TWO_INTEGRATION:
-      dgRTLOG()
-          << "Sanity check for this control is not well supported. "
-             "In order to make it work, use pinocchio and the contact forces "
-             "to estimate the joint torques for the given acceleration.\n";
-      if (s != lowerTorque_.size() || s != upperTorque_.size())
-        throw std::invalid_argument(
-            "Upper and/or lower torque bounds "
-            "do not match state size. Set them first with setTorqueBounds");
-      // fall through
-    case CONTROL_INPUT_ONE_INTEGRATION:
-      if (s != lowerVelocity_.size() || s != upperVelocity_.size())
-        throw std::invalid_argument(
-            "Upper and/or lower velocity bounds "
-            "do not match state size. Set them first with setVelocityBounds");
-      // fall through
-    case CONTROL_INPUT_NO_INTEGRATION:
-      if (s != lowerPosition_.size() || s != upperPosition_.size())
-        throw std::invalid_argument(
-            "Upper and/or lower position bounds "
-            "do not match state size. Set them first with setPositionBounds");
-      break;
-    default:
-      throw std::invalid_argument("Invalid control mode type.");
+      case CONTROL_INPUT_TWO_INTEGRATION:
+        dgRTLOG()
+            << "Sanity check for this control is not well supported. "
+               "In order to make it work, use pinocchio and the contact forces "
+               "to estimate the joint torques for the given acceleration.\n";
+        if (s != lowerTorque_.size() || s != upperTorque_.size())
+          throw std::invalid_argument(
+              "Upper and/or lower torque bounds "
+              "do not match state size. Set them first with setTorqueBounds");
+        // fall through
+      case CONTROL_INPUT_ONE_INTEGRATION:
+        if (s != lowerVelocity_.size() || s != upperVelocity_.size())
+          throw std::invalid_argument(
+              "Upper and/or lower velocity bounds "
+              "do not match state size. Set them first with setVelocityBounds");
+        // fall through
+      case CONTROL_INPUT_NO_INTEGRATION:
+        if (s != lowerPosition_.size() || s != upperPosition_.size())
+          throw std::invalid_argument(
+              "Upper and/or lower position bounds "
+              "do not match state size. Set them first with setPositionBounds");
+        break;
+      default:
+        throw std::invalid_argument("Invalid control mode type.");
     }
     SOT_CORE_DISABLE_WARNING_POP
   }
@@ -438,8 +450,7 @@ void Device::increment(const double &dt) {
     velocitySOUT.setTime(time + 1);
   }
   for (int i = 0; i < 4; ++i) {
-    if (!withForceSignals[i])
-      forcesSOUT[i]->setConstant(forceZero6);
+    if (!withForceSignals[i]) forcesSOUT[i]->setConstant(forceZero6);
   }
   Vector zmp(3);
   zmp.fill(.0);
@@ -479,15 +490,15 @@ inline bool saturateBounds(double &val, const double &lower,
   return false;
 }
 
-#define CHECK_BOUNDS(val, lower, upper, what)                                  \
-  for (int i = 0; i < val.size(); ++i) {                                       \
-    double old = val(i);                                                       \
-    if (saturateBounds(val(i), lower(i), upper(i))) {                          \
-      std::ostringstream oss;                                                  \
-      oss << "Robot " what " bound violation at DoF " << i << ": requested "   \
-          << old << " but set " << val(i) << '\n';                             \
-      SEND_ERROR_STREAM_MSG(oss.str());                                        \
-    }                                                                          \
+#define CHECK_BOUNDS(val, lower, upper, what)                                \
+  for (int i = 0; i < val.size(); ++i) {                                     \
+    double old = val(i);                                                     \
+    if (saturateBounds(val(i), lower(i), upper(i))) {                        \
+      std::ostringstream oss;                                                \
+      oss << "Robot " what " bound violation at DoF " << i << ": requested " \
+          << old << " but set " << val(i) << '\n';                           \
+      SEND_ERROR_STREAM_MSG(oss.str());                                      \
+    }                                                                        \
   }
 
 void Device::integrate(const double &dt) {
@@ -504,8 +515,7 @@ void Device::integrate(const double &dt) {
     return;
   }
 
-  if (vel_control_.size() == 0)
-    vel_control_ = Vector::Zero(controlIN.size());
+  if (vel_control_.size() == 0) vel_control_ = Vector::Zero(controlIN.size());
 
   // If control size is state size - 6, integrate joint angles,
   // if control and state are of same size, integrate 6 first degrees of
diff --git a/src/tools/event.cpp b/src/tools/event.cpp
index 9fa7295d..ae388ca2 100644
--- a/src/tools/event.cpp
+++ b/src/tools/event.cpp
@@ -1,10 +1,10 @@
 // Copyright (c) 2017, Joseph Mirabel
 // Authors: Joseph Mirabel (joseph.mirabel@laas.fr)
 
-#include <sot/core/event.hh>
-
 #include <dynamic-graph/factory.h>
 
+#include <sot/core/event.hh>
+
 namespace dynamicgraph {
 namespace sot {
 
@@ -24,8 +24,8 @@ bool &Event::check(bool &ret, const int &time) {
     lastVal_ = val;
   }
   if (trigger) {
-    for (Triggers_t::const_iterator _s = triggers.begin();
-         _s != triggers.end(); ++_s)
+    for (Triggers_t::const_iterator _s = triggers.begin(); _s != triggers.end();
+         ++_s)
       (*_s)->recompute(time);
     timeSinceUp_ = 0;
   }
@@ -33,5 +33,5 @@ bool &Event::check(bool &ret, const int &time) {
 }
 
 DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(Event, "Event");
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
diff --git a/src/tools/exp-moving-avg.cpp b/src/tools/exp-moving-avg.cpp
index 47863c81..1efca5ce 100644
--- a/src/tools/exp-moving-avg.cpp
+++ b/src/tools/exp-moving-avg.cpp
@@ -6,11 +6,10 @@
  *
  */
 
-#include <boost/function.hpp>
-
 #include <dynamic-graph/all-commands.h>
 #include <dynamic-graph/factory.h>
 
+#include <boost/function.hpp>
 #include <sot/core/exp-moving-avg.hh>
 #include <sot/core/factory.hh>
 
@@ -36,16 +35,18 @@ ExpMovingAvg::ExpMovingAvg(const std::string &n)
       averageSOUT(boost::bind(&ExpMovingAvg::update, this, _1, _2),
                   updateSIN << refresherSINTERN,
                   "ExpMovingAvg(" + n + ")::output(vector)::average"),
-      alpha(0.), init(false) {
+      alpha(0.),
+      init(false) {
   // Register signals into the entity.
   signalRegistration(updateSIN << averageSOUT);
   refresherSINTERN.setDependencyType(TimeDependency<int>::ALWAYS_READY);
 
   std::string docstring;
   // setAlpha
-  docstring = "\n"
-              "    Set the alpha used to update the current value."
-              "\n";
+  docstring =
+      "\n"
+      "    Set the alpha used to update the current value."
+      "\n";
   addCommand(std::string("setAlpha"),
              new ::dynamicgraph::command::Setter<ExpMovingAvg, double>(
                  *this, &ExpMovingAvg::setAlpha, docstring));
diff --git a/src/tools/gradient-ascent.cpp b/src/tools/gradient-ascent.cpp
index b8d1f872..b12b4c24 100644
--- a/src/tools/gradient-ascent.cpp
+++ b/src/tools/gradient-ascent.cpp
@@ -6,11 +6,10 @@
  *
  */
 
-#include <boost/function.hpp>
-
 #include <dynamic-graph/all-commands.h>
 #include <dynamic-graph/factory.h>
 
+#include <boost/function.hpp>
 #include <sot/core/factory.hh>
 #include <sot/core/gradient-ascent.hh>
 
diff --git a/src/tools/gripper-control.cpp b/src/tools/gripper-control.cpp
index ef947b93..29fb5fb9 100644
--- a/src/tools/gripper-control.cpp
+++ b/src/tools/gripper-control.cpp
@@ -9,14 +9,14 @@
 
 #define ENABLE_RT_LOG
 
+#include <dynamic-graph/all-commands.h>
+#include <dynamic-graph/real-time-logger.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/factory.hh>
 #include <sot/core/gripper-control.hh>
 #include <sot/core/macros-signal.hh>
 
-#include <dynamic-graph/all-commands.h>
-#include <dynamic-graph/real-time-logger.h>
-
 using namespace dynamicgraph::sot;
 using namespace dynamicgraph;
 
@@ -26,15 +26,15 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(GripperControlPlugin, "GripperControl");
 /* --- PLUGIN --------------------------------------------------------------- */
 /* --- PLUGIN --------------------------------------------------------------- */
 
-#define SOT_FULL_TO_REDUCED(sotName)                                           \
-  sotName##FullSizeSIN(NULL, "GripperControl(" + name +                        \
-                                 ")::input(vector)::" + #sotName + "FullIN"),  \
-      sotName##ReduceSOUT(SOT_INIT_SIGNAL_2(GripperControlPlugin::selector,    \
-                                            sotName##FullSizeSIN,              \
-                                            dynamicgraph::Vector,              \
-                                            selectionSIN, Flags),              \
-                          "GripperControl(" + name +                           \
-                              ")::input(vector)::" + #sotName + "ReducedOUT")
+#define SOT_FULL_TO_REDUCED(sotName)                                          \
+  sotName##FullSizeSIN(NULL, "GripperControl(" + name +                       \
+                                 ")::input(vector)::" + #sotName + "FullIN"), \
+      sotName##ReduceSOUT(                                                    \
+          SOT_INIT_SIGNAL_2(GripperControlPlugin::selector,                   \
+                            sotName##FullSizeSIN, dynamicgraph::Vector,       \
+                            selectionSIN, Flags),                             \
+          "GripperControl(" + name + ")::input(vector)::" + #sotName +        \
+              "ReducedOUT")
 
 const double GripperControl::OFFSET_DEFAULT = 0.9;
 
@@ -45,18 +45,20 @@ GripperControl::GripperControl(void)
     : offset(GripperControl::OFFSET_DEFAULT), factor() {}
 
 GripperControlPlugin::GripperControlPlugin(const std::string &name)
-    : Entity(name), calibrationStarted(false),
+    : Entity(name),
+      calibrationStarted(false),
       positionSIN(NULL,
                   "GripperControl(" + name + ")::input(vector)::position"),
-      positionDesSIN(NULL, "GripperControl(" + name +
-                               ")::input(vector)::positionDes"),
+      positionDesSIN(
+          NULL, "GripperControl(" + name + ")::input(vector)::positionDes"),
       torqueSIN(NULL, "GripperControl(" + name + ")::input(vector)::torque"),
-      torqueLimitSIN(NULL, "GripperControl(" + name +
-                               ")::input(vector)::torqueLimit"),
+      torqueLimitSIN(
+          NULL, "GripperControl(" + name + ")::input(vector)::torqueLimit"),
       selectionSIN(NULL, "GripperControl(" + name + ")::input(vector)::selec")
 
       ,
-      SOT_FULL_TO_REDUCED(position), SOT_FULL_TO_REDUCED(torque),
+      SOT_FULL_TO_REDUCED(position),
+      SOT_FULL_TO_REDUCED(torque),
       SOT_FULL_TO_REDUCED(torqueLimit),
       desiredPositionSOUT(
           SOT_MEMBER_SIGNAL_4(GripperControl::computeDesiredPosition,
@@ -127,12 +129,11 @@ void GripperControl::computeIncrement(
   }
 }
 
-dynamicgraph::Vector &
-GripperControl::computeDesiredPosition(const dynamicgraph::Vector &currentPos,
-                                       const dynamicgraph::Vector &desiredPos,
-                                       const dynamicgraph::Vector &torques,
-                                       const dynamicgraph::Vector &torqueLimits,
-                                       dynamicgraph::Vector &referencePos) {
+dynamicgraph::Vector &GripperControl::computeDesiredPosition(
+    const dynamicgraph::Vector &currentPos,
+    const dynamicgraph::Vector &desiredPos, const dynamicgraph::Vector &torques,
+    const dynamicgraph::Vector &torqueLimits,
+    dynamicgraph::Vector &referencePos) {
   const dynamicgraph::Vector::Index SIZE = currentPos.size();
   //  if( (SIZE==torques.size()) )
   //    { /* ERROR ... */ }
@@ -156,20 +157,18 @@ GripperControl::computeDesiredPosition(const dynamicgraph::Vector &currentPos,
   return referencePos;
 }
 
-dynamicgraph::Vector &
-GripperControl::selector(const dynamicgraph::Vector &fullsize,
-                         const Flags &selec, dynamicgraph::Vector &desPos) {
+dynamicgraph::Vector &GripperControl::selector(
+    const dynamicgraph::Vector &fullsize, const Flags &selec,
+    dynamicgraph::Vector &desPos) {
   int size = 0;
   for (int i = 0; i < fullsize.size(); ++i) {
-    if (selec(i))
-      size++;
+    if (selec(i)) size++;
   }
 
   int curs = 0;
   desPos.resize(size);
   for (int i = 0; i < fullsize.size(); ++i) {
-    if (selec(i))
-      desPos(curs++) = fullsize(i);
+    if (selec(i)) desPos(curs++) = fullsize(i);
   }
 
   return desPos;
diff --git a/src/tools/joint-limitator.cpp b/src/tools/joint-limitator.cpp
index b4eec1b8..3a0474b0 100644
--- a/src/tools/joint-limitator.cpp
+++ b/src/tools/joint-limitator.cpp
@@ -72,7 +72,7 @@ dynamicgraph::Vector &JointLimitator::computeControl(dynamicgraph::Vector &uOUT,
 
   for (unsigned int i = 0; i < controlSize; ++i) {
     double qnext = q(i + offset) + uIN(i) * 0.005;
-    if ((i + offset < 6) || // do not take into account of freeflyer
+    if ((i + offset < 6) ||  // do not take into account of freeflyer
         ((qnext < UJL(i + offset)) && (qnext > LJL(i + offset)))) {
       uOUT(i) = uIN(i);
     }
@@ -85,6 +85,5 @@ dynamicgraph::Vector &JointLimitator::computeControl(dynamicgraph::Vector &uOUT,
 }
 
 void JointLimitator::display(std::ostream &os) const {
-
   os << "JointLimitator <" << name << "> ... TODO";
 }
diff --git a/src/tools/joint-trajectory-command.hh b/src/tools/joint-trajectory-command.hh
index c645e59d..b202cc49 100644
--- a/src/tools/joint-trajectory-command.hh
+++ b/src/tools/joint-trajectory-command.hh
@@ -8,12 +8,11 @@
 #ifndef JOINT_TRAJECTORY_COMMAND_H_
 #define JOINT_TRAJECTORY_COMMAND_H_
 
-#include <boost/assign/list_of.hpp>
-
 #include <dynamic-graph/command-getter.h>
 #include <dynamic-graph/command-setter.h>
 #include <dynamic-graph/command.h>
 
+#include <boost/assign/list_of.hpp>
 #include <sot/core/joint-trajectory-entity.hh>
 
 namespace dynamicgraph {
@@ -24,7 +23,7 @@ using ::dynamicgraph::command::Command;
 using ::dynamicgraph::command::Value;
 
 class SetInitTrajectory : public Command {
-public:
+ public:
   virtual ~SetInitTrajectory() {}
 
   /// Set the initial trajectory.
@@ -33,13 +32,12 @@ public:
       : Command(entity, boost::assign::list_of(Value::STRING), docstring) {}
 
   virtual Value doExecute() {
-
     // return void
     return Value();
   }
 };
-} // namespace classSot
-} // namespace command
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace classSot
+}  // namespace command
+}  // namespace sot
+}  // namespace dynamicgraph
 #endif /* JOINT_TRAJECTORY_COMMAND_H_ */
diff --git a/src/tools/joint-trajectory-entity.cpp b/src/tools/joint-trajectory-entity.cpp
index 2bcd6b7f..18317b51 100644
--- a/src/tools/joint-trajectory-entity.cpp
+++ b/src/tools/joint-trajectory-entity.cpp
@@ -11,11 +11,11 @@
 #include <sot/core/matrix-geometry.hh>
 #ifdef VP_DEBUG
 class sotJTE__INIT {
-public:
+ public:
   sotJTE__INIT(void) { dynamicgraph::sot::DebugTrace::openFile(); }
 };
 sotJTE__INIT sotJTE_initiator;
-#endif //#ifdef VP_DEBUG
+#endif  //#ifdef VP_DEBUG
 
 #include <dynamic-graph/all-commands.h>
 #include <dynamic-graph/command-bind.h>
@@ -34,8 +34,9 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(SotJointTrajectoryEntity,
                                    "SotJointTrajectoryEntity");
 
 SotJointTrajectoryEntity::SotJointTrajectoryEntity(const std::string &n)
-    : Entity(n), refresherSINTERN("SotJointTrajectoryEntity(" + n +
-                                  ")::intern(dummy)::refresher"),
+    : Entity(n),
+      refresherSINTERN("SotJointTrajectoryEntity(" + n +
+                       ")::intern(dummy)::refresher"),
       OneStepOfUpdateS(
           boost::bind(&SotJointTrajectoryEntity::OneStepOfUpdate, this, _1, _2),
           refresherSINTERN << trajectorySIN,
@@ -59,7 +60,10 @@ SotJointTrajectoryEntity::SotJointTrajectoryEntity(const std::string &n)
                 "SotJointTrajectory(" + n + ")::output(uint)::seqid"),
       trajectorySIN(NULL, "SotJointTrajectory(" + n +
                               ")::input(trajectory)::trajectoryIN"),
-      index_(0), traj_timestamp_(0, 0), seqid_(0), deque_traj_(0) {
+      index_(0),
+      traj_timestamp_(0, 0),
+      seqid_(0),
+      deque_traj_(0) {
   using namespace command;
   sotDEBUGIN(5);
 
@@ -69,12 +73,13 @@ SotJointTrajectoryEntity::SotJointTrajectoryEntity(const std::string &n)
   refresherSINTERN.setReady(true);
 
   std::string docstring;
-  docstring = "    \n"
-              "    initialize the first trajectory.\n"
-              "    \n"
-              "      Input:\n"
-              "        = a string : .\n"
-              "    \n";
+  docstring =
+      "    \n"
+      "    initialize the first trajectory.\n"
+      "    \n"
+      "      Input:\n"
+      "        = a string : .\n"
+      "    \n";
   addCommand("initTraj",
              makeCommandVoid1(*this, &SotJointTrajectoryEntity::setInitTraj,
                               docCommandVoid1("Set initial trajectory",
@@ -83,12 +88,10 @@ SotJointTrajectoryEntity::SotJointTrajectoryEntity(const std::string &n)
 }
 
 void SotJointTrajectoryEntity::UpdatePoint(const JointTrajectoryPoint &aJTP) {
-
   sotDEBUGIN(5);
   // Posture
   std::vector<JointTrajectoryPoint>::size_type possize = aJTP.positions_.size();
-  if (possize == 0)
-    return;
+  if (possize == 0) return;
 
   pose_.resize(aJTP.positions_.size());
   for (std::vector<JointTrajectoryPoint>::size_type i = 0; i < possize - 5;
@@ -169,7 +172,6 @@ void SotJointTrajectoryEntity::UpdateTrajectory(const Trajectory &aTrajectory) {
 
   // Strategy at the end of the trajectory.
   if (index_ >= deque_traj_.front().points_.size()) {
-
     if (deque_traj_.size() > 1) {
       deque_traj_.pop_front();
       index_ = 0;
@@ -237,9 +239,8 @@ sot::MatrixHomogeneous SotJointTrajectoryEntity::XYZThetaToMatrixHomogeneous(
   return res;
 }
 
-dynamicgraph::Vector &
-SotJointTrajectoryEntity::getNextPosition(dynamicgraph::Vector &pos,
-                                          const int &time) {
+dynamicgraph::Vector &SotJointTrajectoryEntity::getNextPosition(
+    dynamicgraph::Vector &pos, const int &time) {
   sotDEBUGIN(5);
   OneStepOfUpdateS(time);
   pos = pose_;
@@ -248,9 +249,8 @@ SotJointTrajectoryEntity::getNextPosition(dynamicgraph::Vector &pos,
   return pos;
 }
 
-dynamicgraph::Vector &
-SotJointTrajectoryEntity::getNextCoM(dynamicgraph::Vector &com,
-                                     const int &time) {
+dynamicgraph::Vector &SotJointTrajectoryEntity::getNextCoM(
+    dynamicgraph::Vector &com, const int &time) {
   sotDEBUGIN(5);
   OneStepOfUpdateS(time);
   com = com_;
@@ -258,9 +258,8 @@ SotJointTrajectoryEntity::getNextCoM(dynamicgraph::Vector &com,
   return com;
 }
 
-dynamicgraph::Vector &
-SotJointTrajectoryEntity::getNextCoP(dynamicgraph::Vector &cop,
-                                     const int &time) {
+dynamicgraph::Vector &SotJointTrajectoryEntity::getNextCoP(
+    dynamicgraph::Vector &cop, const int &time) {
   sotDEBUGIN(5);
   OneStepOfUpdateS(time);
   cop = cop_;
@@ -268,9 +267,8 @@ SotJointTrajectoryEntity::getNextCoP(dynamicgraph::Vector &cop,
   return cop;
 }
 
-sot::MatrixHomogeneous &
-SotJointTrajectoryEntity::getNextWaist(sot::MatrixHomogeneous &waist,
-                                       const int &time) {
+sot::MatrixHomogeneous &SotJointTrajectoryEntity::getNextWaist(
+    sot::MatrixHomogeneous &waist, const int &time) {
   sotDEBUGIN(5);
   OneStepOfUpdateS(time);
   waist = waist_;
diff --git a/src/tools/kalman.cpp b/src/tools/kalman.cpp
index adc5b936..84defc44 100644
--- a/src/tools/kalman.cpp
+++ b/src/tools/kalman.cpp
@@ -10,14 +10,14 @@
  */
 
 /* --- SOT --- */
+#include <dynamic-graph/command-setter.h>
 #include <dynamic-graph/factory.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/exception-tools.hh>
 #include <sot/core/factory.hh>
 #include <sot/core/kalman.hh> /* Header of the class implemented here.   */
 
-#include <dynamic-graph/command-setter.h>
-
 namespace dynamicgraph {
 using command::Setter;
 namespace sot {
@@ -25,7 +25,8 @@ namespace sot {
 DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(Kalman, "Kalman");
 
 Kalman::Kalman(const std::string &name)
-    : Entity(name), measureSIN(NULL, "Kalman(" + name + ")::input(vector)::y"),
+    : Entity(name),
+      measureSIN(NULL, "Kalman(" + name + ")::input(vector)::y"),
       modelTransitionSIN(NULL, "Kalman(" + name + ")::input(matrix)::F"),
       modelMeasureSIN(NULL, "Kalman(" + name + ")::input(matrix)::H"),
       noiseTransitionSIN(NULL, "Kalman(" + name + ")::input(matrix)::Q"),
@@ -36,7 +37,8 @@ Kalman::Kalman(const std::string &name)
       observationPredictedSIN(0, "Kalman(" + name + ")::input(vector)::y_pred"),
       varianceUpdateSOUT("Kalman(" + name + ")::output(vector)::P"),
       stateUpdateSOUT("Kalman(" + name + ")::output(vector)::x_est"),
-      stateEstimation_(), stateVariance_() {
+      stateEstimation_(),
+      stateVariance_() {
   sotDEBUGIN(15);
   varianceUpdateSOUT.setFunction(
       boost::bind(&Kalman::computeVarianceUpdate, this, _1, _2));
@@ -48,18 +50,20 @@ Kalman::Kalman(const std::string &name)
                                 << noiseMeasureSIN << statePredictedSIN
                                 << stateUpdateSOUT << varianceUpdateSOUT);
 
-  std::string docstring = "  Set initial state estimation\n"
-                          "\n"
-                          "  input:\n"
-                          "    - a vector: initial state\n";
+  std::string docstring =
+      "  Set initial state estimation\n"
+      "\n"
+      "  input:\n"
+      "    - a vector: initial state\n";
   addCommand("setInitialState",
              new Setter<Kalman, Vector>(*this, &Kalman::setStateEstimation,
                                         docstring));
 
-  docstring = "  Set variance of initial state estimation\n"
-              "\n"
-              "  input:\n"
-              "    - a matrix: variance covariance matrix\n";
+  docstring =
+      "  Set variance of initial state estimation\n"
+      "\n"
+      "  input:\n"
+      "    - a matrix: variance covariance matrix\n";
   addCommand(
       "setInitialVariance",
       new Setter<Kalman, Matrix>(*this, &Kalman::setStateVariance, docstring));
@@ -75,7 +79,6 @@ Matrix &Kalman::computeVarianceUpdate(Matrix &Pk_k, const int &time) {
     varianceUpdateSOUT.addDependency(noiseTransitionSIN);
     varianceUpdateSOUT.addDependency(modelTransitionSIN);
   } else {
-
     const Matrix &Q = noiseTransitionSIN(time);
     const Matrix &R = noiseMeasureSIN(time);
     const Matrix &F = modelTransitionSIN(time);
@@ -175,8 +178,8 @@ Vector &Kalman::computeStateUpdate(Vector &x_est, const int &time) {
 
 void Kalman::display(std::ostream &) const {}
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
 
 /*!
   \file Kalman.cpp
diff --git a/src/tools/latch.cpp b/src/tools/latch.cpp
index 1cc6369d..1c425a52 100644
--- a/src/tools/latch.cpp
+++ b/src/tools/latch.cpp
@@ -11,5 +11,5 @@
 namespace dynamicgraph {
 namespace sot {
 DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(Latch, "Latch");
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
diff --git a/src/tools/mailbox-vector.cpp b/src/tools/mailbox-vector.cpp
index f82850e2..7a13fffc 100644
--- a/src/tools/mailbox-vector.cpp
+++ b/src/tools/mailbox-vector.cpp
@@ -9,6 +9,7 @@
 
 /* --- SOT PLUGIN  --- */
 #include <dynamic-graph/linear-algebra.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/factory.hh>
 #include <sot/core/mailbox-vector.hh>
diff --git a/src/tools/motion-period.cpp b/src/tools/motion-period.cpp
index 71cf9fad..7c7bc05a 100644
--- a/src/tools/motion-period.cpp
+++ b/src/tools/motion-period.cpp
@@ -12,12 +12,12 @@
 /* --------------------------------------------------------------------- */
 
 /* --- SOT --- */
+#include <dynamic-graph/linear-algebra.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/exception-feature.hh>
 #include <sot/core/factory.hh>
 #include <sot/core/motion-period.hh>
-
-#include <dynamic-graph/linear-algebra.h>
 using namespace std;
 using namespace dynamicgraph::sot;
 using namespace dynamicgraph;
@@ -29,7 +29,8 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(MotionPeriod, "MotionPeriod");
 /* --------------------------------------------------------------------- */
 
 MotionPeriod::MotionPeriod(const string &fName)
-    : Entity(fName), motionParams(0),
+    : Entity(fName),
+      motionParams(0),
       motionSOUT(boost::bind(&MotionPeriod::computeMotion, this, _1, _2),
                  sotNOSIGNAL,
                  "MotionPeriod(" + name + ")::output(vector)::motion") {
@@ -52,19 +53,19 @@ dynamicgraph::Vector &MotionPeriod::computeMotion(dynamicgraph::Vector &res,
     double x = ((((time - p.initPeriod) % p.period) + 0.0) / (p.period + 0.0));
     res(i) = p.initAmplitude;
     switch (p.motionType) {
-    case MOTION_CONSTANT: {
-      res(i) += p.amplitude;
-      break;
-    }
-    case MOTION_SIN: {
-      res(i) += p.amplitude * sin(M_PI * 2 * x);
-      break;
-    }
-    case MOTION_COS: {
-      res(i) += p.amplitude * cos(M_PI * 2 * x);
-      break;
-    }
-      // case MOTION_: {res(i)+= p.amplitude; break}
+      case MOTION_CONSTANT: {
+        res(i) += p.amplitude;
+        break;
+      }
+      case MOTION_SIN: {
+        res(i) += p.amplitude * sin(M_PI * 2 * x);
+        break;
+      }
+      case MOTION_COS: {
+        res(i) += p.amplitude * cos(M_PI * 2 * x);
+        break;
+      }
+        // case MOTION_: {res(i)+= p.amplitude; break}
     }
   }
 
@@ -88,19 +89,19 @@ void MotionPeriod::display(std::ostream &os) const {
   os << "MotionPeriod <" << name << "> ... TODO";
 }
 
-#define SOT_PARAMS_CONFIG(ARGname, ARGtype)                                    \
-  else if (cmdLine == #ARGname) {                                              \
-    unsigned int rank;                                                         \
-    ARGtype period;                                                            \
-    cmdArgs >> rank >> std::ws;                                                \
-    if (rank >= this->size) {                                                  \
-      os << "!! Error: size size too large." << std::endl;                     \
-    }                                                                          \
-    if (cmdArgs.good()) {                                                      \
-      cmdArgs >> period;                                                       \
-      motionParams[rank].ARGname = period;                                     \
-    } else {                                                                   \
-      os << #ARGname << "[" << rank << "] = " << motionParams[rank].ARGname    \
-         << std::endl;                                                         \
-    }                                                                          \
+#define SOT_PARAMS_CONFIG(ARGname, ARGtype)                                 \
+  else if (cmdLine == #ARGname) {                                           \
+    unsigned int rank;                                                      \
+    ARGtype period;                                                         \
+    cmdArgs >> rank >> std::ws;                                             \
+    if (rank >= this->size) {                                               \
+      os << "!! Error: size size too large." << std::endl;                  \
+    }                                                                       \
+    if (cmdArgs.good()) {                                                   \
+      cmdArgs >> period;                                                    \
+      motionParams[rank].ARGname = period;                                  \
+    } else {                                                                \
+      os << #ARGname << "[" << rank << "] = " << motionParams[rank].ARGname \
+         << std::endl;                                                      \
+    }                                                                       \
   }
diff --git a/src/tools/neck-limitation.cpp b/src/tools/neck-limitation.cpp
index a7539a25..a0f43a3c 100644
--- a/src/tools/neck-limitation.cpp
+++ b/src/tools/neck-limitation.cpp
@@ -8,6 +8,7 @@
  */
 
 #include <dynamic-graph/pool.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/exception-tools.hh>
 #include <sot/core/factory.hh>
@@ -20,15 +21,18 @@ using namespace dynamicgraph;
 DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(NeckLimitation, "NeckLimitation");
 
 const double NeckLimitation::COEFF_LINEAR_DEFAULT = -25.0 / 42.0;
-const double NeckLimitation::COEFF_AFFINE_DEFAULT = 0.6981; // 40DG
+const double NeckLimitation::COEFF_AFFINE_DEFAULT = 0.6981;  // 40DG
 const double NeckLimitation::SIGN_TILT_DEFAULT = 1;
 const unsigned int NeckLimitation::PAN_RANK_DEFAULT = 14;
 const unsigned int NeckLimitation::TILT_RANK_DEFAULT = 15;
 
 NeckLimitation::NeckLimitation(const std::string &name)
-    : Entity(name), panRank(PAN_RANK_DEFAULT), tiltRank(TILT_RANK_DEFAULT),
+    : Entity(name),
+      panRank(PAN_RANK_DEFAULT),
+      tiltRank(TILT_RANK_DEFAULT),
       coeffLinearPan(COEFF_LINEAR_DEFAULT),
-      coeffAffinePan(COEFF_AFFINE_DEFAULT), signTilt(SIGN_TILT_DEFAULT)
+      coeffAffinePan(COEFF_AFFINE_DEFAULT),
+      signTilt(SIGN_TILT_DEFAULT)
 
       ,
       jointSIN(NULL, "NeckLimitation(" + name + ")::input(vector)::joint"),
@@ -54,9 +58,8 @@ NeckLimitation::~NeckLimitation(void) {
 /* --- SIGNALS -------------------------------------------------------------- */
 /* --- SIGNALS -------------------------------------------------------------- */
 
-dynamicgraph::Vector &
-NeckLimitation::computeJointLimitation(dynamicgraph::Vector &jointLimited,
-                                       const int &timeSpec) {
+dynamicgraph::Vector &NeckLimitation::computeJointLimitation(
+    dynamicgraph::Vector &jointLimited, const int &timeSpec) {
   sotDEBUGIN(15);
 
   const dynamicgraph::Vector &joint = jointSIN(timeSpec);
@@ -67,7 +70,7 @@ NeckLimitation::computeJointLimitation(dynamicgraph::Vector &jointLimited,
   double &panLimited = jointLimited(panRank);
   double &tiltLimited = jointLimited(tiltRank);
 
-  if (fabs(pan) < 1e-3) // pan == 0
+  if (fabs(pan) < 1e-3)  // pan == 0
   {
     sotDEBUG(15) << "Pan = 0" << std::endl;
     if (tilt * signTilt > coeffAffinePan) {
@@ -98,13 +101,12 @@ NeckLimitation::computeJointLimitation(dynamicgraph::Vector &jointLimited,
       tiltLimited = tilt;
       panLimited = pan;
     }
-  } else // pan<0
+  } else  // pan<0
   {
     sotDEBUG(15) << "Pan < 0" << std::endl;
     sotDEBUG(15) << tilt - coeffAffinePan << "<?" << (-1 * pan * coeffLinearPan)
                  << std::endl;
     if (tilt * signTilt > (-pan * coeffLinearPan + coeffAffinePan)) {
-
       // 	  sotDEBUG(15) << "Below" << std::endl;
       // 	  if( (tilt-coeffAffinePan)*coeffLinearPan<pan )
       // 	    {
diff --git a/src/tools/parameter-server.cpp b/src/tools/parameter-server.cpp
index 677473f1..face65a9 100644
--- a/src/tools/parameter-server.cpp
+++ b/src/tools/parameter-server.cpp
@@ -15,14 +15,13 @@
  */
 
 #include <iostream>
-
 #include <pinocchio/fwd.hpp>
 // keep pinocchio before boost
 
-#include <boost/property_tree/ptree.hpp>
-
 #include <dynamic-graph/all-commands.h>
 #include <dynamic-graph/factory.h>
+
+#include <boost/property_tree/ptree.hpp>
 #include <sot/core/debug.hh>
 #include <sot/core/exception-tools.hh>
 #include <sot/core/parameter-server.hh>
@@ -35,9 +34,9 @@ using namespace dynamicgraph::command;
 using namespace std;
 
 // Size to be aligned "-------------------------------------------------------"
-#define PROFILE_PWM_DESIRED_COMPUTATION                                        \
+#define PROFILE_PWM_DESIRED_COMPUTATION \
   "Control manager                                        "
-#define PROFILE_DYNAMIC_GRAPH_PERIOD                                           \
+#define PROFILE_DYNAMIC_GRAPH_PERIOD \
   "Control period                                         "
 
 #define INPUT_SIGNALS
@@ -54,10 +53,13 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(ParameterServer, "ParameterServer");
 /* --- CONSTRUCTION -------------------------------------------------- */
 /* ------------------------------------------------------------------- */
 ParameterServer::ParameterServer(const std::string &name)
-    : Entity(name), m_robot_util(RefVoidRobotUtil()), m_initSucceeded(false),
-      m_emergency_stop_triggered(false), m_is_first_iter(true), m_iter(0),
+    : Entity(name),
+      m_robot_util(RefVoidRobotUtil()),
+      m_initSucceeded(false),
+      m_emergency_stop_triggered(false),
+      m_is_first_iter(true),
+      m_iter(0),
       m_sleep_time(0.0) {
-
   //~ Entity::signalRegistration( INPUT_SIGNALS << OUTPUT_SIGNALS);
 
   /* Commands. */
@@ -74,10 +76,10 @@ ParameterServer::ParameterServer(const std::string &name)
                                        "Time period in seconds (double)")));
 
   addCommand("setNameToId",
-             makeCommandVoid2(*this, &ParameterServer::setNameToId,
-                              docCommandVoid2("Set map for a name to an Id",
-                                              "(string) joint name",
-                                              "(double) joint id")));
+             makeCommandVoid2(
+                 *this, &ParameterServer::setNameToId,
+                 docCommandVoid2("Set map for a name to an Id",
+                                 "(string) joint name", "(double) joint id")));
 
   addCommand(
       "setForceNameToForceId",
@@ -203,9 +205,7 @@ ParameterServer::ParameterServer(const std::string &name)
 }
 
 void ParameterServer::init_simple(const double &dt) {
-
-  if (dt <= 0.0)
-    return SEND_MSG("Timestep must be positive", MSG_TYPE_ERROR);
+  if (dt <= 0.0) return SEND_MSG("Timestep must be positive", MSG_TYPE_ERROR);
 
   m_dt = dt;
 
@@ -241,8 +241,7 @@ void ParameterServer::init_simple(const double &dt) {
 
 void ParameterServer::init(const double &dt, const std::string &urdfFile,
                            const std::string &robotRef) {
-  if (dt <= 0.0)
-    return SEND_MSG("Timestep must be positive", MSG_TYPE_ERROR);
+  if (dt <= 0.0) return SEND_MSG("Timestep must be positive", MSG_TYPE_ERROR);
   m_dt = dt;
   m_emergency_stop_triggered = false;
   m_initSucceeded = true;
@@ -299,8 +298,9 @@ void ParameterServer::setForceLimitsFromId(const double &jointId,
 void ParameterServer::setForceNameToForceId(const std::string &forceName,
                                             const double &forceId) {
   if (!m_initSucceeded) {
-    SEND_WARNING_STREAM_MSG("Cannot set force sensor name from force sensor id "
-                            " before initialization!");
+    SEND_WARNING_STREAM_MSG(
+        "Cannot set force sensor name from force sensor id "
+        " before initialization!");
     return;
   }
 
@@ -351,7 +351,8 @@ void ParameterServer::setFootFrameName(const std::string &FootName,
     SEND_WARNING_STREAM_MSG("Did not understand the foot name !" + FootName);
 }
 
-void ParameterServer::setHandFrameName(const std::string& HandName, const std::string& FrameName) {
+void ParameterServer::setHandFrameName(const std::string &HandName,
+                                       const std::string &FrameName) {
   if (!m_initSucceeded) {
     SEND_WARNING_STREAM_MSG("Cannot set hand frame name!");
     return;
@@ -361,7 +362,9 @@ void ParameterServer::setHandFrameName(const std::string& HandName, const std::s
   else if (HandName == "Right")
     m_robot_util->m_hand_util.m_Right_Hand_Frame_Name = FrameName;
   else
-    SEND_WARNING_STREAM_MSG("Available hand names are 'Left' and 'Right', not '" + HandName + "' !");
+    SEND_WARNING_STREAM_MSG(
+        "Available hand names are 'Left' and 'Right', not '" + HandName +
+        "' !");
 }
 
 void ParameterServer::setImuJointName(const std::string &JointName) {
@@ -421,5 +424,5 @@ bool ParameterServer::isJointInRange(unsigned int id, double q) {
 void ParameterServer::display(std::ostream &os) const {
   os << "ParameterServer " << getName();
 }
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
diff --git a/src/tools/periodic-call-entity.cpp b/src/tools/periodic-call-entity.cpp
index dd03de13..56842618 100644
--- a/src/tools/periodic-call-entity.cpp
+++ b/src/tools/periodic-call-entity.cpp
@@ -13,6 +13,7 @@
 
 /* --- SOT --- */
 #include <dynamic-graph/pool.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/factory.hh>
 #include <sot/core/periodic-call-entity.hh>
@@ -27,7 +28,9 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(PeriodicCallEntity, "PeriodicCallEntity");
 /* --------------------------------------------------------------------- */
 
 PeriodicCallEntity::PeriodicCallEntity(const string &fName)
-    : Entity(fName), PeriodicCall(), triger("Tracer(" + fName + ")::triger"),
+    : Entity(fName),
+      PeriodicCall(),
+      triger("Tracer(" + fName + ")::triger"),
       trigerOnce("Tracer(" + fName + ")::trigerOnce") {
   signalRegistration(triger << trigerOnce);
 
diff --git a/src/tools/periodic-call.cpp b/src/tools/periodic-call.cpp
index f39c4698..97908081 100644
--- a/src/tools/periodic-call.cpp
+++ b/src/tools/periodic-call.cpp
@@ -12,10 +12,11 @@
 /* --------------------------------------------------------------------- */
 
 /* --- SOT --- */
-#include <algorithm>
 #include <dynamic-graph/all-commands.h>
 #include <dynamic-graph/exception-factory.h>
 #include <dynamic-graph/pool.h>
+
+#include <algorithm>
 #include <sot/core/debug.hh>
 #include <sot/core/exception-tools.hh>
 #include <sot/core/periodic-call.hh>
diff --git a/src/tools/robot-simu.cpp b/src/tools/robot-simu.cpp
index a456953d..4d3edd00 100644
--- a/src/tools/robot-simu.cpp
+++ b/src/tools/robot-simu.cpp
@@ -7,6 +7,7 @@
  */
 
 #include "sot/core/robot-simu.hh"
+
 #include <dynamic-graph/all-commands.h>
 #include <dynamic-graph/factory.h>
 
@@ -18,22 +19,24 @@ RobotSimu::RobotSimu(const std::string &inName) : Device(inName) {
   using namespace dynamicgraph::command;
   std::string docstring;
   /* Command increment. */
-  docstring = "\n"
-              "    Integrate dynamics for time step provided as input\n"
-              "\n"
-              "      take one floating point number as input\n"
-              "\n";
+  docstring =
+      "\n"
+      "    Integrate dynamics for time step provided as input\n"
+      "\n"
+      "      take one floating point number as input\n"
+      "\n";
   addCommand("increment", command::makeCommandVoid1(
                               (Device &)*this, &Device::increment, docstring));
 
   /* Set Time step. */
-  docstring = "\n"
-              "    Set the time step provided\n"
-              "\n"
-              "      take one floating point number as input\n"
-              "\n";
+  docstring =
+      "\n"
+      "    Set the time step provided\n"
+      "\n"
+      "      take one floating point number as input\n"
+      "\n";
   addCommand("setTimeStep",
              makeDirectSetter(*this, &this->timestep_, docstring));
 }
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
diff --git a/src/tools/robot-utils-py.cpp b/src/tools/robot-utils-py.cpp
index a646a33c..d4065b1f 100644
--- a/src/tools/robot-utils-py.cpp
+++ b/src/tools/robot-utils-py.cpp
@@ -11,7 +11,6 @@
 #include <boost/property_tree/ptree.hpp>
 #include <boost/python.hpp>
 #include <boost/python/suite/indexing/map_indexing_suite.hpp>
-
 #include <sot/core/robot-utils.hh>
 
 using namespace boost::python;
diff --git a/src/tools/robot-utils.cpp b/src/tools/robot-utils.cpp
index c7701e79..f6288558 100644
--- a/src/tools/robot-utils.cpp
+++ b/src/tools/robot-utils.cpp
@@ -24,6 +24,7 @@
 #endif
 
 #include <dynamic-graph/factory.h>
+
 #include <iostream>
 #include <sot/core/debug.hh>
 #include <sot/core/robot-utils.hh>
@@ -68,10 +69,8 @@ void ExtractJointMimics::go_through(pt::ptree &pt, int level, int stage) {
   if (pt.empty()) {
     /// and this is a name of a joint (stage == 3) update the
     /// curret_joint_name_ variable.
-    if (stage == 3)
-      current_joint_name_ = pt.data();
+    if (stage == 3) current_joint_name_ = pt.data();
   } else {
-
     /// This is not a leaf
     for (auto pos : pt) {
       int new_stage = stage;
@@ -83,14 +82,12 @@ void ExtractJointMimics::go_through(pt::ptree &pt, int level, int stage) {
       else if (pos.first == "<xmlattr>") {
         /// we are exploring the xml attributes of a joint
         /// -> continue the exploration
-        if (stage == 1)
-          new_stage = 2;
+        if (stage == 1) new_stage = 2;
       }
       /// The xml attribute of the joint is the name
       /// next leaf is the name we are possibly looking for
       else if (pos.first == "name") {
-        if (stage == 2)
-          new_stage = 3;
+        if (stage == 2) new_stage = 3;
       }
       /// The exploration of the tree tracback on the joint
       /// and find that this is a mimic joint.
@@ -157,8 +154,7 @@ void ForceUtil::set_force_id_to_limits(const Index &force_id,
 Index ForceUtil::get_id_from_name(const std::string &name) {
   std::map<std::string, Index>::const_iterator it;
   it = m_name_to_force_id.find(name);
-  if (it != m_name_to_force_id.end())
-    return it->second;
+  if (it != m_name_to_force_id.end()) return it->second;
   return -1;
 }
 
@@ -168,8 +164,7 @@ std::string joint_default_rtn("Joint name not found");
 const std::string &ForceUtil::get_name_from_id(Index idx) {
   std::map<Index, std::string>::const_iterator it;
   it = m_force_id_to_name.find(idx);
-  if (it != m_force_id_to_name.end())
-    return it->second;
+  if (it != m_force_id_to_name.end()) return it->second;
   return force_default_rtn;
 }
 
@@ -187,7 +182,7 @@ const ForceLimits &ForceUtil::get_limits_from_id(Index force_id) {
   std::map<Index, ForceLimits>::const_iterator iter =
       m_force_id_to_limits.find(force_id);
   if (iter == m_force_id_to_limits.end())
-    return VoidForceLimits; // Returns void instance
+    return VoidForceLimits;  // Returns void instance
   return iter->second;
 }
 
@@ -195,7 +190,7 @@ ForceLimits ForceUtil::cp_get_limits_from_id(Index force_id) {
   std::map<Index, ForceLimits>::const_iterator iter =
       m_force_id_to_limits.find(force_id);
   if (iter == m_force_id_to_limits.end())
-    return VoidForceLimits; // Returns void instance
+    return VoidForceLimits;  // Returns void instance
   return iter->second;
 }
 
@@ -240,8 +235,7 @@ void RobotUtil::set_joint_limits_for_id(const Index &idx, const double &lq,
 
 const JointLimits &RobotUtil::get_joint_limits_from_id(Index id) {
   std::map<Index, JointLimits>::const_iterator iter = m_limits_map.find(id);
-  if (iter == m_limits_map.end())
-    return VoidJointLimits;
+  if (iter == m_limits_map.end()) return VoidJointLimits;
   return iter->second;
 }
 JointLimits RobotUtil::cp_get_joint_limits_from_id(Index id) {
@@ -263,15 +257,13 @@ void RobotUtil::create_id_to_name_map() {
 
 const Index &RobotUtil::get_id_from_name(const std::string &name) {
   std::map<std::string, Index>::const_iterator it = m_name_to_id.find(name);
-  if (it == m_name_to_id.end())
-    return VoidIndex;
+  if (it == m_name_to_id.end()) return VoidIndex;
   return it->second;
 }
 
 const std::string &RobotUtil::get_name_from_id(Index id) {
   std::map<Index, std::string>::const_iterator iter = m_id_to_name.find(id);
-  if (iter == m_id_to_name.end())
-    return joint_default_rtn;
+  if (iter == m_id_to_name.end()) return joint_default_rtn;
   return iter->second;
 }
 
@@ -386,7 +378,7 @@ bool RobotUtil::base_sot_to_urdf(ConstRefVector q_sot, RefVector q_urdf) {
   const Eigen::AngleAxisd yawAngle(y, Eigen::Vector3d::UnitZ());
   const Eigen::Quaternion<double> quat = yawAngle * pitchAngle * rollAngle;
 
-  q_urdf[0] = q_sot[0]; // BASE
+  q_urdf[0] = q_sot[0];  // BASE
   q_urdf[1] = q_sot[1];
   q_urdf[2] = q_sot[2];
   q_urdf[3] = quat.x();
@@ -499,7 +491,7 @@ bool base_sot_to_urdf(ConstRefVector q_sot, RefVector q_urdf) {
   const Eigen::AngleAxisd yawAngle(y, Eigen::Vector3d::UnitZ());
   const Eigen::Quaternion<double> quat = yawAngle * pitchAngle * rollAngle;
 
-  q_urdf[0] = q_sot[0]; // BASE
+  q_urdf[0] = q_sot[0];  // BASE
   q_urdf[1] = q_sot[1];
   q_urdf[2] = q_sot[2];
   q_urdf[3] = quat.x();
@@ -529,21 +521,18 @@ std::shared_ptr<std::vector<std::string> > getListOfRobots() {
 RobotUtilShrPtr getRobotUtil(std::string &robotName) {
   std::map<std::string, RobotUtilShrPtr>::iterator it =
       sgl_map_name_to_robot_util.find(robotName);
-  if (it != sgl_map_name_to_robot_util.end())
-    return it->second;
+  if (it != sgl_map_name_to_robot_util.end()) return it->second;
   return RefVoidRobotUtil();
 }
 
 bool isNameInRobotUtil(std::string &robotName) {
   std::map<std::string, RobotUtilShrPtr>::iterator it =
       sgl_map_name_to_robot_util.find(robotName);
-  if (it != sgl_map_name_to_robot_util.end())
-    return true;
+  if (it != sgl_map_name_to_robot_util.end()) return true;
   return false;
 }
 
 RobotUtilShrPtr createRobotUtil(std::string &robotName) {
-
   std::map<std::string, RobotUtilShrPtr>::iterator it =
       sgl_map_name_to_robot_util.find(robotName);
   if (it == sgl_map_name_to_robot_util.end()) {
@@ -553,5 +542,5 @@ RobotUtilShrPtr createRobotUtil(std::string &robotName) {
   }
   return RefVoidRobotUtil();
 }
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
diff --git a/src/tools/sequencer.cpp b/src/tools/sequencer.cpp
index ececc599..14de3024 100644
--- a/src/tools/sequencer.cpp
+++ b/src/tools/sequencer.cpp
@@ -9,6 +9,7 @@
 
 #include <dynamic-graph/factory.h>
 #include <dynamic-graph/pool.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/exception-tools.hh>
 #include <sot/core/sequencer.hh>
@@ -20,7 +21,10 @@ using namespace dynamicgraph;
 DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(Sequencer, "Sequencer");
 
 Sequencer::Sequencer(const std::string &name)
-    : Entity(name), timeInit(-1), playMode(false), outputStreamPtr(NULL),
+    : Entity(name),
+      timeInit(-1),
+      playMode(false),
+      outputStreamPtr(NULL),
       noOutput(false),
       triggerSOUT(boost::bind(&Sequencer::trigger, this, _1, _2), sotNOSIGNAL,
                   "Sequencer(" + name + ")::output(dummy)::trigger") {
@@ -44,11 +48,11 @@ Sequencer::~Sequencer(void) {
 /* --- SPECIFIC EVENT ------------------------------------------------------- */
 
 class sotEventTaskBased : public Sequencer::sotEventAbstract {
-protected:
+ protected:
   TaskAbstract *taskPtr;
   const std::string defaultTaskName;
 
-public:
+ public:
   sotEventTaskBased(const std::string name = "", TaskAbstract *task = NULL)
       : sotEventAbstract(name), taskPtr(task), defaultTaskName("NULL") {}
 
@@ -77,7 +81,7 @@ public:
 };
 
 class sotEventAddATask : public sotEventTaskBased {
-public:
+ public:
   sotEventAddATask(const std::string name = "", TaskAbstract *task = NULL)
       : sotEventTaskBased(name, task) {
     eventType = EVENT_ADD;
@@ -87,8 +91,7 @@ public:
     sotDEBUGIN(15);
     sotDEBUG(45) << "Sot = " << sotptr << ". Task = " << taskPtr << "."
                  << std::endl;
-    if ((NULL != sotptr) && (NULL != taskPtr))
-      sotptr->push(*taskPtr);
+    if ((NULL != sotptr) && (NULL != taskPtr)) sotptr->push(*taskPtr);
     sotDEBUGOUT(15);
   }
 
@@ -100,7 +103,7 @@ public:
 };
 
 class sotEventRemoveATask : public sotEventTaskBased {
-public:
+ public:
   sotEventRemoveATask(const std::string name = "", TaskAbstract *task = NULL)
       : sotEventTaskBased(name, task) {
     eventType = EVENT_RM;
@@ -110,8 +113,7 @@ public:
     sotDEBUGIN(15);
     sotDEBUG(45) << "Sot = " << sotptr << ". Task = " << taskPtr << "."
                  << std::endl;
-    if ((NULL != sotptr) && (NULL != taskPtr))
-      sotptr->remove(*taskPtr);
+    if ((NULL != sotptr) && (NULL != taskPtr)) sotptr->remove(*taskPtr);
     sotDEBUGOUT(15);
   }
 
@@ -123,10 +125,10 @@ public:
 };
 
 class sotEventCmd : public Sequencer::sotEventAbstract {
-protected:
+ protected:
   std::string cmd;
 
-public:
+ public:
   sotEventCmd(const std::string cmdLine = "")
       : sotEventAbstract(cmdLine + "<cmd>"), cmd(cmdLine) {
     eventType = EVENT_CMD;
@@ -177,7 +179,7 @@ void Sequencer::addTask(sotEventAbstract *task, const unsigned int timeSpec) {
 void Sequencer::rmTask(int eventType, const std::string &name,
                        const unsigned int time) {
   TaskMap::iterator listKey = taskMap.find(time);
-  if (taskMap.end() != listKey) // the time exist
+  if (taskMap.end() != listKey)  // the time exist
   {
     TaskList &tl = listKey->second;
     for (TaskList::iterator itL = tl.begin(); itL != tl.end(); ++itL) {
@@ -188,8 +190,7 @@ void Sequencer::rmTask(int eventType, const std::string &name,
     }
 
     // remove the list if empty
-    if (tl.empty())
-      taskMap.erase(listKey);
+    if (tl.empty()) taskMap.erase(listKey);
   }
 }
 
@@ -213,10 +214,8 @@ void Sequencer::clearAll() {
 int &Sequencer::trigger(int &dummy, const int &timeSpec) {
   sotDEBUGIN(15);
 
-  if (!playMode)
-    return dummy;
-  if (-1 == timeInit)
-    timeInit = timeSpec;
+  if (!playMode) return dummy;
+  if (-1 == timeInit) timeInit = timeSpec;
 
   sotDEBUG(15) << "Ref time: " << (timeSpec - timeInit) << std::endl;
   TaskMap::iterator listKey = taskMap.find(timeSpec - timeInit);
@@ -245,8 +244,7 @@ int &Sequencer::trigger(int &dummy, const int &timeSpec) {
 /* --- PARAMS --------------------------------------------------------------- */
 
 void Sequencer::display(std::ostream &os) const {
-  if (noOutput)
-    return;
+  if (noOutput) return;
 
   os << "Sequencer " << getName() << "(t0=" << timeInit
      << ",mode=" << ((playMode) ? "play" : "pause") << "): " << std::endl;
diff --git a/src/tools/smooth-reach.cpp b/src/tools/smooth-reach.cpp
index c19d3662..87acebe0 100644
--- a/src/tools/smooth-reach.cpp
+++ b/src/tools/smooth-reach.cpp
@@ -9,6 +9,7 @@
 
 #include <dynamic-graph/all-commands.h>
 #include <dynamic-graph/factory.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/smooth-reach.hh>
 
@@ -21,11 +22,16 @@ SmoothReach::SmoothReach(const std::string &name)
     : Entity(name)
 
       ,
-      start(0u), goal(0u), startTime(-1), lengthTime(-1), isStarted(false),
+      start(0u),
+      goal(0u),
+      startTime(-1),
+      lengthTime(-1),
+      isStarted(false),
       isParam(true)
 
       ,
-      smoothMode(2), smoothParam(1.2)
+      smoothMode(2),
+      smoothParam(1.2)
 
       ,
       startSIN(NULL, "SmoothReach(" + name + ")::input(vector)::start"),
@@ -54,19 +60,18 @@ void SmoothReach::initCommands(void) {
 }
 
 double SmoothReach::smoothFunction(double x) {
-
   switch (smoothMode) {
-  case 0:
-    return x;
-
-  case 1: {
-    // const double smoothParam = 0.45;
-    return tanh(-smoothParam / x + smoothParam / (1 - x)) / 2 + 0.5;
-  }
-  case 2: {
-    // const double smoothParam = 1.5;
-    return atan(-smoothParam / x + smoothParam / (1 - x)) / M_PI + 0.5;
-  }
+    case 0:
+      return x;
+
+    case 1: {
+      // const double smoothParam = 0.45;
+      return tanh(-smoothParam / x + smoothParam / (1 - x)) / 2 + 0.5;
+    }
+    case 2: {
+      // const double smoothParam = 1.5;
+      return atan(-smoothParam / x + smoothParam / (1 - x)) / M_PI + 0.5;
+    }
   }
   return 0;
 }
@@ -89,8 +94,7 @@ dynamicgraph::Vector &SmoothReach::goalSOUT_function(dynamicgraph::Vector &res,
 
   if (isStarted) {
     double x = double(time - startTime) / lengthTime;
-    if (x > 1)
-      x = 1;
+    if (x > 1) x = 1;
     double x1 = smoothFunction(x);
     double x0 = 1 - x1;
     res = start * x0 + goal * x1;
diff --git a/src/tools/sot-loader.cpp b/src/tools/sot-loader.cpp
index 27ca453a..e94a3646 100644
--- a/src/tools/sot-loader.cpp
+++ b/src/tools/sot-loader.cpp
@@ -104,18 +104,21 @@ bool SotLoader::initialization() {
   // python interpreter.
   runPythonCommand("import sys, os", result, out, err);
   runPythonCommand("print(\"python version:\", sys.version)", result, out, err);
-  runPythonCommand("pythonpath = os.environ.get('PYTHONPATH', '')", result, out, err);
+  runPythonCommand("pythonpath = os.environ.get('PYTHONPATH', '')", result, out,
+                   err);
   runPythonCommand("path = []", result, out, err);
-  runPythonCommand("for p in pythonpath.split(':'):\n"
-                   "  if p not in sys.path:\n"
-                   "    path.append(p)",
-                   result, out, err);
+  runPythonCommand(
+      "for p in pythonpath.split(':'):\n"
+      "  if p not in sys.path:\n"
+      "    path.append(p)",
+      result, out, err);
   runPythonCommand("path.extend(sys.path)", result, out, err);
   runPythonCommand("sys.path = path", result, out, err);
   // used to be able to invoke rospy
-  runPythonCommand("if not hasattr(sys, \'argv\'):\n"
-                   "    sys.argv  = ['sot']",
-                   result, out, err);
+  runPythonCommand(
+      "if not hasattr(sys, \'argv\'):\n"
+      "    sys.argv  = ['sot']",
+      result, out, err);
   // help setting signals
   runPythonCommand("import numpy as np", result, out, err);
   // Debug print.
diff --git a/src/tools/switch-python-module-py.cc b/src/tools/switch-python-module-py.cc
index 0c9f87c8..fbc6e83e 100644
--- a/src/tools/switch-python-module-py.cc
+++ b/src/tools/switch-python-module-py.cc
@@ -1,11 +1,13 @@
-#include "dynamic-graph/python/module.hh"
 #include <sot/core/switch.hh>
 
+#include "dynamic-graph/python/module.hh"
+
 namespace dg = dynamicgraph;
 typedef bp::return_value_policy<bp::reference_existing_object>
     reference_existing_object;
 
-template <typename T, typename Time> void exposeSwitch() {
+template <typename T, typename Time>
+void exposeSwitch() {
   typedef dg::sot::Switch<T, Time> E_t;
   typedef typename E_t::Base B_t;
   dg::python::exposeEntity<E_t, bp::bases<dg::Entity>,
diff --git a/src/tools/switch.cpp b/src/tools/switch.cpp
index f77aba0a..2822a8e3 100644
--- a/src/tools/switch.cpp
+++ b/src/tools/switch.cpp
@@ -1,10 +1,10 @@
 // Copyright (c) 2017, Joseph Mirabel
 // Authors: Joseph Mirabel (joseph.mirabel@laas.fr)
 
-#include <sot/core/switch.hh>
-
 #include <dynamic-graph/factory.h>
 
+#include <sot/core/switch.hh>
+
 #include "type-name-helper.hh"
 
 namespace dynamicgraph {
@@ -21,12 +21,14 @@ std::string VariadicAbstract<Tin, Tout, Time>::getTypeOutName(void) {
 template class VariadicAbstract<Vector, Vector, int>;
 
 typedef Switch<Vector, int> SwitchVector;
-template <> DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(SwitchVector, "SwitchVector");
+template <>
+DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(SwitchVector, "SwitchVector");
 
 template class VariadicAbstract<bool, bool, int>;
 
 typedef Switch<bool, int> SwitchBool;
-template <> DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(SwitchBool, "SwitchBoolean");
+template <>
+DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(SwitchBool, "SwitchBoolean");
 
 template class VariadicAbstract<MatrixHomogeneous, MatrixHomogeneous, int>;
 
@@ -34,5 +36,5 @@ typedef Switch<MatrixHomogeneous, int> SwitchMatrixHomogeneous;
 template <>
 DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(SwitchMatrixHomogeneous,
                                    "SwitchMatrixHomogeneous");
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
diff --git a/src/tools/time-stamp.cpp b/src/tools/time-stamp.cpp
index f548edcd..e80bd339 100644
--- a/src/tools/time-stamp.cpp
+++ b/src/tools/time-stamp.cpp
@@ -13,6 +13,7 @@
 
 /* SOT */
 #include <dynamic-graph/factory.h>
+
 #include <sot/core/macros-signal.hh>
 #include <sot/core/matrix-geometry.hh>
 #include <sot/core/time-stamp.hh>
@@ -28,7 +29,9 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(TimeStamp, "TimeStamp");
 
 /* --- CONSTRUCTION ---------------------------------------------------- */
 TimeStamp::TimeStamp(const std::string &name)
-    : Entity(name), offsetValue(0), offsetSet(false),
+    : Entity(name),
+      offsetValue(0),
+      offsetSet(false),
       timeSOUT("TimeStamp(" + name + ")::output(vector2)::time"),
       timeDoubleSOUT("TimeStamp(" + name + ")::output(double)::timeDouble"),
       timeOnceSOUT(boost::bind(&TimeStamp::getTimeStamp, this, _1, _2),
@@ -68,8 +71,7 @@ dynamicgraph::Vector &TimeStamp::getTimeStamp(dynamicgraph::Vector &res,
                                               const int & /*time*/) {
   sotDEBUGIN(15);
   gettimeofday(&val, NULL);
-  if (res.size() != 2)
-    res.resize(2);
+  if (res.size() != 2) res.resize(2);
 
   res(0) = static_cast<double>(val.tv_sec);
   res(1) = static_cast<double>(val.tv_usec);
diff --git a/src/tools/timer.cpp b/src/tools/timer.cpp
index bb70ba81..f4643b72 100644
--- a/src/tools/timer.cpp
+++ b/src/tools/timer.cpp
@@ -13,6 +13,7 @@
 
 /* SOT */
 #include <dynamic-graph/linear-algebra.h>
+
 #include <sot/core/factory.hh>
 #include <sot/core/matrix-geometry.hh>
 #include <sot/core/timer.hh>
@@ -25,17 +26,20 @@ using namespace dynamicgraph;
 /* --------------------------------------------------------------------- */
 
 typedef Timer<dynamicgraph::Vector> timevect;
-template <> DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(timevect, "TimerVector");
+template <>
+DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(timevect, "TimerVector");
 
 typedef Timer<dynamicgraph::Matrix> timematrix;
-template <> DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(timematrix, "TimerMatrix");
+template <>
+DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(timematrix, "TimerMatrix");
 
 typedef Timer<MatrixHomogeneous> timematrixhomo;
 template <>
 DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(timematrixhomo, "TimerMatrixHomo");
 
 typedef Timer<double> timedouble;
-template <> DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(timedouble, "TimerDouble");
+template <>
+DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(timedouble, "TimerDouble");
 
 /* --------------------------------------------------------------------- */
 void cmdChrono(const std::string &cmdLine, std::istringstream &cmdArg,
diff --git a/src/tools/trajectory.cpp b/src/tools/trajectory.cpp
index 560cb686..3036a5de 100644
--- a/src/tools/trajectory.cpp
+++ b/src/tools/trajectory.cpp
@@ -30,7 +30,8 @@ namespace dynamicgraph {
 namespace sot {
 
 RulesJointTrajectory::RulesJointTrajectory(Trajectory &aTrajectoryToFill)
-    : TrajectoryToFill_(aTrajectoryToFill), dbg_level(0),
+    : TrajectoryToFill_(aTrajectoryToFill),
+      dbg_level(0),
       float_str_re("[-0-9]+\\.[0-9]*"),
 
       // Header Regular Expression
@@ -46,16 +47,21 @@ RulesJointTrajectory::RulesJointTrajectory(Trajectory &aTrajectoryToFill)
 
       // Point
       point_value_str_re("(" + float_str_re + "+)|(?:)"),
-      list_of_pv_str_re(point_value_str_re + "(\\,|\\))"), bg_pt_str_re("\\("),
-      end_pt_str_re("\\)"), comma_pt_str_re("\\,\\("),
+      list_of_pv_str_re(point_value_str_re + "(\\,|\\))"),
+      bg_pt_str_re("\\("),
+      end_pt_str_re("\\)"),
+      comma_pt_str_re("\\,\\("),
 
       // Liste of points
       bg_liste_of_pts_str_re("\\,\\("),
 
       // Reg Exps
-      header_re(header_str_re), list_of_jn_re(list_of_jn_str_re),
-      list_of_pv_re(list_of_pv_str_re), bg_pt_re(bg_pt_str_re),
-      end_pt_re(end_pt_str_re), comma_pt_re(comma_pt_str_re),
+      header_re(header_str_re),
+      list_of_jn_re(list_of_jn_str_re),
+      list_of_pv_re(list_of_pv_str_re),
+      bg_pt_re(bg_pt_str_re),
+      end_pt_re(end_pt_str_re),
+      comma_pt_re(comma_pt_str_re),
       bg_liste_of_pts_re(bg_liste_of_pts_str_re) {}
 
 bool RulesJointTrajectory::search_exp_sub_string(
@@ -65,7 +71,6 @@ bool RulesJointTrajectory::search_exp_sub_string(
 
   boost::match_flag_type flags = boost::match_extra;
   if (boost::regex_search(text, what, e, flags)) {
-
     if (dbg_level > 5) {
       std::cout << "** Match found **\n   Sub-Expressions:" << what.size()
                 << std::endl;
@@ -83,12 +88,10 @@ bool RulesJointTrajectory::search_exp_sub_string(
       return true;
     }
   } else {
-    if (dbg_level > 5)
-      std::cout << "** No Match found **\n";
+    if (dbg_level > 5) std::cout << "** No Match found **\n";
     sub_text = text;
     nb_failures++;
-    if (nb_failures > 100)
-      return false;
+    if (nb_failures > 100) return false;
   }
   return false;
 }
@@ -136,8 +139,7 @@ void RulesJointTrajectory::parse_joint_names(
       std::string sep_char;
       sep_char = what[2];
 
-      if (sep_char == ")")
-        joint_names_loop = false;
+      if (sep_char == ")") joint_names_loop = false;
       if (dbg_level > 5) {
         std::cout << "joint_name:" << joint_name << " " << sep_char
                   << std::endl;
@@ -181,8 +183,7 @@ bool RulesJointTrajectory::parse_seq(std::string &trajectory,
       } else if (what.size() == 1)
         sep_char = what[0];
 
-      if (sep_char == ")")
-        joint_seq_loop = false;
+      if (sep_char == ")") joint_seq_loop = false;
 
     } else {
       return true;
@@ -203,31 +204,27 @@ bool RulesJointTrajectory::parse_point(std::string &trajectory,
     return false;
   sub_text2 = sub_text1;
 
-  if (!parse_seq(sub_text2, sub_text1, aJTP.positions_))
-    return false;
+  if (!parse_seq(sub_text2, sub_text1, aJTP.positions_)) return false;
   sub_text2 = sub_text1;
 
   if (!search_exp_sub_string(sub_text2, what, comma_pt_re, sub_text1))
     return false;
   sub_text2 = sub_text1;
 
-  if (!parse_seq(sub_text2, sub_text1, aJTP.velocities_))
-    return false;
+  if (!parse_seq(sub_text2, sub_text1, aJTP.velocities_)) return false;
   sub_text2 = sub_text1;
 
   if (!search_exp_sub_string(sub_text2, what, comma_pt_re, sub_text1))
     return false;
   sub_text2 = sub_text1;
 
-  if (!parse_seq(sub_text2, sub_text1, aJTP.accelerations_))
-    return false;
+  if (!parse_seq(sub_text2, sub_text1, aJTP.accelerations_)) return false;
   sub_text2 = sub_text1;
 
   if (!search_exp_sub_string(sub_text2, what, comma_pt_re, sub_text1))
     return false;
   sub_text2 = sub_text1;
-  if (!parse_seq(sub_text2, sub_text1, aJTP.efforts_))
-    return false;
+  if (!parse_seq(sub_text2, sub_text1, aJTP.efforts_)) return false;
 
   TrajectoryToFill_.points_.push_back(aJTP);
   return true;
@@ -248,8 +245,7 @@ bool RulesJointTrajectory::parse_points(std::string &trajectory,
       return false;
     sub_text2 = sub_text1;
 
-    if (!parse_point(sub_text2, sub_text1))
-      return false;
+    if (!parse_point(sub_text2, sub_text1)) return false;
     sub_text2 = sub_text1;
 
     if (!search_exp_sub_string(sub_text2, what, end_pt_re, sub_text1))
@@ -262,8 +258,7 @@ bool RulesJointTrajectory::parse_points(std::string &trajectory,
     std::string sep_char;
     sep_char = what[1];
 
-    if (sep_char == ")")
-      joint_points_loop = false;
+    if (sep_char == ")") joint_points_loop = false;
 
   } while (joint_points_loop);
 
@@ -320,5 +315,5 @@ void Trajectory::display(std::ostream &os) const {
   }
 }
 
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace sot
+}  // namespace dynamicgraph
diff --git a/src/tools/type-name-helper.hh b/src/tools/type-name-helper.hh
index 61c6308f..22b10ba9 100644
--- a/src/tools/type-name-helper.hh
+++ b/src/tools/type-name-helper.hh
@@ -13,7 +13,8 @@
 
 namespace dynamicgraph {
 namespace sot {
-template <typename TypeRef> struct TypeNameHelper {
+template <typename TypeRef>
+struct TypeNameHelper {
   static inline std::string typeName();
 };
 template <typename TypeRef>
@@ -21,9 +22,10 @@ inline std::string TypeNameHelper<TypeRef>::typeName() {
   return "unspecified";
 }
 
-#define ADD_KNOWN_TYPE(typeid)                                                 \
-  template <> inline std::string TypeNameHelper<typeid>::typeName() {          \
-    return #typeid;                                                            \
+#define ADD_KNOWN_TYPE(typeid)                            \
+  template <>                                             \
+  inline std::string TypeNameHelper<typeid>::typeName() { \
+    return #typeid;                                       \
   }
 
 ADD_KNOWN_TYPE(bool)
diff --git a/src/tools/utils-windows.cpp b/src/tools/utils-windows.cpp
index aef60693..da4189a0 100644
--- a/src/tools/utils-windows.cpp
+++ b/src/tools/utils-windows.cpp
@@ -8,9 +8,8 @@
  */
 
 #ifdef WIN32
-#include <sot/core/utils-windows.hh>
-
 #include < Windows.h >
+#include <sot/core/utils-windows.hh>
 #if defined(_MSC_VER) || defined(_MSC_EXTENSIONS)
 #define DELTA_EPOCH_IN_MICROSECS 11644473600000000Ui64
 #else
diff --git a/src/traces/reader.cpp b/src/traces/reader.cpp
index 21b18aec..def28065 100644
--- a/src/traces/reader.cpp
+++ b/src/traces/reader.cpp
@@ -12,12 +12,12 @@
 /* --------------------------------------------------------------------- */
 
 /* SOT */
-#include <sot/core/debug.hh>
-#include <sot/core/reader.hh>
-
-#include <boost/bind.hpp>
 #include <dynamic-graph/all-commands.h>
 #include <dynamic-graph/factory.h>
+
+#include <boost/bind.hpp>
+#include <sot/core/debug.hh>
+#include <sot/core/reader.hh>
 #include <sstream>
 
 using namespace dynamicgraph;
@@ -31,12 +31,17 @@ DYNAMICGRAPH_FACTORY_ENTITY_PLUGIN(sotReader, "Reader");
 /* --------------------------------------------------------------------- */
 
 sotReader::sotReader(const std::string n)
-    : Entity(n), selectionSIN(NULL, "Reader(" + n + ")::input(flag)::selec"),
+    : Entity(n),
+      selectionSIN(NULL, "Reader(" + n + ")::input(flag)::selec"),
       vectorSOUT(boost::bind(&sotReader::getNextData, this, _1, _2),
                  sotNOSIGNAL, "Reader(" + n + ")::vector"),
       matrixSOUT(boost::bind(&sotReader::getNextMatrix, this, _1, _2),
                  vectorSOUT, "Reader(" + n + ")::matrix"),
-      dataSet(), currentData(), iteratorSet(false), rows(0), cols(0) {
+      dataSet(),
+      currentData(),
+      iteratorSet(false),
+      rows(0),
+      cols(0) {
   signalRegistration(selectionSIN << vectorSOUT << matrixSOUT);
   selectionSIN = true;
   vectorSOUT.setNeedUpdateFromAllChildren(true);
@@ -72,8 +77,7 @@ void sotReader::load(const string &filename) {
         break;
       sotDEBUG(45) << "New data = " << x << std::endl;
     }
-    if (newline.size() > 0)
-      dataSet.push_back(newline);
+    if (newline.size() > 0) dataSet.push_back(newline);
   }
 
   sotDEBUGOUT(15);
@@ -116,14 +120,12 @@ dynamicgraph::Vector &sotReader::getNextData(dynamicgraph::Vector &res,
 
   unsigned int dim = 0;
   for (unsigned int i = 0; i < curr.size(); ++i)
-    if (selection(i))
-      dim++;
+    if (selection(i)) dim++;
 
   res.resize(dim);
   int cursor = 0;
   for (unsigned int i = 0; i < curr.size(); ++i)
-    if (selection(i))
-      res(cursor++) = curr[i];
+    if (selection(i)) res(cursor++) = curr[i];
 
   sotDEBUGOUT(15);
   return res;
@@ -133,13 +135,11 @@ dynamicgraph::Matrix &sotReader::getNextMatrix(dynamicgraph::Matrix &res,
                                                const unsigned int time) {
   sotDEBUGIN(15);
   const dynamicgraph::Vector &vect = vectorSOUT(time);
-  if (vect.size() < rows * cols)
-    return res;
+  if (vect.size() < rows * cols) return res;
 
   res.resize(rows, cols);
   for (int i = 0; i < rows; ++i)
-    for (int j = 0; j < cols; ++j)
-      res(i, j) = vect(i * cols + j);
+    for (int j = 0; j < cols; ++j) res(i, j) = vect(i * cols + j);
 
   sotDEBUGOUT(15);
   return res;
diff --git a/src/utils/stop-watch.cpp b/src/utils/stop-watch.cpp
index 01f4080f..0157fce9 100644
--- a/src/utils/stop-watch.cpp
+++ b/src/utils/stop-watch.cpp
@@ -28,11 +28,13 @@ WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
 #include <sys/time.h>
 #else
 #include <Windows.h>
+
 #include <iomanip>
 #endif
 
+#include <iomanip>  // std::setprecision
+
 #include "sot/core/stop-watch.hh"
-#include <iomanip> // std::setprecision
 
 using std::map;
 using std::ostringstream;
@@ -42,7 +44,7 @@ using std::string;
 //#define STOP_PROFILER(name) getProfiler().stop(name)
 
 Stopwatch &getProfiler() {
-  static Stopwatch s(REAL_TIME); // alternatives are CPU_TIME and REAL_TIME
+  static Stopwatch s(REAL_TIME);  // alternatives are CPU_TIME and REAL_TIME
   return s;
 }
 
@@ -60,12 +62,10 @@ bool Stopwatch::performance_exists(string perf_name) {
 
 long double Stopwatch::take_time() {
   if (mode == CPU_TIME) {
-
     // Use ctime
     return clock();
 
   } else if (mode == REAL_TIME) {
-
     // Query operating system
 
 #ifdef WIN32
@@ -80,8 +80,8 @@ long double Stopwatch::take_time() {
     intervals.HighPart = ft.dwHighDateTime;
 
     long double measure = intervals.QuadPart;
-    measure -= 116444736000000000.0; // Convert to UNIX epoch time
-    measure /= 10000000.0;           // Convert to seconds
+    measure -= 116444736000000000.0;  // Convert to UNIX epoch time
+    measure /= 10000000.0;            // Convert to seconds
 
     return measure;
 #else
@@ -90,8 +90,8 @@ long double Stopwatch::take_time() {
     gettimeofday(&tv, NULL);
 
     long double measure = tv.tv_usec;
-    measure /= 1000000.0; // Convert to seconds
-    measure += tv.tv_sec; // Add seconds part
+    measure /= 1000000.0;  // Convert to seconds
+    measure += tv.tv_sec;  // Add seconds part
 
     return measure;
 #endif
@@ -103,8 +103,7 @@ long double Stopwatch::take_time() {
 }
 
 void Stopwatch::start(string perf_name) {
-  if (!active)
-    return;
+  if (!active) return;
 
   // Just works if not already present
   records_of->insert(make_pair(perf_name, PerformanceData()));
@@ -122,8 +121,7 @@ void Stopwatch::start(string perf_name) {
 }
 
 void Stopwatch::stop(string perf_name) {
-  if (!active)
-    return;
+  if (!active) return;
 
   long double clock_end = take_time();
 
@@ -134,21 +132,18 @@ void Stopwatch::stop(string perf_name) {
   PerformanceData &perf_info = records_of->find(perf_name)->second;
 
   // check whether the performance has been reset
-  if (perf_info.clock_start == 0)
-    return;
+  if (perf_info.clock_start == 0) return;
 
   perf_info.stops++;
   long double lapse = clock_end - perf_info.clock_start;
 
-  if (mode == CPU_TIME)
-    lapse /= (double)CLOCKS_PER_SEC;
+  if (mode == CPU_TIME) lapse /= (double)CLOCKS_PER_SEC;
 
   // Update last time
   perf_info.last_time = lapse;
 
   // Update min/max time
-  if (lapse >= perf_info.max_time)
-    perf_info.max_time = lapse;
+  if (lapse >= perf_info.max_time) perf_info.max_time = lapse;
   if (lapse <= perf_info.min_time || perf_info.min_time == 0)
     perf_info.min_time = lapse;
 
@@ -157,8 +152,7 @@ void Stopwatch::stop(string perf_name) {
 }
 
 void Stopwatch::pause(string perf_name) {
-  if (!active)
-    return;
+  if (!active) return;
 
   long double clock_end = clock();
 
@@ -169,8 +163,7 @@ void Stopwatch::pause(string perf_name) {
   PerformanceData &perf_info = records_of->find(perf_name)->second;
 
   // check whether the performance has been reset
-  if (perf_info.clock_start == 0)
-    return;
+  if (perf_info.clock_start == 0) return;
 
   long double lapse = clock_end - perf_info.clock_start;
 
@@ -180,8 +173,7 @@ void Stopwatch::pause(string perf_name) {
 }
 
 void Stopwatch::reset_all() {
-  if (!active)
-    return;
+  if (!active) return;
 
   map<string, PerformanceData>::iterator it;
 
@@ -191,8 +183,7 @@ void Stopwatch::reset_all() {
 }
 
 void Stopwatch::report_all(int precision, std::ostream &output) {
-  if (!active)
-    return;
+  if (!active) return;
 
   output << "\n*** PROFILING RESULTS [ms] (min - avg - max - lastTime - "
             "nSamples - totalTime) ***\n";
@@ -203,8 +194,7 @@ void Stopwatch::report_all(int precision, std::ostream &output) {
 }
 
 void Stopwatch::reset(string perf_name) {
-  if (!active)
-    return;
+  if (!active) return;
 
   // Try to recover performance data
   if (!performance_exists(perf_name))
@@ -232,8 +222,7 @@ void Stopwatch::turn_off() {
 }
 
 void Stopwatch::report(string perf_name, int precision, std::ostream &output) {
-  if (!active)
-    return;
+  if (!active) return;
 
   // Try to recover performance data
   if (!performance_exists(perf_name))
@@ -268,8 +257,7 @@ long double Stopwatch::get_time_so_far(string perf_name) {
   long double lapse =
       (take_time() - (records_of->find(perf_name)->second).clock_start);
 
-  if (mode == CPU_TIME)
-    lapse /= (double)CLOCKS_PER_SEC;
+  if (mode == CPU_TIME) lapse /= (double)CLOCKS_PER_SEC;
 
   return lapse;
 }
diff --git a/tests/CMakeLists.txt b/tests/CMakeLists.txt
index 0253e94f..197a2459 100644
--- a/tests/CMakeLists.txt
+++ b/tests/CMakeLists.txt
@@ -120,7 +120,7 @@ FOREACH(path ${tests})
   TARGET_LINK_LIBRARIES(${test} PRIVATE ${PROJECT_NAME}
     Boost::unit_test_framework
     ${TEST_${test}_LIBS} ${TEST_${test}_EXT_LIBS})
-  
+
   # add some preprocessor variable
   TARGET_COMPILE_DEFINITIONS(
     ${test}
diff --git a/tests/control/test_control_admittance.cpp b/tests/control/test_control_admittance.cpp
index 9e1e1b5d..198225f2 100644
--- a/tests/control/test_control_admittance.cpp
+++ b/tests/control/test_control_admittance.cpp
@@ -16,6 +16,7 @@ using namespace std;
 
 #include <dynamic-graph/entity.h>
 #include <dynamic-graph/factory.h>
+
 #include <sot/core/admittance-control-op-point.hh>
 #include <sstream>
 
diff --git a/tests/control/test_control_pd.cpp b/tests/control/test_control_pd.cpp
index 2baa3a14..087b7b01 100644
--- a/tests/control/test_control_pd.cpp
+++ b/tests/control/test_control_pd.cpp
@@ -17,6 +17,7 @@ using namespace std;
 
 #include <dynamic-graph/entity.h>
 #include <dynamic-graph/factory.h>
+
 #include <sot/core/control-pd.hh>
 #include <sstream>
 
diff --git a/tests/factory/test_factory.cpp b/tests/factory/test_factory.cpp
index 03209df7..f2376e77 100644
--- a/tests/factory/test_factory.cpp
+++ b/tests/factory/test_factory.cpp
@@ -10,16 +10,17 @@
 /* -------------------------------------------------------------------------- */
 /* --- INCLUDES ------------------------------------------------------------- */
 /* -------------------------------------------------------------------------- */
-#include <iostream>
-#include <string>
-
-#include "../test-paths.h"
 #include <dynamic-graph/entity.h>
 #include <dynamic-graph/linear-algebra.h>
+
+#include <iostream>
 #include <sot/core/debug.hh>
 #include <sot/core/exception-feature.hh>
 #include <sot/core/factory.hh>
 #include <sot/core/feature-visual-point.hh>
+#include <string>
+
+#include "../test-paths.h"
 using namespace std;
 using namespace dynamicgraph::sot;
 using namespace dg;
@@ -37,7 +38,7 @@ typedef void *sotPluginKey;
 #endif
 
 class TestFeature : public FeatureAbstract {
-public:
+ public:
   TestFeature(void) : FeatureAbstract("") {}
   virtual ~TestFeature(void) {}
   virtual unsigned int &getDimension(unsigned int &res, int /*time*/) {
@@ -56,7 +57,6 @@ public:
 };
 
 int main() {
-
   sotDEBUG(0) << "# In {" << endl;
   //   Entity test("");
   //   ExceptionFeature t2(ExceptionFeature::BAD_INIT);
diff --git a/tests/features/test_feature_generic.cpp b/tests/features/test_feature_generic.cpp
index 87651211..463feaf8 100644
--- a/tests/features/test_feature_generic.cpp
+++ b/tests/features/test_feature_generic.cpp
@@ -11,23 +11,21 @@
 /* --- INCLUDES ------------------------------------------------------------- */
 /* -------------------------------------------------------------------------- */
 #include <iostream>
-
 #include <pinocchio/algorithm/frames.hpp>
 #include <pinocchio/algorithm/jacobian.hpp>
 #include <pinocchio/algorithm/joint-configuration.hpp>
 #include <pinocchio/algorithm/kinematics.hpp>
 #include <pinocchio/multibody/data.hpp>
+#include <pinocchio/multibody/liegroup/liegroup.hpp>
 #include <pinocchio/multibody/model.hpp>
 #include <pinocchio/parsers/sample-models.hpp>
 
-#include <pinocchio/multibody/liegroup/liegroup.hpp>
-
 #define BOOST_TEST_MODULE features
-#include <boost/test/unit_test.hpp>
-
-#include <Eigen/SVD>
 #include <dynamic-graph/factory.h>
 #include <dynamic-graph/linear-algebra.h>
+
+#include <Eigen/SVD>
+#include <boost/test/unit_test.hpp>
 #include <sot/core/debug.hh>
 #include <sot/core/feature-abstract.hh>
 #include <sot/core/feature-generic.hh>
@@ -47,33 +45,36 @@ typedef pinocchio::CartesianProductOperation<
 typedef pinocchio::SpecialEuclideanOperationTpl<3, double> SE3_t;
 
 namespace internal {
-template <Representation_t representation> struct LG_t {
+template <Representation_t representation>
+struct LG_t {
   typedef typename boost::mpl::if_c<representation == SE3Representation, SE3_t,
                                     R3xSO3_t>::type type;
 };
-} // namespace internal
-} // namespace sot
-} // namespace dynamicgraph
+}  // namespace internal
+}  // namespace sot
+}  // namespace dynamicgraph
 
 using namespace std;
 using namespace dynamicgraph::sot;
 using namespace dynamicgraph;
 
-#define EIGEN_VECTOR_IS_APPROX(Va, Vb, precision)                              \
-  BOOST_CHECK_MESSAGE((Va).isApprox(Vb, precision),                            \
-                      "check " #Va ".isApprox(" #Vb ") failed "                \
-                      "[\n"                                                    \
-                          << (Va).transpose() << "\n!=\n"                      \
+#define EIGEN_VECTOR_IS_APPROX(Va, Vb, precision)         \
+  BOOST_CHECK_MESSAGE((Va).isApprox(Vb, precision),       \
+                      "check " #Va ".isApprox(" #Vb       \
+                      ") failed "                         \
+                      "[\n"                               \
+                          << (Va).transpose() << "\n!=\n" \
                           << (Vb).transpose() << "\n]")
-#define EIGEN_MATRIX_IS_APPROX(Va, Vb, precision)                              \
-  BOOST_CHECK_MESSAGE((Va).isApprox(Vb, precision),                            \
-                      "check " #Va ".isApprox(" #Vb ") failed "                \
-                      "[\n"                                                    \
-                          << (Va) << "\n!=\n"                                  \
-                          << (Vb) << "\n]")
+#define EIGEN_MATRIX_IS_APPROX(Va, Vb, precision)                           \
+  BOOST_CHECK_MESSAGE((Va).isApprox(Vb, precision), "check " #Va            \
+                                                    ".isApprox(" #Vb        \
+                                                    ") failed "             \
+                                                    "[\n"                   \
+                                                        << (Va) << "\n!=\n" \
+                                                        << (Vb) << "\n]")
 
 class FeatureTestBase {
-public:
+ public:
   Task task_;
   int time_;
   dynamicgraph::Vector expectedTaskOutput_;
@@ -161,13 +162,15 @@ public:
 };
 
 class TestFeatureGeneric : public FeatureTestBase {
-public:
+ public:
   FeatureGeneric feature_, featureDes_;
   int dim_;
 
   TestFeatureGeneric(unsigned dim, const std::string &name)
-      : FeatureTestBase(dim, name), feature_("feature" + name),
-        featureDes_("featureDes" + name), dim_(dim) {
+      : FeatureTestBase(dim, name),
+        feature_("feature" + name),
+        featureDes_("featureDes" + name),
+        dim_(dim) {
     feature_.setReference(&featureDes_);
     feature_.selectionSIN = Flags(true);
 
@@ -185,32 +188,32 @@ public:
     double gain;
 
     switch (time_) {
-    case 0:
-      BOOST_TEST_MESSAGE(" ----- Test Velocity -----");
-      s.setZero();
-      sd.setZero();
-      vd.setZero();
-      gain = 0.0;
-      break;
-    case 1:
-      BOOST_TEST_MESSAGE(" ----- Test Position -----");
-      s.setZero();
-      sd.setConstant(2.);
-      vd.setZero();
-      gain = 1.0;
-      break;
-    case 2:
-      BOOST_TEST_MESSAGE(" ----- Test both -----");
-      s.setZero();
-      sd.setConstant(2.);
-      vd.setConstant(1.);
-      gain = 3.0;
-      break;
-    default:
-      s.setRandom();
-      sd.setRandom();
-      vd.setRandom();
-      gain = 1.0;
+      case 0:
+        BOOST_TEST_MESSAGE(" ----- Test Velocity -----");
+        s.setZero();
+        sd.setZero();
+        vd.setZero();
+        gain = 0.0;
+        break;
+      case 1:
+        BOOST_TEST_MESSAGE(" ----- Test Position -----");
+        s.setZero();
+        sd.setConstant(2.);
+        vd.setZero();
+        gain = 1.0;
+        break;
+      case 2:
+        BOOST_TEST_MESSAGE(" ----- Test both -----");
+        s.setZero();
+        sd.setConstant(2.);
+        vd.setConstant(1.);
+        gain = 3.0;
+        break;
+      default:
+        s.setRandom();
+        sd.setRandom();
+        vd.setRandom();
+        gain = 1.0;
     }
 
     feature_.errorSIN = s;
@@ -275,11 +278,10 @@ BOOST_AUTO_TEST_CASE(check_value) {
 
   TestFeatureGeneric testFeatureGeneric(dim, srobot);
 
-  for (int i = 0; i < 10; ++i)
-    testFeatureGeneric.checkValue();
+  for (int i = 0; i < 10; ++i) testFeatureGeneric.checkValue();
 }
 
-BOOST_AUTO_TEST_SUITE_END() // feature_generic
+BOOST_AUTO_TEST_SUITE_END()  // feature_generic
 
 MatrixHomogeneous randomM() {
   MatrixHomogeneous M;
@@ -300,14 +302,13 @@ Vector7 toVector(const pinocchio::SE3 &M) {
 
 Vector toVector(const std::vector<MultiBound> &in) {
   Vector out(in.size());
-  for (int i = 0; i < (int)in.size(); ++i)
-    out[i] = in[i].getSingleBound();
+  for (int i = 0; i < (int)in.size(); ++i) out[i] = in[i].getSingleBound();
   return out;
 }
 
 template <Representation_t representation>
 class TestFeaturePose : public FeatureTestBase {
-public:
+ public:
   typedef typename dg::sot::internal::LG_t<representation>::type LieGroup_t;
   FeaturePose<representation> feature_;
   bool relative_;
@@ -317,9 +318,11 @@ public:
   pinocchio::FrameIndex fa_, fb_;
 
   TestFeaturePose(bool relative, const std::string &name)
-      : FeatureTestBase(6, name), feature_("feature" + name),
-        relative_(relative), data_(model_) {
-    pinocchio::buildModels::humanoid(model_, true); // use freeflyer
+      : FeatureTestBase(6, name),
+        feature_("feature" + name),
+        relative_(relative),
+        data_(model_) {
+    pinocchio::buildModels::humanoid(model_, true);  // use freeflyer
     model_.lowerPositionLimit.head<3>().setConstant(-1.);
     model_.upperPositionLimit.head<3>().setConstant(1.);
     jb_ = model_.getJointId("rarm_wrist2_joint");
@@ -399,8 +402,7 @@ public:
     double gain = 0;
     // if (time_ % 5 != 0)
     // gain = 2 * (double)rand() / RAND_MAX;
-    if (time_ % 2 != 0)
-      gain = 1;
+    if (time_ % 2 != 0) gain = 1;
     setGain(gain);
   }
 
@@ -600,12 +602,9 @@ template <typename TestClass>
 void runTest(TestClass &runner, int N = 2)
 // int N = 10)
 {
-  for (int i = 0; i < N; ++i)
-    runner.checkValue();
-  for (int i = 0; i < N; ++i)
-    runner.checkJacobian();
-  for (int i = 0; i < N; ++i)
-    runner.checkFeedForward();
+  for (int i = 0; i < N; ++i) runner.checkValue();
+  for (int i = 0; i < N; ++i) runner.checkJacobian();
+  for (int i = 0; i < N; ++i) runner.checkFeedForward();
 }
 
 BOOST_AUTO_TEST_SUITE(feature_pose)
@@ -631,7 +630,7 @@ BOOST_AUTO_TEST_CASE(se3) {
   feature_pose_absolute_tpl<SE3Representation>("SE3");
 }
 
-BOOST_AUTO_TEST_SUITE_END() // absolute
+BOOST_AUTO_TEST_SUITE_END()  // absolute
 
 template <Representation_t representation>
 void feature_pose_relative_tpl(const std::string &repr) {
@@ -653,6 +652,6 @@ BOOST_AUTO_TEST_CASE(se3) {
   feature_pose_relative_tpl<SE3Representation>("SE3");
 }
 
-BOOST_AUTO_TEST_SUITE_END() // relative
+BOOST_AUTO_TEST_SUITE_END()  // relative
 
-BOOST_AUTO_TEST_SUITE_END() // feature_pose
+BOOST_AUTO_TEST_SUITE_END()  // feature_pose
diff --git a/tests/features/test_feature_point6d.cpp b/tests/features/test_feature_point6d.cpp
index 3e66c60b..b5f6abe3 100644
--- a/tests/features/test_feature_point6d.cpp
+++ b/tests/features/test_feature_point6d.cpp
@@ -10,9 +10,9 @@
 /* -------------------------------------------------------------------------- */
 /* --- INCLUDES ------------------------------------------------------------- */
 /* -------------------------------------------------------------------------- */
-#include <iostream>
-
 #include <dynamic-graph/linear-algebra.h>
+
+#include <iostream>
 #include <sot/core/debug.hh>
 #include <sot/core/feature-abstract.hh>
 #include <sot/core/feature-point6d.hh>
@@ -24,7 +24,7 @@ using namespace std;
 using namespace dynamicgraph::sot;
 
 class TestPoint6d {
-public:
+ public:
   SOT_CORE_DISABLE_WARNING_PUSH
   SOT_CORE_DISABLE_WARNING_DEPRECATED
   FeaturePoint6d feature_, featureDes_;
@@ -35,8 +35,10 @@ public:
   dynamicgraph::Vector manual_;
 
   TestPoint6d(unsigned dim, std::string &name)
-      : feature_("feature" + name), featureDes_("featureDes" + name),
-        task_("task" + name), time_(0)
+      : feature_("feature" + name),
+        featureDes_("featureDes" + name),
+        task_("task" + name),
+        time_(0)
 
   {
     feature_.computationFrame("desired");
@@ -87,7 +89,6 @@ public:
   }
 
   int recompute() {
-
     feature_.errorSOUT.recompute(time_);
     feature_.errordotSOUT.recompute(time_);
     task_.taskSOUT.recompute(time_);
@@ -117,16 +118,14 @@ public:
     aM(2, 0) = -vd(4);
     aM(2, 1) = vd(3);
     aM(2, 2) = 0.0;
-    for (unsigned int i = 0; i < 3; i++)
-      aV(i) = sd(i, 3) - s(i, 3);
+    for (unsigned int i = 0; i < 3; i++) aV(i) = sd(i, 3) - s(i, 3);
 
     aV = aM * aV;
 
     /// Recompute error_th.
     for (unsigned int i = 0; i < 3; i++) {
       manual_[i] = -gain * (s(i, 3) - sd(i, 3)) - (aV(i) - vd(i));
-      if (manual_[i] != taskTaskSOUT[i].getSingleBound())
-        return -1;
+      if (manual_[i] != taskTaskSOUT[i].getSingleBound()) return -1;
     }
     return 0;
   }
diff --git a/tests/filters/test_filter_differentiator.cpp b/tests/filters/test_filter_differentiator.cpp
index e658800f..fcbf30da 100644
--- a/tests/filters/test_filter_differentiator.cpp
+++ b/tests/filters/test_filter_differentiator.cpp
@@ -17,6 +17,7 @@ using namespace std;
 
 #include <dynamic-graph/entity.h>
 #include <dynamic-graph/factory.h>
+
 #include <sot/core/filter-differentiator.hh>
 #include <sstream>
 
@@ -58,8 +59,7 @@ BOOST_AUTO_TEST_CASE(test_filter_differentiator) {
 
   srand(0);
   dynamicgraph::Vector aVec(16);
-  for (unsigned int i = 0; i < 16; i++)
-    aVec(i) = (double)(i + rand() % 100);
+  for (unsigned int i = 0; i < 16; i++) aVec(i) = (double)(i + rand() % 100);
   aFilterDiff->m_xSIN = aVec;
   aFilterDiff->m_x_filteredSOUT.recompute(0);
   output_test_stream output;
@@ -67,20 +67,21 @@ BOOST_AUTO_TEST_CASE(test_filter_differentiator) {
   dynamicgraph::Vector outVec;
   aFilterDiff->m_x_filteredSOUT.get(output);
 
-  BOOST_CHECK(output.is_equal("82.5614 "
-                              "86.5403 "
-                              "78.5826 "
-                              "17.9049 "
-                              "96.4874 "
-                              "39.7886 "
-                              "91.5139 "
-                              "98.4769 "
-                              "56.6988 "
-                              "29.8415 "
-                              "71.6195 "
-                              "37.7992 "
-                              "101.461 "
-                              "71.6195 "
-                              "76.5931 "
-                              "40.7834"));
+  BOOST_CHECK(
+      output.is_equal("82.5614 "
+                      "86.5403 "
+                      "78.5826 "
+                      "17.9049 "
+                      "96.4874 "
+                      "39.7886 "
+                      "91.5139 "
+                      "98.4769 "
+                      "56.6988 "
+                      "29.8415 "
+                      "71.6195 "
+                      "37.7992 "
+                      "101.461 "
+                      "71.6195 "
+                      "76.5931 "
+                      "40.7834"));
 }
diff --git a/tests/filters/test_madgwick_ahrs.cpp b/tests/filters/test_madgwick_ahrs.cpp
index 82272398..d4eeeac6 100644
--- a/tests/filters/test_madgwick_ahrs.cpp
+++ b/tests/filters/test_madgwick_ahrs.cpp
@@ -17,6 +17,7 @@ using namespace std;
 
 #include <dynamic-graph/entity.h>
 #include <dynamic-graph/factory.h>
+
 #include <sot/core/madgwickahrs.hh>
 #include <sstream>
 
@@ -54,8 +55,9 @@ BOOST_AUTO_TEST_CASE(test_filter_differentiator) {
   aFilter->m_imu_quatSOUT.get(output);
   aFilter->m_imu_quatSOUT.get(anoss);
 
-  BOOST_CHECK(output.is_equal("1 "
-                              "5.5547e-05 "
-                              "-5.83205e-05 "
-                              "0.00015"));
+  BOOST_CHECK(
+      output.is_equal("1 "
+                      "5.5547e-05 "
+                      "-5.83205e-05 "
+                      "0.00015"));
 }
diff --git a/tests/filters/test_madgwick_arhs.cpp b/tests/filters/test_madgwick_arhs.cpp
index 5c8ffdf3..e3ea72ce 100644
--- a/tests/filters/test_madgwick_arhs.cpp
+++ b/tests/filters/test_madgwick_arhs.cpp
@@ -17,6 +17,7 @@ using namespace std;
 
 #include <dynamic-graph/entity.h>
 #include <dynamic-graph/factory.h>
+
 #include <sot/core/madgwickahrs.hh>
 #include <sstream>
 
@@ -54,20 +55,21 @@ BOOST_AUTO_TEST_CASE(test_filter_differentiator) {
   aFilter->m_imu_quatSOUT.get(output);
   aFilter->m_imu_quatSOUT.get(anoss);
   std::cout << "anoss:" << anoss << std::endl;
-  BOOST_CHECK(output.is_equal("82.5614\n"
-                              "86.5403\n"
-                              "78.5826\n"
-                              "17.9049\n"
-                              "96.4874\n"
-                              "39.7886\n"
-                              "91.5139\n"
-                              "98.4769\n"
-                              "56.6988\n"
-                              "29.8415\n"
-                              "71.6195\n"
-                              "37.7992\n"
-                              "101.461\n"
-                              "71.6195\n"
-                              "76.5931\n"
-                              "40.7834\n"));
+  BOOST_CHECK(
+      output.is_equal("82.5614\n"
+                      "86.5403\n"
+                      "78.5826\n"
+                      "17.9049\n"
+                      "96.4874\n"
+                      "39.7886\n"
+                      "91.5139\n"
+                      "98.4769\n"
+                      "56.6988\n"
+                      "29.8415\n"
+                      "71.6195\n"
+                      "37.7992\n"
+                      "101.461\n"
+                      "71.6195\n"
+                      "76.5931\n"
+                      "40.7834\n"));
 }
diff --git a/tests/math/matrix-homogeneous.cpp b/tests/math/matrix-homogeneous.cpp
index 08e4b99e..0637a1e9 100644
--- a/tests/math/matrix-homogeneous.cpp
+++ b/tests/math/matrix-homogeneous.cpp
@@ -15,38 +15,38 @@ using boost::test_tools::output_test_stream;
 
 namespace dg = dynamicgraph;
 
-#define MATRIX_BOOST_REQUIRE_CLOSE(N, M, LEFT, RIGHT, TOLERANCE)               \
-  for (unsigned i = 0; i < N; ++i)                                             \
-    for (unsigned j = 0; j < M; ++j)                                           \
+#define MATRIX_BOOST_REQUIRE_CLOSE(N, M, LEFT, RIGHT, TOLERANCE) \
+  for (unsigned i = 0; i < N; ++i)                               \
+    for (unsigned j = 0; j < M; ++j)                             \
   BOOST_REQUIRE_CLOSE(LEFT(i, j), RIGHT(i, j), TOLERANCE)
 
-#define MATRIX_4x4_BOOST_REQUIRE_CLOSE(LEFT, RIGHT, TOLERANCE)                 \
+#define MATRIX_4x4_BOOST_REQUIRE_CLOSE(LEFT, RIGHT, TOLERANCE) \
   MATRIX_BOOST_REQUIRE_CLOSE(4, 4, LEFT, RIGHT, TOLERANCE)
 
-#define MATRIX_IDENTITY_4x4_REQUIRE_CLOSE(M, TOLERANCE)                        \
-  for (unsigned i = 0; i < 4; ++i)                                             \
-    for (unsigned j = 0; j < 4; ++j)                                           \
-      if (i == j)                                                              \
-        BOOST_REQUIRE_CLOSE(M(i, j), 1., TOLERANCE);                           \
-      else                                                                     \
+#define MATRIX_IDENTITY_4x4_REQUIRE_CLOSE(M, TOLERANCE) \
+  for (unsigned i = 0; i < 4; ++i)                      \
+    for (unsigned j = 0; j < 4; ++j)                    \
+      if (i == j)                                       \
+        BOOST_REQUIRE_CLOSE(M(i, j), 1., TOLERANCE);    \
+      else                                              \
         BOOST_CHECK_SMALL(M(i, j), .01 * TOLERANCE)
 
-#define MATRIX_HOMO_INIT(M, tx, ty, tz, roll, pitch, yaw)                      \
-  M(0, 0) = cos(pitch) * cos(yaw);                                             \
-  M(0, 1) = sin(roll) * sin(pitch) * cos(yaw) - cos(roll) * sin(yaw);          \
-  M(0, 2) = cos(roll) * sin(pitch) * cos(yaw) + sin(roll) * sin(yaw);          \
-  M(0, 3) = tx;                                                                \
-  M(1, 0) = cos(pitch) * sin(yaw);                                             \
-  M(1, 1) = sin(roll) * sin(pitch) * sin(yaw) + cos(roll) * cos(yaw);          \
-  M(1, 2) = cos(roll) * sin(pitch) * sin(yaw) - sin(roll) * cos(yaw);          \
-  M(1, 3) = ty;                                                                \
-  M(2, 0) = -sin(pitch);                                                       \
-  M(2, 1) = sin(roll) * cos(pitch);                                            \
-  M(2, 2) = cos(roll) * cos(pitch);                                            \
-  M(2, 3) = tz;                                                                \
-  M(3, 0) = 0.;                                                                \
-  M(3, 1) = 0.;                                                                \
-  M(3, 2) = 0.;                                                                \
+#define MATRIX_HOMO_INIT(M, tx, ty, tz, roll, pitch, yaw)             \
+  M(0, 0) = cos(pitch) * cos(yaw);                                    \
+  M(0, 1) = sin(roll) * sin(pitch) * cos(yaw) - cos(roll) * sin(yaw); \
+  M(0, 2) = cos(roll) * sin(pitch) * cos(yaw) + sin(roll) * sin(yaw); \
+  M(0, 3) = tx;                                                       \
+  M(1, 0) = cos(pitch) * sin(yaw);                                    \
+  M(1, 1) = sin(roll) * sin(pitch) * sin(yaw) + cos(roll) * cos(yaw); \
+  M(1, 2) = cos(roll) * sin(pitch) * sin(yaw) - sin(roll) * cos(yaw); \
+  M(1, 3) = ty;                                                       \
+  M(2, 0) = -sin(pitch);                                              \
+  M(2, 1) = sin(roll) * cos(pitch);                                   \
+  M(2, 2) = cos(roll) * cos(pitch);                                   \
+  M(2, 3) = tz;                                                       \
+  M(3, 0) = 0.;                                                       \
+  M(3, 1) = 0.;                                                       \
+  M(3, 2) = 0.;                                                       \
   M(3, 3) = 1.
 
 BOOST_AUTO_TEST_CASE(product) {
diff --git a/tests/math/matrix-twist.cpp b/tests/math/matrix-twist.cpp
index 436e9de3..af0a9fce 100644
--- a/tests/math/matrix-twist.cpp
+++ b/tests/math/matrix-twist.cpp
@@ -7,24 +7,23 @@
 #include <boost/test/floating_point_comparison.hpp>
 #include <boost/test/output_test_stream.hpp>
 #include <boost/test/unit_test.hpp>
-
 #include <sot/core/matrix-geometry.hh>
 
 using boost::test_tools::output_test_stream;
 
-#define MATRIX_BOOST_REQUIRE_CLOSE(N, M, LEFT, RIGHT, TOLERANCE)               \
-  for (unsigned i = 0; i < N; ++i)                                             \
-    for (unsigned j = 0; j < M; ++j)                                           \
+#define MATRIX_BOOST_REQUIRE_CLOSE(N, M, LEFT, RIGHT, TOLERANCE) \
+  for (unsigned i = 0; i < N; ++i)                               \
+    for (unsigned j = 0; j < M; ++j)                             \
   BOOST_REQUIRE_CLOSE(LEFT(i, j), RIGHT(i, j), TOLERANCE)
 
-#define MATRIX_6x6_BOOST_REQUIRE_CLOSE(LEFT, RIGHT, TOLERANCE)                 \
+#define MATRIX_6x6_BOOST_REQUIRE_CLOSE(LEFT, RIGHT, TOLERANCE) \
   MATRIX_BOOST_REQUIRE_CLOSE(6, 6, LEFT, RIGHT, TOLERANCE)
 
-#define MATRIX_4x4_INIT(M, A00, A01, A02, A03, A10, A11, A12, A13, A20, A21,   \
-                        A22, A23, A30, A31, A32, A33)                          \
-  M(0, 0) = A00, M(0, 1) = A01, M(0, 2) = A02, M(0, 3) = A03;                  \
-  M(1, 0) = A10, M(1, 1) = A11, M(1, 2) = A12, M(1, 3) = A13;                  \
-  M(2, 0) = A20, M(2, 1) = A21, M(2, 2) = A22, M(2, 3) = A23;                  \
+#define MATRIX_4x4_INIT(M, A00, A01, A02, A03, A10, A11, A12, A13, A20, A21, \
+                        A22, A23, A30, A31, A32, A33)                        \
+  M(0, 0) = A00, M(0, 1) = A01, M(0, 2) = A02, M(0, 3) = A03;                \
+  M(1, 0) = A10, M(1, 1) = A11, M(1, 2) = A12, M(1, 3) = A13;                \
+  M(2, 0) = A20, M(2, 1) = A21, M(2, 2) = A22, M(2, 3) = A23;                \
   M(3, 0) = A30, M(3, 1) = A31, M(3, 2) = A32, M(3, 3) = A33
 
 #define MATRIX_6x6_INIT(M, A00, A01, A02, A03, A04, A05, A10, A11, A12, A13,   \
@@ -67,8 +66,7 @@ BOOST_AUTO_TEST_CASE(constructor_trivial_identity) {
   dynamicgraph::Matrix twistRef(6, 6);
 
   for (unsigned i = 0; i < 6; ++i)
-    for (unsigned j = 0; j < 6; ++j)
-      twistRef(i, j) = (i == j) ? 1. : 0.;
+    for (unsigned j = 0; j < 6; ++j) twistRef(i, j) = (i == j) ? 1. : 0.;
 
   MATRIX_6x6_BOOST_REQUIRE_CLOSE(twist, twistRef, 0.001);
 }
diff --git a/tests/matrix/test_operator.cpp b/tests/matrix/test_operator.cpp
index eaa9d6f4..49201a86 100644
--- a/tests/matrix/test_operator.cpp
+++ b/tests/matrix/test_operator.cpp
@@ -1,8 +1,9 @@
 /// Copyright CNRS 2019
 /// author: O. Stasse
-#include "../../src/matrix/operator.cpp"
 #include <iostream>
 
+#include "../../src/matrix/operator.cpp"
+
 namespace dg = ::dynamicgraph;
 using namespace dynamicgraph::sot;
 
@@ -26,12 +27,12 @@ BOOST_AUTO_TEST_CASE(test_vector_selecter) {
   BOOST_CHECK(output.is_equal("Vector"));
 
   output << aSelec_of_vector.getDocString();
-  BOOST_CHECK(output.is_equal("Undocumented unary operator\n"
-                              "  - input  Vector\n"
-                              "  - output Vector\n"));
+  BOOST_CHECK(
+      output.is_equal("Undocumented unary operator\n"
+                      "  - input  Vector\n"
+                      "  - output Vector\n"));
   dg::Vector vIn(10), vOut(10);
-  for (unsigned int i = 0; i < 10; i++)
-    vIn(i) = i;
+  for (unsigned int i = 0; i < 10; i++) vIn(i) = i;
 
   aSelec_of_vector.setBounds(3, 5);
   aSelec_of_vector.addBounds(7, 10);
@@ -56,9 +57,10 @@ BOOST_AUTO_TEST_CASE(test_vector_selecter) {
   BOOST_CHECK(output.is_equal("Selec_of_vector"));
 
   output << aVectorSelecter->getDocString();
-  BOOST_CHECK(output.is_equal("Undocumented unary operator\n"
-                              "  - input  Vector\n"
-                              "  - output Vector\n"));
+  BOOST_CHECK(
+      output.is_equal("Undocumented unary operator\n"
+                      "  - input  Vector\n"
+                      "  - output Vector\n"));
 }
 
 BOOST_AUTO_TEST_CASE(test_vector_component) {
@@ -69,17 +71,17 @@ BOOST_AUTO_TEST_CASE(test_vector_component) {
 
   aComponent_of_vector.setIndex(1);
   dg::Vector vIn(3);
-  for (unsigned int i = 0; i < 3; i++)
-    vIn(i) = i;
+  for (unsigned int i = 0; i < 3; i++) vIn(i) = i;
 
   double res;
   aComponent_of_vector(vIn, res);
   BOOST_CHECK(res == 1.0);
 
   output << aComponent_of_vector.getDocString();
-  BOOST_CHECK(output.is_equal("Select a component of a vector\n"
-                              "  - input  vector\n"
-                              "  - output double"));
+  BOOST_CHECK(
+      output.is_equal("Select a component of a vector\n"
+                      "  - input  vector\n"
+                      "  - output double"));
 
   output << aComponent_of_vector.nameTypeIn();
   BOOST_CHECK(output.is_equal("Vector"));
@@ -100,9 +102,10 @@ BOOST_AUTO_TEST_CASE(test_vector_component) {
   BOOST_CHECK(output.is_equal("Component_of_vector"));
 
   output << aVectorSelecter->getDocString();
-  BOOST_CHECK(output.is_equal("Select a component of a vector\n"
-                              "  - input  vector\n"
-                              "  - output double"));
+  BOOST_CHECK(
+      output.is_equal("Select a component of a vector\n"
+                      "  - input  vector\n"
+                      "  - output double"));
 }
 
 BOOST_AUTO_TEST_CASE(test_matrix_selector) {
@@ -114,8 +117,7 @@ BOOST_AUTO_TEST_CASE(test_matrix_selector) {
 
   dg::Matrix aMatrix(5, 5);
   for (unsigned int i = 0; i < 5; i++)
-    for (unsigned int j = 0; j < 5; j++)
-      aMatrix(i, j) = i * 5 + j;
+    for (unsigned int j = 0; j < 5; j++) aMatrix(i, j) = i * 5 + j;
 
   dg::Matrix resMatrix(2, 2);
   aSelec_of_matrix(aMatrix, resMatrix);
@@ -144,24 +146,30 @@ BOOST_AUTO_TEST_CASE(test_matrix_selector) {
 
 BOOST_AUTO_TEST_SUITE(test_rotation_conversions)
 
-template <typename type> type random();
-template <> VectorRollPitchYaw random<VectorRollPitchYaw>() {
+template <typename type>
+type random();
+template <>
+VectorRollPitchYaw random<VectorRollPitchYaw>() {
   return VectorRollPitchYaw::Random();
 }
-template <> VectorQuaternion random<VectorQuaternion>() {
+template <>
+VectorQuaternion random<VectorQuaternion>() {
   return VectorQuaternion(Eigen::Vector4d::Random().normalized());
 }
-template <> MatrixRotation random<MatrixRotation>() {
+template <>
+MatrixRotation random<MatrixRotation>() {
   return MatrixRotation(random<VectorQuaternion>());
 }
-template <> MatrixHomogeneous random<MatrixHomogeneous>() {
+template <>
+MatrixHomogeneous random<MatrixHomogeneous>() {
   MatrixHomogeneous matrix_homo;
   matrix_homo.translation() = Eigen::Vector3d::Random();
   matrix_homo.linear() = random<MatrixRotation>();
   return matrix_homo;
 }
 
-template <typename type> bool compare(const type &a, const type &b) {
+template <typename type>
+bool compare(const type &a, const type &b) {
   return a.isApprox(b);
 }
 template <>
@@ -170,7 +178,8 @@ bool compare<VectorQuaternion>(const VectorQuaternion &a,
   return a.isApprox(b) || a.coeffs().isApprox(-b.coeffs());
 }
 
-template <typename AtoB, typename BtoA> void test_impl() {
+template <typename AtoB, typename BtoA>
+void test_impl() {
   typedef typename AtoB::Tin A;
   typedef typename AtoB::Tout B;
 
diff --git a/tests/python/parameter_server_conf.py b/tests/python/parameter_server_conf.py
index d299e0fd..a6b70815 100644
--- a/tests/python/parameter_server_conf.py
+++ b/tests/python/parameter_server_conf.py
@@ -1,13 +1,15 @@
 NJ = 2
-model_path = ['/integration_tests/openrobots/share/']
-urdfFileName = "/integration_tests/openrobots/share/" + \
-    "simple_humanoid_description/urdf/" + \
-    "simple_humanoid.urdf"
+model_path = ["/integration_tests/openrobots/share/"]
+urdfFileName = (
+    "/integration_tests/openrobots/share/"
+    + "simple_humanoid_description/urdf/"
+    + "simple_humanoid.urdf"
+)
 ImuJointName = "imu_joint"
 
 mapJointNameToID = {
-    'j1': 0,
-    'j2': 1,
+    "j1": 0,
+    "j2": 1,
 }
 
 mapJointLimits = {
diff --git a/tests/python/test-imports.py b/tests/python/test-imports.py
index bfd25440..d7eb0eb2 100755
--- a/tests/python/test-imports.py
+++ b/tests/python/test-imports.py
@@ -95,5 +95,5 @@ class PythonImportTest(unittest.TestCase):
             self.fail(str(ie))
 
 
-if __name__ == '__main__':
+if __name__ == "__main__":
     unittest.main()
diff --git a/tests/python/test-initialize-euler.py b/tests/python/test-initialize-euler.py
index 3a8e1576..6f91d0f9 100755
--- a/tests/python/test-initialize-euler.py
+++ b/tests/python/test-initialize-euler.py
@@ -10,8 +10,10 @@ class OpPointModifierTest(unittest.TestCase):
         ent = ie.IntegratorEulerVectorDouble("ie")
         with self.assertRaises(RuntimeError) as cm:
             ent.initialize()
-        self.assertEqual(str(cm.exception), 'The numerator or the denominator is empty.')
+        self.assertEqual(
+            str(cm.exception), "The numerator or the denominator is empty."
+        )
 
 
-if __name__ == '__main__':
+if __name__ == "__main__":
     unittest.main()
diff --git a/tests/python/test-matrix-util.py b/tests/python/test-matrix-util.py
index 40ebdf4c..32110484 100644
--- a/tests/python/test-matrix-util.py
+++ b/tests/python/test-matrix-util.py
@@ -40,9 +40,21 @@ class MatrixUtilTest(unittest.TestCase):
 
         def test_rotate(self):
             for axis, angle, mat in [
-                ('x', np.pi, ((1, 0, 0, 0), (0, -1, 0, 0), (0, 0, -1, 0), (0, 0, 0, 1))),
-                ('y', np.pi, ((-1, 0, 0, 0), (0, 1, 0, 0), (0, 0, -1, 0), (0, 0, 0, 1))),
-                ('z', np.pi, ((-1, 0, 0, 0), (0, -1, 0, 0), (0, 0, 1, 0), (0, 0, 0, 1))),
+                (
+                    "x",
+                    np.pi,
+                    ((1, 0, 0, 0), (0, -1, 0, 0), (0, 0, -1, 0), (0, 0, 0, 1)),
+                ),
+                (
+                    "y",
+                    np.pi,
+                    ((-1, 0, 0, 0), (0, 1, 0, 0), (0, 0, -1, 0), (0, 0, 0, 1)),
+                ),
+                (
+                    "z",
+                    np.pi,
+                    ((-1, 0, 0, 0), (0, -1, 0, 0), (0, 0, 1, 0), (0, 0, 0, 1)),
+                ),
             ]:
                 self.assertEqual(mat, mod.rotate(axis, angle))
 
@@ -55,5 +67,5 @@ class MatrixUtilTest(unittest.TestCase):
                 self.assertEqual(mat, mod.quaternionToMatrix(quat))
 
 
-if __name__ == '__main__':
+if __name__ == "__main__":
     unittest.main()
diff --git a/tests/python/test-op-point-modifier.py b/tests/python/test-op-point-modifier.py
index ce0a41bd..640815ac 100755
--- a/tests/python/test-op-point-modifier.py
+++ b/tests/python/test-op-point-modifier.py
@@ -7,21 +7,54 @@ import unittest
 import numpy as np
 from dynamic_graph.sot.core.op_point_modifier import OpPointModifier
 
-gaze = np.array((((1.0, 0.0, 0.0, 0.025), (0.0, 1.0, 0.0, 0.0), (0.0, 0.0, 1.0, 0.648), (0.0, 0.0, 0.0, 1.0))))
+gaze = np.array(
+    (
+        (
+            (1.0, 0.0, 0.0, 0.025),
+            (0.0, 1.0, 0.0, 0.0),
+            (0.0, 0.0, 1.0, 0.648),
+            (0.0, 0.0, 0.0, 1.0),
+        )
+    )
+)
 
 Jgaze = np.array(
-    (((1.0, 0.0, 0.0, 0.0, 0.648, 0.0), (0.0, 1.0, 0.0, -0.648, 0.0, 0.025), (0.0, 0.0, 1.0, 0.0, -0.025, 0.0),
-      (0.0, 0.0, 0.0, 1.0, 0.0, 0.0), (0.0, 0.0, 0.0, 0.0, 1.0, 0.0), (0.0, 0.0, 0.0, 0.0, 0.0, 1.0))))
-
-I4 = np.array(((1., 0., 0., 0.), (0., 1., 0., 0.), (0., 0., 1., 0.), (0., 0., 0., 1.)))
-
-I6 = np.array(((1., 0., 0., 0., 0., 0.), (0., 1., 0., 0., 0., 0.), (0., 0., 1., 0., 0., 0.), (0., 0., 0., 1., 0., 0.),
-               (0., 0., 0., 0., 1., 0.), (0., 0., 0., 0., 0., 1.)))
+    (
+        (
+            (1.0, 0.0, 0.0, 0.0, 0.648, 0.0),
+            (0.0, 1.0, 0.0, -0.648, 0.0, 0.025),
+            (0.0, 0.0, 1.0, 0.0, -0.025, 0.0),
+            (0.0, 0.0, 0.0, 1.0, 0.0, 0.0),
+            (0.0, 0.0, 0.0, 0.0, 1.0, 0.0),
+            (0.0, 0.0, 0.0, 0.0, 0.0, 1.0),
+        )
+    )
+)
+
+I4 = np.array(
+    (
+        (1.0, 0.0, 0.0, 0.0),
+        (0.0, 1.0, 0.0, 0.0),
+        (0.0, 0.0, 1.0, 0.0),
+        (0.0, 0.0, 0.0, 1.0),
+    )
+)
+
+I6 = np.array(
+    (
+        (1.0, 0.0, 0.0, 0.0, 0.0, 0.0),
+        (0.0, 1.0, 0.0, 0.0, 0.0, 0.0),
+        (0.0, 0.0, 1.0, 0.0, 0.0, 0.0),
+        (0.0, 0.0, 0.0, 1.0, 0.0, 0.0),
+        (0.0, 0.0, 0.0, 0.0, 1.0, 0.0),
+        (0.0, 0.0, 0.0, 0.0, 0.0, 1.0),
+    )
+)
 
 
 class OpPointModifierTest(unittest.TestCase):
     def test_simple(self):
-        op = OpPointModifier('op')
+        op = OpPointModifier("op")
         op.setTransformation(I4)
         op.positionIN.value = I4
         op.jacobianIN.value = I6
@@ -33,13 +66,20 @@ class OpPointModifierTest(unittest.TestCase):
         self.assertTrue((op.jacobian.value == I6).all())
 
     def test_translation(self):
-        tx = 11.
-        ty = 22.
-        tz = 33.
-
-        T = np.array(((1., 0., 0., tx), (0., 1., 0., ty), (0., 0., 1., tz), (0., 0., 0., 1.)))
-
-        op = OpPointModifier('op2')
+        tx = 11.0
+        ty = 22.0
+        tz = 33.0
+
+        T = np.array(
+            (
+                (1.0, 0.0, 0.0, tx),
+                (0.0, 1.0, 0.0, ty),
+                (0.0, 0.0, 1.0, tz),
+                (0.0, 0.0, 0.0, 1.0),
+            )
+        )
+
+        op = OpPointModifier("op2")
         op.setTransformation(T)
         op.positionIN.value = gaze
         op.jacobianIN.value = Jgaze
@@ -57,8 +97,16 @@ class OpPointModifierTest(unittest.TestCase):
         # Check w_M_s == w_M_s_ref
         self.assertTrue((w_M_s == w_M_s_ref).all())
 
-        twist = np.array([[1., 0., 0., 0., tz, -ty], [0., 1., 0., -tz, 0., tx], [0., 0., 1., ty, -tx, 0.],
-                          [0., 0., 0., 1., 0., 0.], [0., 0., 0., 0., 1., 0.], [0., 0., 0., 0., 0., 1.]])
+        twist = np.array(
+            [
+                [1.0, 0.0, 0.0, 0.0, tz, -ty],
+                [0.0, 1.0, 0.0, -tz, 0.0, tx],
+                [0.0, 0.0, 1.0, ty, -tx, 0.0],
+                [0.0, 0.0, 0.0, 1.0, 0.0, 0.0],
+                [0.0, 0.0, 0.0, 0.0, 1.0, 0.0],
+                [0.0, 0.0, 0.0, 0.0, 0.0, 1.0],
+            ]
+        )
 
         J = op.jacobian.value
         J_ref = twist.dot(Jgaze)
@@ -67,9 +115,16 @@ class OpPointModifierTest(unittest.TestCase):
         self.assertTrue((J == J_ref).all())
 
     def test_rotation(self):
-        T = np.array(((0., 0., 1., 0.), (0., -1., 0., 0.), (1., 0., 0., 0.), (0., 0., 0., 1.)))
-
-        op = OpPointModifier('op3')
+        T = np.array(
+            (
+                (0.0, 0.0, 1.0, 0.0),
+                (0.0, -1.0, 0.0, 0.0),
+                (1.0, 0.0, 0.0, 0.0),
+                (0.0, 0.0, 0.0, 1.0),
+            )
+        )
+
+        op = OpPointModifier("op3")
         op.setTransformation(T)
         op.positionIN.value = gaze
         op.jacobianIN.value = Jgaze
@@ -87,8 +142,16 @@ class OpPointModifierTest(unittest.TestCase):
         # Check w_M_s == w_M_s_ref
         self.assertTrue((w_M_s == w_M_s_ref).all())
 
-        twist = np.array([[0., 0., 1., 0., 0., 0.], [0., -1., 0., 0., 0., 0.], [1., 0., 0., 0., 0., 0.],
-                          [0., 0., 0., 0., 0., 1.], [0., 0., 0., 0., -1., 0.], [0., 0., 0., 1., 0., 0.]])
+        twist = np.array(
+            [
+                [0.0, 0.0, 1.0, 0.0, 0.0, 0.0],
+                [0.0, -1.0, 0.0, 0.0, 0.0, 0.0],
+                [1.0, 0.0, 0.0, 0.0, 0.0, 0.0],
+                [0.0, 0.0, 0.0, 0.0, 0.0, 1.0],
+                [0.0, 0.0, 0.0, 0.0, -1.0, 0.0],
+                [0.0, 0.0, 0.0, 1.0, 0.0, 0.0],
+            ]
+        )
 
         J = op.jacobian.value
         J_ref = twist.dot(Jgaze)
@@ -97,13 +160,20 @@ class OpPointModifierTest(unittest.TestCase):
         self.assertTrue((J == J_ref).all())
 
     def test_rotation_translation(self):
-        tx = 11.
-        ty = 22.
-        tz = 33.
-
-        T = np.array(((0., 0., 1., tx), (0., -1., 0., ty), (1., 0., 0., tz), (0., 0., 0., 1.)))
-
-        op = OpPointModifier('op4')
+        tx = 11.0
+        ty = 22.0
+        tz = 33.0
+
+        T = np.array(
+            (
+                (0.0, 0.0, 1.0, tx),
+                (0.0, -1.0, 0.0, ty),
+                (1.0, 0.0, 0.0, tz),
+                (0.0, 0.0, 0.0, 1.0),
+            )
+        )
+
+        op = OpPointModifier("op4")
         op.setTransformation(T)
         op.positionIN.value = gaze
         op.jacobianIN.value = Jgaze
@@ -121,8 +191,16 @@ class OpPointModifierTest(unittest.TestCase):
         # Check w_M_s == w_M_s_ref
         self.assertTrue((w_M_s == w_M_s_ref).all())
 
-        twist = np.array([[0., 0., 1., ty, -tx, 0.], [0., -1., 0., tz, 0., -tx], [1., 0., 0., 0., tz, -ty],
-                          [0., 0., 0., 0., 0., 1.], [0., 0., 0., 0., -1., 0.], [0., 0., 0., 1., 0., 0.]])
+        twist = np.array(
+            [
+                [0.0, 0.0, 1.0, ty, -tx, 0.0],
+                [0.0, -1.0, 0.0, tz, 0.0, -tx],
+                [1.0, 0.0, 0.0, 0.0, tz, -ty],
+                [0.0, 0.0, 0.0, 0.0, 0.0, 1.0],
+                [0.0, 0.0, 0.0, 0.0, -1.0, 0.0],
+                [0.0, 0.0, 0.0, 1.0, 0.0, 0.0],
+            ]
+        )
 
         J = op.jacobian.value
         J_ref = twist.dot(Jgaze)
@@ -131,5 +209,5 @@ class OpPointModifierTest(unittest.TestCase):
         self.assertTrue((J == J_ref).all())
 
 
-if __name__ == '__main__':
+if __name__ == "__main__":
     unittest.main()
diff --git a/tests/python/test-parameter-server.py b/tests/python/test-parameter-server.py
index 695b5a21..728a2168 100644
--- a/tests/python/test-parameter-server.py
+++ b/tests/python/test-parameter-server.py
@@ -12,7 +12,7 @@ param_server.init(0.001, "talos.urdf", "talos")
 
 # Control time interval
 dt = 0.001
-robot_name = 'robot'
+robot_name = "robot"
 
 urdfPath = param_server_conf.urdfFileName
 urdfDir = param_server_conf.model_path
@@ -21,10 +21,10 @@ urdfDir = param_server_conf.model_path
 class TestParameterServer(unittest.TestCase):
     def test_set_parameter(self):
         # Read talos model
-        path = join(dirname(dirname(abspath(__file__))), 'models', 'others', 'python')
+        path = join(dirname(dirname(abspath(__file__))), "models", "others", "python")
         sys.path.append(path)
 
-        _, _, urdf_file_name, _ = load_full('talos')
+        _, _, urdf_file_name, _ = load_full("talos")
         with open(urdf_file_name) as fs:
             urdf_rrbot_model_string = fs.read()
 
@@ -39,5 +39,5 @@ class TestParameterServer(unittest.TestCase):
         self.assertEqual(aValue, a2Value)
 
 
-if __name__ == '__main__':
+if __name__ == "__main__":
     unittest.main()
diff --git a/tests/python/test-smooth-reach.py b/tests/python/test-smooth-reach.py
index f2a23eb9..29a74136 100755
--- a/tests/python/test-smooth-reach.py
+++ b/tests/python/test-smooth-reach.py
@@ -11,5 +11,5 @@ class SmoothReachTest(unittest.TestCase):
         self.assertIn("output(vector)::goal (Type Fun)", str(sr.goal))
 
 
-if __name__ == '__main__':
+if __name__ == "__main__":
     unittest.main()
diff --git a/tests/signal/test_dep.cpp b/tests/signal/test_dep.cpp
index 9d863c26..5cb1b5b7 100644
--- a/tests/signal/test_dep.cpp
+++ b/tests/signal/test_dep.cpp
@@ -12,13 +12,14 @@
 /* -------------------------------------------------------------------------- */
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/linear-algebra.h>
+
 #include <iostream>
 using namespace std;
 using namespace dynamicgraph;
 
-template <class Res = double> class DummyClass {
-
-public:
+template <class Res = double>
+class DummyClass {
+ public:
   DummyClass(void) : res(), appel(0), timedata(0) {}
 
   Res &fun(Res &res, int t) {
@@ -57,9 +58,13 @@ public:
   int timedata;
 };
 
-template <class Res> Res DummyClass<Res>::operator()(void) { return this->res; }
+template <class Res>
+Res DummyClass<Res>::operator()(void) {
+  return this->res;
+}
 
-template <> double DummyClass<double>::operator()(void) {
+template <>
+double DummyClass<double>::operator()(void) {
   res = appel * timedata;
   return res;
 }
diff --git a/tests/signal/test_depend.cpp b/tests/signal/test_depend.cpp
index 2d2bef0f..188433bd 100644
--- a/tests/signal/test_depend.cpp
+++ b/tests/signal/test_depend.cpp
@@ -12,20 +12,21 @@
 /* -------------------------------------------------------------------------- */
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/linear-algebra.h>
+
 #include <iostream>
 #include <sot/core/debug.hh>
 
 using namespace std;
 using namespace dynamicgraph;
 
-template <class Res = double> class DummyClass {
-
-public:
+template <class Res = double>
+class DummyClass {
+ public:
   std::string proname;
   list<SignalTimeDependent<double, int> *> inputsig;
   list<SignalTimeDependent<dynamicgraph::Vector, int> *> inputsigV;
 
-public:
+ public:
   DummyClass(const std::string &n) : proname(n), res(), appel(0), timedata(0) {}
 
   Res &fun(Res &res, int t) {
@@ -61,9 +62,13 @@ public:
   int timedata;
 };
 
-template <class Res> Res DummyClass<Res>::operator()(void) { return this->res; }
+template <class Res>
+Res DummyClass<Res>::operator()(void) {
+  return this->res;
+}
 
-template <> double DummyClass<double>::operator()(void) {
+template <>
+double DummyClass<double>::operator()(void) {
   res = appel * timedata;
   return res;
 }
diff --git a/tests/signal/test_ptr.cpp b/tests/signal/test_ptr.cpp
index a6a17cd7..16bb21c8 100644
--- a/tests/signal/test_ptr.cpp
+++ b/tests/signal/test_ptr.cpp
@@ -12,6 +12,7 @@
 /* -------------------------------------------------------------------------- */
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/linear-algebra.h>
+
 #include <iostream>
 #include <sot/core/debug.hh>
 #include <sot/core/exception-abstract.hh>
@@ -21,9 +22,9 @@ using namespace std;
 using namespace dynamicgraph::sot;
 using namespace dynamicgraph;
 
-template <class Res = double> class DummyClass {
-
-public:
+template <class Res = double>
+class DummyClass {
+ public:
   DummyClass(void) : res(), appel(0), timedata(0) {}
 
   Res &fun(Res &res, int t) {
@@ -62,9 +63,13 @@ public:
   int timedata;
 };
 
-template <class Res> Res DummyClass<Res>::operator()(void) { return this->res; }
+template <class Res>
+Res DummyClass<Res>::operator()(void) {
+  return this->res;
+}
 
-template <> double DummyClass<double>::operator()(void) {
+template <>
+double DummyClass<double>::operator()(void) {
   res = appel * timedata;
   return res;
 }
@@ -74,7 +79,8 @@ dynamicgraph::Vector DummyClass<dynamicgraph::Vector>::operator()(void) {
   res.fill(appel * timedata);
   return res;
 }
-template <> VectorUTheta DummyClass<VectorUTheta>::operator()(void) {
+template <>
+VectorUTheta DummyClass<VectorUTheta>::operator()(void) {
   res.angle() = 0.26;
   res.axis() = Eigen::Vector3d::UnitX();
   return res;
diff --git a/tests/signal/test_ptrcast.cpp b/tests/signal/test_ptrcast.cpp
index e64ef95c..bc6f891a 100644
--- a/tests/signal/test_ptrcast.cpp
+++ b/tests/signal/test_ptrcast.cpp
@@ -12,6 +12,7 @@
 /* -------------------------------------------------------------------------- */
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/linear-algebra.h>
+
 #include <iostream>
 #include <sot/core/matrix-geometry.hh>
 using namespace std;
diff --git a/tests/signal/test_signal.cpp b/tests/signal/test_signal.cpp
index 6a15ef2f..334ece24 100644
--- a/tests/signal/test_signal.cpp
+++ b/tests/signal/test_signal.cpp
@@ -12,13 +12,13 @@
 /* -------------------------------------------------------------------------- */
 #include <dynamic-graph/all-signals.h>
 #include <dynamic-graph/linear-algebra.h>
+
 #include <iostream>
 using namespace std;
 using namespace dynamicgraph;
 
 class DummyClass {
-
-public:
+ public:
   dynamicgraph::Vector &fun(dynamicgraph::Vector &res, double j) {
     res.resize(3);
     res.fill(j);
diff --git a/tests/sot/test_solverSoth.cpp b/tests/sot/test_solverSoth.cpp
index 5f9dd228..01531189 100644
--- a/tests/sot/test_solverSoth.cpp
+++ b/tests/sot/test_solverSoth.cpp
@@ -79,8 +79,7 @@ void parseTest(const std::string filename) {
     ee.resize(me);
     if (me > 0)
       for (int i = 0; i < me; ++i) {
-        for (int j = 0; j < nJ; ++j)
-          off >> Je(i, j);
+        for (int j = 0; j < nJ; ++j) off >> Je(i, j);
         off >> ee(i);
       }
 
@@ -97,8 +96,7 @@ void parseTest(const std::string filename) {
     eiBoundSide.resize(mi);
     if (mi > 0)
       for (int i = 0; i < mi; ++i) {
-        for (int j = 0; j < nJ; ++j)
-          off >> Ji(i, j);
+        for (int j = 0; j < nJ; ++j) off >> Ji(i, j);
         std::string number;
         eiBoundSide[i] = ConstraintMem::BOUND_VOID;
         off >> number;
@@ -257,17 +255,14 @@ void deparse(std::vector<bubMatrix> Jes, std::vector<bubVector> ees,
          << "equalities " << ee.size() << endl;
     if (ee.size() > 0)
       for (unsigned int i = 0; i < ee.size(); ++i) {
-        for (unsigned int j = 0; j < Je.size2(); ++j)
-          cout << Je(i, j) << " ";
+        for (unsigned int j = 0; j < Je.size2(); ++j) cout << Je(i, j) << " ";
         cout << "\t" << ee(i) << endl;
       }
 
     unsigned int nbIneq = 0;
     for (unsigned int i = 0; i < boundSide.size(); ++i) {
-      if (boundSide[i] & ConstraintMem::BOUND_INF)
-        nbIneq++;
-      if (boundSide[i] & ConstraintMem::BOUND_SUP)
-        nbIneq++;
+      if (boundSide[i] & ConstraintMem::BOUND_INF) nbIneq++;
+      if (boundSide[i] & ConstraintMem::BOUND_SUP) nbIneq++;
     }
 
     cout << endl << "inequalities " << nbIneq << endl;
@@ -280,8 +275,7 @@ void deparse(std::vector<bubMatrix> Jes, std::vector<bubVector> ees,
                << " X " << -eiInf(i) << endl;
         }
         if (boundSide[i] & ConstraintMem::BOUND_SUP) {
-          for (unsigned int j = 0; j < Ji.size2(); ++j)
-            cout << Ji(i, j) << " ";
+          for (unsigned int j = 0; j < Ji.size2(); ++j) cout << Ji(i, j) << " ";
           cout << "\t"
                << " X " << eiSup(i) << endl;
         }
@@ -339,8 +333,7 @@ void convertDoubleToSingle(const std::string filename) {
     ee.resize(me);
     if (me > 0)
       for (int i = 0; i < me; ++i) {
-        for (int j = 0; j < nJ; ++j)
-          off >> Je(i, j);
+        for (int j = 0; j < nJ; ++j) off >> Je(i, j);
         off >> ee(i);
       }
 
@@ -356,11 +349,10 @@ void convertDoubleToSingle(const std::string filename) {
     eiBoundSide.resize(mi);
     if (mi > 0)
       for (int i = 0; i < mi; ++i) {
-        for (int j = 0; j < nJ; ++j)
-          off >> Ji(i, j);
+        for (int j = 0; j < nJ; ++j) off >> Ji(i, j);
         std::string number;
         eiBoundSide[i] = ConstraintMem::BOUND_VOID;
-        off >> number; // std::cout << "toto '" << number << "'" << std::endl;
+        off >> number;  // std::cout << "toto '" << number << "'" << std::endl;
         if (number != "X") {
           eiBoundSide[i] = (ConstraintMem::BoundSideType)(
               eiBoundSide[i] | ConstraintMem::BOUND_INF);
@@ -426,7 +418,7 @@ void randTest(const unsigned int nJ, const bool enableSolve[]) {
   sotDEBUG(15) << "eiSup1 = " << (MATLAB)eiSup1 << std::endl;
   randBound(bound1, 3);
   randMatrix(Je1, 3,
-             nJ); // sotDEBUG(15) << "Je1 = " << (MATLAB)Je1 << std::endl;
+             nJ);  // sotDEBUG(15) << "Je1 = " << (MATLAB)Je1 << std::endl;
   randMatrix(Ji1, 3, nJ);
   sotDEBUG(15) << "Ji1 = " << (MATLAB)Ji1 << std::endl;
   bubMatrix xhi;
@@ -536,40 +528,35 @@ void randTest(const unsigned int nJ, const bool enableSolve[]) {
 
   /* ---------------------------------------------------------- */
 
-  if (enableSolve[0])
-    solver.solve(Je0, ee0, Ji0, eiInf0, eiSup0, bound0);
+  if (enableSolve[0]) solver.solve(Je0, ee0, Ji0, eiInf0, eiSup0, bound0);
   sotDEBUG(15) << "/* ----------------------------------------------------- */"
                << std::endl;
   sotDEBUG(15) << "/* ----------------------------------------------------- */"
                << std::endl;
   sotDEBUG(15) << "/* ----------------------------------------------------- */"
                << std::endl;
-  if (enableSolve[1])
-    solver.solve(Je1, ee1, Ji1, eiInf1, eiSup1, bound1);
+  if (enableSolve[1]) solver.solve(Je1, ee1, Ji1, eiInf1, eiSup1, bound1);
   sotDEBUG(15) << "/* ----------------------------------------------------- */"
                << std::endl;
   sotDEBUG(15) << "/* ----------------------------------------------------- */"
                << std::endl;
   sotDEBUG(15) << "/* ----------------------------------------------------- */"
                << std::endl;
-  if (enableSolve[2])
-    solver.solve(Je2, ee2, Ji2, eiInf2, eiSup2, bound2);
+  if (enableSolve[2]) solver.solve(Je2, ee2, Ji2, eiInf2, eiSup2, bound2);
   sotDEBUG(15) << "/* ----------------------------------------------------- */"
                << std::endl;
   sotDEBUG(15) << "/* ----------------------------------------------------- */"
                << std::endl;
   sotDEBUG(15) << "/* ----------------------------------------------------- */"
                << std::endl;
-  if (enableSolve[3])
-    solver.solve(Je3, ee3, Ji3, eiInf3, eiSup3, bound3);
+  if (enableSolve[3]) solver.solve(Je3, ee3, Ji3, eiInf3, eiSup3, bound3);
   sotDEBUG(15) << "/* ----------------------------------------------------- */"
                << std::endl;
   sotDEBUG(15) << "/* ----------------------------------------------------- */"
                << std::endl;
   sotDEBUG(15) << "/* ----------------------------------------------------- */"
                << std::endl;
-  if (enableSolve[4])
-    solver.solve(Je4, ee4, Ji4, eiInf4, eiSup4, bound4);
+  if (enableSolve[4]) solver.solve(Je4, ee4, Ji4, eiInf4, eiSup4, bound4);
 
   /* ---------------------------------------------------------- */
 
@@ -580,7 +567,6 @@ void randTest(const unsigned int nJ, const bool enableSolve[]) {
 /* ---------------------------------------------------------- */
 /* ---------------------------------------------------------- */
 int main(void) {
-
   //  convertDoubleToSingle("/home/nmansard/src/StackOfTasks/tests/tools/testFR.txt");
   //  exit(0);
 
diff --git a/tests/sot/tsot.cpp b/tests/sot/tsot.cpp
index 6f035940..03bf9522 100644
--- a/tests/sot/tsot.cpp
+++ b/tests/sot/tsot.cpp
@@ -13,6 +13,7 @@
 #include <iostream>
 //#include <sot/core/sot-h.hh>
 #include <dynamic-graph/linear-algebra.h>
+
 #include <sot/core/debug.hh>
 #include <sot/core/feature-abstract.hh>
 #include <sot/core/feature-visual-point.hh>
@@ -25,8 +26,7 @@ using namespace dynamicgraph::sot;
 double drand(void) { return 2 * ((double)rand()) / RAND_MAX - 1; }
 dynamicgraph::Matrix &mrand(dynamicgraph::Matrix &J) {
   for (int i = 0; i < J.rows(); ++i)
-    for (int j = 0; j < J.cols(); ++j)
-      J(i, j) = drand();
+    for (int j = 0; j < J.cols(); ++j) J(i, j) = drand();
   return J;
 }
 
diff --git a/tests/task/test_flags.cpp b/tests/task/test_flags.cpp
index f6661af5..5a26781c 100644
--- a/tests/task/test_flags.cpp
+++ b/tests/task/test_flags.cpp
@@ -68,8 +68,7 @@ int main(void) {
 
   cout << "f1 byte per byte:";
   for (int i = 0; i < 16; ++i) {
-    if (!(i % 8))
-      cout << " ";
+    if (!(i % 8)) cout << " ";
     cout << f1(i);
   }
   cout << endl;
diff --git a/tests/task/test_gain.cpp b/tests/task/test_gain.cpp
index da3c7933..1e9dec6a 100644
--- a/tests/task/test_gain.cpp
+++ b/tests/task/test_gain.cpp
@@ -13,6 +13,7 @@
 
 #include <dynamic-graph/linear-algebra.h>
 #include <dynamic-graph/signal.h>
+
 #include <iostream>
 #include <sot/core/gain-adaptive.hh>
 using namespace std;
@@ -20,7 +21,7 @@ using namespace dynamicgraph::sot;
 using namespace dynamicgraph;
 
 class DummyClass {
-public:
+ public:
   dynamicgraph::Vector err;
 
   dynamicgraph::Vector &getError(dynamicgraph::Vector &res, int t) {
diff --git a/tests/task/test_task.cpp b/tests/task/test_task.cpp
index b356db5f..96d017b2 100644
--- a/tests/task/test_task.cpp
+++ b/tests/task/test_task.cpp
@@ -10,9 +10,9 @@
 /* -------------------------------------------------------------------------- */
 /* --- INCLUDES ------------------------------------------------------------- */
 /* -------------------------------------------------------------------------- */
-#include <iostream>
-
 #include <dynamic-graph/linear-algebra.h>
+
+#include <iostream>
 #include <sot/core/debug.hh>
 #include <sot/core/feature-abstract.hh>
 #include <sot/core/feature-visual-point.hh>
@@ -25,8 +25,7 @@ using namespace dynamicgraph::sot;
 double drand(void) { return 2 * ((double)rand()) / RAND_MAX - 1; }
 dynamicgraph::Matrix &mrand(dynamicgraph::Matrix &J) {
   for (int i = 0; i < J.rows(); ++i)
-    for (int j = 0; j < J.cols(); ++j)
-      J(i, j) = drand();
+    for (int j = 0; j < J.cols(); ++j) J(i, j) = drand();
   return J;
 }
 
diff --git a/tests/tools/dummy-sot-external-interface.cc b/tests/tools/dummy-sot-external-interface.cc
index 3386add6..de11b205 100644
--- a/tests/tools/dummy-sot-external-interface.cc
+++ b/tests/tools/dummy-sot-external-interface.cc
@@ -9,11 +9,11 @@
 /* --- INCLUDES ------------------------------------------------------------- */
 /* -------------------------------------------------------------------------- */
 
+#include "dummy-sot-external-interface.hh"
+
 #include <iostream>
 #include <sot/core/debug.hh>
 
-#include "dummy-sot-external-interface.hh"
-
 using namespace std;
 using namespace dynamicgraph::sot;
 
@@ -63,4 +63,4 @@ void destroySotExternalInterface(
     dynamicgraph::sot::AbstractSotExternalInterface *p) {
   delete p;
 }
-}
\ No newline at end of file
+}
diff --git a/tests/tools/dummy-sot-external-interface.hh b/tests/tools/dummy-sot-external-interface.hh
index 8ad1ddd7..ae32ba83 100644
--- a/tests/tools/dummy-sot-external-interface.hh
+++ b/tests/tools/dummy-sot-external-interface.hh
@@ -16,7 +16,7 @@
 
 class DummySotExternalInterface
     : public dynamicgraph::sot::AbstractSotExternalInterface {
-public:
+ public:
   DummySotExternalInterface(){};
 
   virtual ~DummySotExternalInterface(){};
@@ -35,7 +35,7 @@ public:
   virtual void setSecondOrderIntegration(void);
   virtual void setNoIntegration(void);
 
-public:
+ public:
   bool second_integration_;
 };
 
diff --git a/tests/tools/plugin.cc b/tests/tools/plugin.cc
index 18db7fc5..fc20ef52 100644
--- a/tests/tools/plugin.cc
+++ b/tests/tools/plugin.cc
@@ -14,19 +14,19 @@
 // POSIX.1-2001
 #include <dlfcn.h>
 
-#include "plugin.hh"
 #include <sot/core/abstract-sot-external-interface.hh>
 #include <sot/core/debug.hh>
 
+#include "plugin.hh"
+
 using namespace std;
 using namespace dynamicgraph::sot;
 
 class Plugin : public PluginAbstract {
-
-protected:
+ protected:
   AbstractSotExternalInterface *sotController_;
 
-public:
+ public:
   Plugin(){};
   ~Plugin(){};
 
diff --git a/tests/tools/plugin.hh b/tests/tools/plugin.hh
index 8c6b819c..ce5bb4e3 100644
--- a/tests/tools/plugin.hh
+++ b/tests/tools/plugin.hh
@@ -2,7 +2,7 @@
 #define _PLUGIN_HH_
 
 class PluginAbstract {
-public:
+ public:
   PluginAbstract(){};
   virtual ~PluginAbstract(){};
   virtual void Initialization(std::string &astr) = 0;
diff --git a/tests/tools/test_abstract_interface.cpp b/tests/tools/test_abstract_interface.cpp
index 7b85553e..c9337eb1 100644
--- a/tests/tools/test_abstract_interface.cpp
+++ b/tests/tools/test_abstract_interface.cpp
@@ -15,22 +15,21 @@
 #include <dlfcn.h>
 
 #include <boost/program_options.hpp>
+#include <sot/core/debug.hh>
 
 #include "plugin.hh"
-#include <sot/core/debug.hh>
 
 using namespace std;
 using namespace dynamicgraph::sot;
 namespace po = boost::program_options;
 
 class PluginLoader {
-
-protected:
+ protected:
   PluginAbstract *sotController_;
   po::variables_map vm_;
   std::string dynamicLibraryName_;
 
-public:
+ public:
   PluginLoader(){};
   ~PluginLoader(){};
 
@@ -57,7 +56,6 @@ public:
   }
 
   void Initialization() {
-
     // Load the SotRobotBipedController library.
     void *SotRobotControllerLibrary =
         dlopen("libpluginabstract.so", RTLD_LAZY | RTLD_LOCAL);
diff --git a/tests/tools/test_boost.cpp b/tests/tools/test_boost.cpp
index 85e2e771..00888355 100644
--- a/tests/tools/test_boost.cpp
+++ b/tests/tools/test_boost.cpp
@@ -11,6 +11,7 @@
 #include <sys/time.h>
 #endif
 #include <dynamic-graph/linear-algebra.h>
+
 #include <iostream>
 #include <sot/core/debug.hh>
 #include <sot/core/matrix-geometry.hh>
@@ -27,12 +28,12 @@
 using namespace dynamicgraph::sot;
 using namespace std;
 
-#define INIT_CHRONO(name)                                                      \
-  struct timeval t0##_##name, t1##_##name;                                     \
+#define INIT_CHRONO(name)                  \
+  struct timeval t0##_##name, t1##_##name; \
   double dt##_##name
-#define START_CHRONO(name)                                                     \
-  gettimeofday(&t0##_##name, NULL);                                            \
-  sotDEBUG(25) << "t0 " << #name << ": " << t0##_##name.tv_sec << " - "        \
+#define START_CHRONO(name)                                              \
+  gettimeofday(&t0##_##name, NULL);                                     \
+  sotDEBUG(25) << "t0 " << #name << ": " << t0##_##name.tv_sec << " - " \
                << t0##_##name.tv_usec << std::endl
 #define STOP_CHRONO(name, commentaire)                                         \
   gettimeofday(&t1##_##name, NULL);                                            \
@@ -124,17 +125,14 @@ double timerCounter;
 /* ----------------------------------------------------------------------- */
 
 int main(int argc, char **argv) {
-  if (sotDEBUG_ENABLE(1))
-    DebugTrace::openFile();
+  if (sotDEBUG_ENABLE(1)) DebugTrace::openFile();
 
   //   const unsigned int r=1;
   //   const unsigned int c=30;
   unsigned int r = 1;
-  if (argc > 1)
-    r = atoi(argv[1]);
+  if (argc > 1) r = atoi(argv[1]);
   unsigned int c = 30;
-  if (argc > 2)
-    c = atoi(argv[2]);
+  if (argc > 2) c = atoi(argv[2]);
   static const int BENCH = 100;
 
   dynamicgraph::Matrix M(r, c);
@@ -146,8 +144,7 @@ int main(int argc, char **argv) {
   unsigned int nbzeros = 0;
   for (unsigned int j = 0; j < c; ++j) {
     if ((rand() + 1.) / RAND_MAX > .8) {
-      for (unsigned int i = 0; i < r; ++i)
-        M(i, j) = 0.;
+      for (unsigned int i = 0; i < r; ++i) M(i, j) = 0.;
       nbzeros++;
     } else
       for (unsigned int i = 0; i < r; ++i)
@@ -155,7 +152,7 @@ int main(int argc, char **argv) {
   }
   for (unsigned int i = 0; i < r; ++i)
     for (unsigned int j = 0; j < c; ++j)
-      M1(i, j) = M(i, j); //+ ((rand()+1.) / RAND_MAX*2-1) * 1e-28 ;
+      M1(i, j) = M(i, j);  //+ ((rand()+1.) / RAND_MAX*2-1) * 1e-28 ;
 
   // sotDEBUG(15) << dynamicgraph::MATLAB <<"M = "<< M <<endl;
   sotDEBUG(15) << "M1 = " << M1 << endl;
@@ -164,14 +161,12 @@ int main(int argc, char **argv) {
   INIT_CHRONO(inv);
 
   START_CHRONO(inv);
-  for (int i = 0; i < BENCH; ++i)
-    dynamicgraph::pseudoInverse(M, Minv);
+  for (int i = 0; i < BENCH; ++i) dynamicgraph::pseudoInverse(M, Minv);
   STOP_CHRONO(inv, "init");
   sotDEBUG(15) << "Minv = " << Minv << endl;
 
   START_CHRONO(inv);
-  for (int i = 0; i < BENCH; ++i)
-    dynamicgraph::pseudoInverse(M, Minv);
+  for (int i = 0; i < BENCH; ++i) dynamicgraph::pseudoInverse(M, Minv);
   STOP_CHRONO(inv, "M+standard");
   cout << dt_inv << endl;
 
@@ -201,15 +196,13 @@ int main(int argc, char **argv) {
   dynamicgraph::Matrix Mcreuse;
   dynamicgraph::Matrix Mcreuseinv;
   for (int ib = 0; ib < BENCH; ++ib) {
-
     double sumsq;
     unsigned int parc = 0;
     if (!ib) {
       nonzeros.clear();
       for (unsigned int j = 0; j < c; ++j) {
         sumsq = 0.;
-        for (unsigned int i = 0; i < r; ++i)
-          sumsq += M(i, j) * M(i, j);
+        for (unsigned int i = 0; i < r; ++i) sumsq += M(i, j) * M(i, j);
         if (sumsq > 1e-6) {
           nonzeros.push_back(j);
           parc++;
@@ -237,8 +230,7 @@ int main(int argc, char **argv) {
     Minv.fill(0.);
     for (std::list<unsigned int>::iterator iter = nonzeros.begin();
          iter != nonzeros.end(); ++iter) {
-      for (unsigned int i = 0; i < r; ++i)
-        Minv(*iter, i) = Mcreuseinv(parc, i);
+      for (unsigned int i = 0; i < r; ++i) Minv(*iter, i) = Mcreuseinv(parc, i);
       parc++;
     }
 
@@ -254,14 +246,12 @@ int main(int argc, char **argv) {
   // sotDEBUG(15) << dynamicgraph::MATLAB <<"Minv = "<< Minv <<endl;
 
   {
-
     double sumsq;
     nonzeros.clear();
     unsigned int parc = 0;
     for (unsigned int j = 0; j < c; ++j) {
       sumsq = 0.;
-      for (unsigned int i = 0; i < r; ++i)
-        sumsq += M(i, j) * M(i, j);
+      for (unsigned int i = 0; i < r; ++i) sumsq += M(i, j) * M(i, j);
       if (sumsq > 1e-6) {
         nonzeros.push_back(j);
         parc++;
@@ -289,8 +279,7 @@ int main(int argc, char **argv) {
     Minv.fill(0.);
     for (std::list<unsigned int>::iterator iter = nonzeros.begin();
          iter != nonzeros.end(); ++iter) {
-      for (unsigned int i = 0; i < r; ++i)
-        Minv(*iter, i) = Mcreuseinv(parc, i);
+      for (unsigned int i = 0; i < r; ++i) Minv(*iter, i) = Mcreuseinv(parc, i);
       parc++;
     }
 
diff --git a/tests/tools/test_control_pd.cpp b/tests/tools/test_control_pd.cpp
index ef26fb6f..1f20f3db 100644
--- a/tests/tools/test_control_pd.cpp
+++ b/tests/tools/test_control_pd.cpp
@@ -17,6 +17,7 @@ using namespace std;
 
 #include <dynamic-graph/entity.h>
 #include <dynamic-graph/factory.h>
+
 #include <sot/core/control-pd.hh>
 #include <sstream>
 
diff --git a/tests/tools/test_device.cpp b/tests/tools/test_device.cpp
index a2edb35b..2562d789 100644
--- a/tests/tools/test_device.cpp
+++ b/tests/tools/test_device.cpp
@@ -6,9 +6,8 @@
  *
  */
 
-#include <pinocchio/multibody/liegroup/special-euclidean.hpp>
-
 #include <iostream>
+#include <pinocchio/multibody/liegroup/special-euclidean.hpp>
 #include <sot/core/debug.hh>
 
 #ifndef WIN32
@@ -17,9 +16,10 @@
 
 using namespace std;
 
-#include <boost/test/unit_test.hpp>
 #include <dynamic-graph/entity.h>
 #include <dynamic-graph/factory.h>
+
+#include <boost/test/unit_test.hpp>
 #include <sot/core/device.hh>
 #include <sstream>
 
@@ -28,7 +28,7 @@ using namespace dynamicgraph::sot;
 namespace dg = dynamicgraph;
 
 class TestDevice : public dg::sot::Device {
-public:
+ public:
   TestDevice(const std::string &RobotName) : Device(RobotName) {
     timestep_ = 0.001;
   }
@@ -36,7 +36,6 @@ public:
 };
 
 BOOST_AUTO_TEST_CASE(test_device) {
-
   TestDevice aDevice(std::string("simple_humanoid"));
 
   /// Fix constant vector for the control entry in position
@@ -62,7 +61,7 @@ BOOST_AUTO_TEST_CASE(test_device) {
     aControlVector(i) = 0.1;
   }
 
-  dg::Vector expected = aStateVector; // backup initial state vector
+  dg::Vector expected = aStateVector;  // backup initial state vector
 
   /// Specify state size
   aDevice.setStateSize(38);
@@ -75,7 +74,7 @@ BOOST_AUTO_TEST_CASE(test_device) {
   /// Specify velocity bounds
   aDevice.setVelocityBounds(aLowerVelBound, anUpperVelBound);
   /// Specify current state value
-  aDevice.setState(aStateVector); // entry signal in position
+  aDevice.setState(aStateVector);  // entry signal in position
   /// Specify constant control value
   aDevice.controlSIN.setConstant(aControlVector);
 
@@ -118,8 +117,7 @@ BOOST_AUTO_TEST_CASE(test_device) {
                                .toRotationMatrix()
                                .eulerAngles(2, 1, 0)
                                .reverse();
-  for (int i = 6; i < expected.size(); i++)
-    expected[i] = 0.3;
+  for (int i = 6; i < expected.size(); i++) expected[i] = 0.3;
 
   std::cout << expected.transpose() << std::endl;
   std::cout << aDevice.stateSOUT(N).transpose() << std::endl;
diff --git a/tests/tools/test_mailbox.cpp b/tests/tools/test_mailbox.cpp
index 256c51ea..3c059f22 100644
--- a/tests/tools/test_mailbox.cpp
+++ b/tests/tools/test_mailbox.cpp
@@ -18,6 +18,7 @@ using namespace std;
 
 #include <dynamic-graph/entity.h>
 #include <dynamic-graph/factory.h>
+
 #include <sot/core/feature-abstract.hh>
 #include <sot/core/mailbox-vector.hh>
 #include <sstream>
@@ -34,8 +35,7 @@ void f(void) {
   Vector vect2(25);
   for (int i = 0; i < 250; ++i) {
     std::cout << " iter  " << i << std::endl;
-    for (int j = 0; j < 25; ++j)
-      vect(j) = j + i * 10;
+    for (int j = 0; j < 25; ++j) vect(j) = j + i * 10;
     mailbox->post(vect);
     Vector V = mailbox->getObject(vect2, 1);
     std::cout << vect2 << std::endl;
diff --git a/tests/tools/test_matrix.cpp b/tests/tools/test_matrix.cpp
index bcfefb9a..7f6e8c70 100644
--- a/tests/tools/test_matrix.cpp
+++ b/tests/tools/test_matrix.cpp
@@ -12,10 +12,10 @@
 /* -------------------------------------------------------------------------- */
 
 #include <dynamic-graph/linear-algebra.h>
-#include <sot/core/debug.hh>
-#include <sot/core/feature-abstract.hh>
 
 #include <iostream>
+#include <sot/core/debug.hh>
+#include <sot/core/feature-abstract.hh>
 using namespace std;
 
 #include <sot/core/sot.hh>
@@ -26,10 +26,10 @@ using namespace std;
 #include <sot/core/utils-windows.hh>
 #endif /*WIN32*/
 
-#define sotCHRONO1                                                             \
-  gettimeofday(&t1, NULL);                                                     \
-  dt = ((t1.tv_sec - t0.tv_sec) * 1000. +                                      \
-        (t1.tv_usec - t0.tv_usec + 0.) / 1000.);                               \
+#define sotCHRONO1                               \
+  gettimeofday(&t1, NULL);                       \
+  dt = ((t1.tv_sec - t0.tv_sec) * 1000. +        \
+        (t1.tv_usec - t0.tv_usec + 0.) / 1000.); \
   cout << "dt: " << dt
 
 int main(int, char **) {
@@ -42,11 +42,9 @@ int main(int, char **) {
   dynamicgraph::Matrix J(6, 40);
   dynamicgraph::Matrix JK(6, 40);
   for (int i = 0; i < 40; ++i)
-    for (int j = 0; j < 40; ++j)
-      P(i, j) = (rand() + 1.) / RAND_MAX;
+    for (int j = 0; j < 40; ++j) P(i, j) = (rand() + 1.) / RAND_MAX;
   for (int i = 0; i < J.rows(); ++i)
-    for (int j = 0; j < J.cols(); ++j)
-      J(i, j) = (rand() + 1.) / RAND_MAX;
+    for (int j = 0; j < J.cols(); ++j) J(i, j) = (rand() + 1.) / RAND_MAX;
 
   int nbIter = 100000;
   dt = 0;
diff --git a/tests/tools/test_robot_utils.cpp b/tests/tools/test_robot_utils.cpp
index 47169e8f..eceb81e3 100644
--- a/tests/tools/test_robot_utils.cpp
+++ b/tests/tools/test_robot_utils.cpp
@@ -10,6 +10,7 @@
 /* --- INCLUDES ------------------------------------------------------------- */
 /* -------------------------------------------------------------------------- */
 #include <dynamic-graph/factory.h>
+
 #include <iostream>
 #include <sot/core/debug.hh>
 #include <sot/core/robot-utils.hh>
diff --git a/tests/tools/test_sot_loader.cpp b/tests/tools/test_sot_loader.cpp
index b388da22..994f0e8c 100644
--- a/tests/tools/test_sot_loader.cpp
+++ b/tests/tools/test_sot_loader.cpp
@@ -8,15 +8,14 @@
  */
 
 #define BOOST_TEST_MODULE test_sot_loader
-#include <boost/test/included/unit_test.hpp>
-
-#include <fstream>
-#include <iostream>
-
 #include <dynamic-graph/entity.h>
 #include <dynamic-graph/factory.h>
 #include <dynamic-graph/pool.h>
 
+#include <boost/test/included/unit_test.hpp>
+#include <fstream>
+#include <iostream>
+
 #include "sot/core/debug.hh"
 #include "sot/core/device.hh"
 #include "sot/core/sot-loader.hh"
@@ -26,7 +25,7 @@ using namespace dynamicgraph::sot;
 namespace dg = dynamicgraph;
 
 class TestDevice : public dg::sot::Device {
-public:
+ public:
   TestDevice(const std::string &RobotName) : Device(RobotName) {
     timestep_ = 0.001;
   }
@@ -162,9 +161,10 @@ BOOST_FIXTURE_TEST_CASE(test_run_python_command_error, TestFixture) {
   std::cout << std::quoted(err) << std::endl;
   BOOST_CHECK_EQUAL(res, "");
   BOOST_CHECK_EQUAL(out, "");
-  BOOST_CHECK_EQUAL(err, "Traceback (most recent call last):\n"
-                         "  File \"<string>\", line 1, in <module>\n"
-                         "NameError: name 'a' is not defined\n");
+  BOOST_CHECK_EQUAL(err,
+                    "Traceback (most recent call last):\n"
+                    "  File \"<string>\", line 1, in <module>\n"
+                    "NameError: name 'a' is not defined\n");
 }
 
 BOOST_FIXTURE_TEST_CASE(test_run_python_scripts, TestFixture) {
@@ -182,12 +182,13 @@ BOOST_FIXTURE_TEST_CASE(test_run_python_scripts_failure, TestFixture) {
   sot_loader.initialization();
   std::string err;
   sot_loader.runPythonFile(bad_python_script_, err);
-  BOOST_CHECK_EQUAL(err, "Traceback (most recent call last):\n"
-                         "  File \"" +
-                             bad_python_script_ +
-                             "\", line 2, in <module>\n"
-                             "    print(b)\n"
-                             "NameError: name 'b' is not defined\n");
+  BOOST_CHECK_EQUAL(err,
+                    "Traceback (most recent call last):\n"
+                    "  File \"" +
+                        bad_python_script_ +
+                        "\", line 2, in <module>\n"
+                        "    print(b)\n"
+                        "NameError: name 'b' is not defined\n");
 }
 
 BOOST_FIXTURE_TEST_CASE(test_load_device_in_python, TestFixture) {
diff --git a/tests/traces/files.cpp b/tests/traces/files.cpp
index 9e6bb176..d3f88659 100644
--- a/tests/traces/files.cpp
+++ b/tests/traces/files.cpp
@@ -7,16 +7,14 @@
  *
  */
 
-#include <iostream>
-#include <sot/core/debug.hh>
-
 #include <boost/filesystem/operations.hpp>
 #include <boost/filesystem/path.hpp>
+#include <iostream>
+#include <sot/core/debug.hh>
 
 using namespace std;
 
 int main() {
-
   boost::filesystem::create_directory("foobar");
   ofstream file("foobar/cheeze");
   file << "tastes good!\n";
diff --git a/tests/traces/test_traces.cpp b/tests/traces/test_traces.cpp
index 74edac2b..1917da71 100644
--- a/tests/traces/test_traces.cpp
+++ b/tests/traces/test_traces.cpp
@@ -7,13 +7,13 @@
  *
  */
 
-#include <iostream>
-
 #include <dynamic-graph/linear-algebra.h>
 #include <dynamic-graph/signal-base.h>
 #include <dynamic-graph/signal-time-dependent.h>
 #include <dynamic-graph/signal.h>
 #include <dynamic-graph/tracer.h>
+
+#include <iostream>
 #include <sot/core/debug.hh>
 
 using namespace std;
-- 
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